A. D. Klose and E. W. Larsen, "Light transport in biological tissue based on the simplified spherical harmonics equations," J. Comput. Phys. 220, 441-470 (2006).

[Crossref]

W. Han, W. Cong, and G. Wang, "Mathematical theory and numerical analysis of bioluminescence tomography," Inverse Probl. 22, 1659-1675 (2006).

[Crossref]

H. Dehghani, S. C. Davis, S. Jiang, B. W. Pogue, and K. D. Paulsen, "Spectrally resolved bioluminescence optical tomography," Opt. Lett. 31, 365-367 (2006).

[Crossref]
[PubMed]

W. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. V. Wang, E. A. Hoffman, G. McLennan, P. B. McCray, J. Zabner, and A. Cong, "Practical reconstruction method for bioluminescence tomography," Opt. Express 13, 6756-6771 (2005).

[Crossref]
[PubMed]

A. D. Klose, V. Ntziachristos, and A.H. Hielscher, "The inverse source problem based on the radiative transfer equation in optical molecular imaging," J. Comput. Phys. 202, 323-345 (2005).

[Crossref]

J. J. J. Dirckx, L. C. Kuypers, and W. F. Decraemer, "Refractive index of tissue measured," J. Biomed. Opt. 10, 044014 (2005).

[Crossref]

G. Alexandrakis, F. R. Rannou, and A. F. Chatziioannou, "Tomographic bioluminescence imaging by use of a combined optical-PET (OPET) system: a computer simulation feasibility study," Phys. Med. Biol. 50, 4225-4241 (2005).

[Crossref]
[PubMed]

A. J. Chaudhari, F. Darvas, J. R. Bading, R. A. Moats, P. S. Conti, D. J. Smith, S. R. Cherry, and R. M. Leahy, "Hyperspectral and multispectral bioluminescence optical tomography for small animal imaging," Phys. Med. Biol. 50, 5421-5441 (2005).

[Crossref]
[PubMed]

D. K. Welsh and S. A. Kay, "Bioluminescence imaging in living organisms," Curr. Opin. Biotechnol. 16, 73-78 (2005).

[Crossref]
[PubMed]

H. Zhao, T. C. Doyle, O. Coquoz, F. Kalish, B. W. Rice, and C. H. Contag, "Emission spectra of bioluminescent reporters and interaction with mammalian tissue determine the sensitivity of detection in vivo," J. Biomed. Opt. 10, 041210-01 (2005).

[Crossref]

G. Wang, Y. Li, and M. Jiang, "Uniqueness theorems in bioluminescence tomography," Med. Phys. 31, 2289-2299 (2004).

[Crossref]
[PubMed]

T. Troy, D. Jekic-McMullen, L. Sambucetti, and B. Rice, "Quantitative comparison of the sensitivity of detection of fluorescent and bioluminescent reporters in animal models," Mol. Imaging 3, 9-23 (2004).

[Crossref]
[PubMed]

A. D. Klose, V. Ntziachristos, and A. H. Hielscher, "In vivo fluorescence molecular imaging with a radiative transfer model," Mol. Imaging 3, 230 (2004).

R. Elaloufi, R. Carminati, and J.-J. Greffet, "Time-dependent transport through scattering media: from radiative transfer to diffusion," J. Opt. Soc. Am. A 4, S103-S108 (2002).

E. D. Aydin, C. R. E. de Oliveira, and A. J. H. Goddard, "A comparison between transport and diffusion calculations using a finite element-spherical harmonics radiation transport method," Med. Phys. 29, 2013-2023 (2002).

[Crossref]
[PubMed]

H.-G. Beyer and H.-P. Schwefel, "Evolution strategies," Nat. Comput. 1, 3-52 (2002).

[Crossref]

B. W. Rice, M. D. Cable, and M. B. Nelson, "In vivo imaging of light-emitting probes," J. Biomed. Opt. 6, 432-440 (2001).

[Crossref]
[PubMed]

B. Chen, K. Stamnes, and J. J. Stamnes, "Validity of the diffusion approximation in bio-optical imaging," Appl. Opt. 40, 6356-6366 (2001).

[Crossref]

A. D. Kim and A. Ishimaru, "Optical diffusion of continuous-wave, pulsed, and density waves in scattering media and comparisons with radiative transfer," Appl. Opt. 37, 5313-5319 (1998).

[Crossref]

A. M. Hielscher, R. E. Alcouffe, and R. L. Barbour, "Comparison of finite-difference transport and diffusion calculations for photon migration in homogeneous and heterogeneous tissues," Phys. Med. Biol. 43, 1285-1302 (1998).

[Crossref]
[PubMed]

C. E. Siewert, "A radiative-transfer inverse-source problem for a sphere," J. Quant. Spectrosc. Radiat. Transf. 52, 157-160 (1994).

[Crossref]

C. E. Siewert, "An inverse source problem in radiative transfer," J. Quant. Spectrosc. Radiat. Transf. 50, 603-609 (1993).

[Crossref]

W. F. Cheong, S. A. Prahl, and A. J. Welch, "A review of the optical properties of biological tissue," IEEE J. Quantum Electron. 26, 2166-2185 (1990).

[Crossref]

S. Kirkpatrick, C. D. Gelatt, Jr., and M. P. Vecchi, "Optimization by simulated annealing," Science 220, 671-680 (1983).

[Crossref]
[PubMed]

E. W. Larsen, "The inverse source problem in radiative transfer," J. Quant. Spectrosc. Radiat. Transf. 15, 1-5 (1975).

[Crossref]

N. Metropolis, A. Rosenbluth, M. Rosenbluth, A. Teller, and E. Teller, "Equation of state calculations by fast computing machines," J. Chem. Phys. 21, 1087-1092 (1953).

[Crossref]

A. M. Hielscher, R. E. Alcouffe, and R. L. Barbour, "Comparison of finite-difference transport and diffusion calculations for photon migration in homogeneous and heterogeneous tissues," Phys. Med. Biol. 43, 1285-1302 (1998).

[Crossref]
[PubMed]

G. Alexandrakis, F. R. Rannou, and A. F. Chatziioannou, "Tomographic bioluminescence imaging by use of a combined optical-PET (OPET) system: a computer simulation feasibility study," Phys. Med. Biol. 50, 4225-4241 (2005).

[Crossref]
[PubMed]

E. D. Aydin, C. R. E. de Oliveira, and A. J. H. Goddard, "A comparison between transport and diffusion calculations using a finite element-spherical harmonics radiation transport method," Med. Phys. 29, 2013-2023 (2002).

[Crossref]
[PubMed]

A. J. Chaudhari, F. Darvas, J. R. Bading, R. A. Moats, P. S. Conti, D. J. Smith, S. R. Cherry, and R. M. Leahy, "Hyperspectral and multispectral bioluminescence optical tomography for small animal imaging," Phys. Med. Biol. 50, 5421-5441 (2005).

[Crossref]
[PubMed]

G. Bal and A. Tamasan, "Inverse source problem in transport equations" (manuscript in preparation).

A. M. Hielscher, R. E. Alcouffe, and R. L. Barbour, "Comparison of finite-difference transport and diffusion calculations for photon migration in homogeneous and heterogeneous tissues," Phys. Med. Biol. 43, 1285-1302 (1998).

[Crossref]
[PubMed]

H.-G. Beyer and H.-P. Schwefel, "Evolution strategies," Nat. Comput. 1, 3-52 (2002).

[Crossref]

B. W. Rice, M. D. Cable, and M. B. Nelson, "In vivo imaging of light-emitting probes," J. Biomed. Opt. 6, 432-440 (2001).

[Crossref]
[PubMed]

R. Elaloufi, R. Carminati, and J.-J. Greffet, "Time-dependent transport through scattering media: from radiative transfer to diffusion," J. Opt. Soc. Am. A 4, S103-S108 (2002).

G. Alexandrakis, F. R. Rannou, and A. F. Chatziioannou, "Tomographic bioluminescence imaging by use of a combined optical-PET (OPET) system: a computer simulation feasibility study," Phys. Med. Biol. 50, 4225-4241 (2005).

[Crossref]
[PubMed]

A. J. Chaudhari, F. Darvas, J. R. Bading, R. A. Moats, P. S. Conti, D. J. Smith, S. R. Cherry, and R. M. Leahy, "Hyperspectral and multispectral bioluminescence optical tomography for small animal imaging," Phys. Med. Biol. 50, 5421-5441 (2005).

[Crossref]
[PubMed]

W. F. Cheong, S. A. Prahl, and A. J. Welch, "A review of the optical properties of biological tissue," IEEE J. Quantum Electron. 26, 2166-2185 (1990).

[Crossref]

A. J. Chaudhari, F. Darvas, J. R. Bading, R. A. Moats, P. S. Conti, D. J. Smith, S. R. Cherry, and R. M. Leahy, "Hyperspectral and multispectral bioluminescence optical tomography for small animal imaging," Phys. Med. Biol. 50, 5421-5441 (2005).

[Crossref]
[PubMed]

W. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. V. Wang, E. A. Hoffman, G. McLennan, P. B. McCray, J. Zabner, and A. Cong, "Practical reconstruction method for bioluminescence tomography," Opt. Express 13, 6756-6771 (2005).

[Crossref]
[PubMed]

W. Han, W. Cong, and G. Wang, "Mathematical theory and numerical analysis of bioluminescence tomography," Inverse Probl. 22, 1659-1675 (2006).

[Crossref]

W. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. V. Wang, E. A. Hoffman, G. McLennan, P. B. McCray, J. Zabner, and A. Cong, "Practical reconstruction method for bioluminescence tomography," Opt. Express 13, 6756-6771 (2005).

[Crossref]
[PubMed]

H. Zhao, T. C. Doyle, O. Coquoz, F. Kalish, B. W. Rice, and C. H. Contag, "Emission spectra of bioluminescent reporters and interaction with mammalian tissue determine the sensitivity of detection in vivo," J. Biomed. Opt. 10, 041210-01 (2005).

[Crossref]

A. J. Chaudhari, F. Darvas, J. R. Bading, R. A. Moats, P. S. Conti, D. J. Smith, S. R. Cherry, and R. M. Leahy, "Hyperspectral and multispectral bioluminescence optical tomography for small animal imaging," Phys. Med. Biol. 50, 5421-5441 (2005).

[Crossref]
[PubMed]

H. Zhao, T. C. Doyle, O. Coquoz, F. Kalish, B. W. Rice, and C. H. Contag, "Emission spectra of bioluminescent reporters and interaction with mammalian tissue determine the sensitivity of detection in vivo," J. Biomed. Opt. 10, 041210-01 (2005).

[Crossref]

A. J. Chaudhari, F. Darvas, J. R. Bading, R. A. Moats, P. S. Conti, D. J. Smith, S. R. Cherry, and R. M. Leahy, "Hyperspectral and multispectral bioluminescence optical tomography for small animal imaging," Phys. Med. Biol. 50, 5421-5441 (2005).

[Crossref]
[PubMed]

E. D. Aydin, C. R. E. de Oliveira, and A. J. H. Goddard, "A comparison between transport and diffusion calculations using a finite element-spherical harmonics radiation transport method," Med. Phys. 29, 2013-2023 (2002).

[Crossref]
[PubMed]

J. J. J. Dirckx, L. C. Kuypers, and W. F. Decraemer, "Refractive index of tissue measured," J. Biomed. Opt. 10, 044014 (2005).

[Crossref]

J. J. J. Dirckx, L. C. Kuypers, and W. F. Decraemer, "Refractive index of tissue measured," J. Biomed. Opt. 10, 044014 (2005).

[Crossref]

H. Zhao, T. C. Doyle, O. Coquoz, F. Kalish, B. W. Rice, and C. H. Contag, "Emission spectra of bioluminescent reporters and interaction with mammalian tissue determine the sensitivity of detection in vivo," J. Biomed. Opt. 10, 041210-01 (2005).

[Crossref]

R. Elaloufi, R. Carminati, and J.-J. Greffet, "Time-dependent transport through scattering media: from radiative transfer to diffusion," J. Opt. Soc. Am. A 4, S103-S108 (2002).

S. Kirkpatrick, C. D. Gelatt, Jr., and M. P. Vecchi, "Optimization by simulated annealing," Science 220, 671-680 (1983).

[Crossref]
[PubMed]

E. D. Aydin, C. R. E. de Oliveira, and A. J. H. Goddard, "A comparison between transport and diffusion calculations using a finite element-spherical harmonics radiation transport method," Med. Phys. 29, 2013-2023 (2002).

[Crossref]
[PubMed]

R. Elaloufi, R. Carminati, and J.-J. Greffet, "Time-dependent transport through scattering media: from radiative transfer to diffusion," J. Opt. Soc. Am. A 4, S103-S108 (2002).

W. Han, W. Cong, and G. Wang, "Mathematical theory and numerical analysis of bioluminescence tomography," Inverse Probl. 22, 1659-1675 (2006).

[Crossref]

A. D. Klose, V. Ntziachristos, and A.H. Hielscher, "The inverse source problem based on the radiative transfer equation in optical molecular imaging," J. Comput. Phys. 202, 323-345 (2005).

[Crossref]

A. D. Klose, V. Ntziachristos, and A. H. Hielscher, "In vivo fluorescence molecular imaging with a radiative transfer model," Mol. Imaging 3, 230 (2004).

A. H. Hielscher, A. D. Klose, and J. Beuthan, "Evolution strategies for optical tomographic characterization of homogeneous media," Opt. Express 7, 507-518 (2000).

[Crossref]
[PubMed]

A. M. Hielscher, R. E. Alcouffe, and R. L. Barbour, "Comparison of finite-difference transport and diffusion calculations for photon migration in homogeneous and heterogeneous tissues," Phys. Med. Biol. 43, 1285-1302 (1998).

[Crossref]
[PubMed]

W. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. V. Wang, E. A. Hoffman, G. McLennan, P. B. McCray, J. Zabner, and A. Cong, "Practical reconstruction method for bioluminescence tomography," Opt. Express 13, 6756-6771 (2005).

[Crossref]
[PubMed]

T. Troy, D. Jekic-McMullen, L. Sambucetti, and B. Rice, "Quantitative comparison of the sensitivity of detection of fluorescent and bioluminescent reporters in animal models," Mol. Imaging 3, 9-23 (2004).

[Crossref]
[PubMed]

W. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. V. Wang, E. A. Hoffman, G. McLennan, P. B. McCray, J. Zabner, and A. Cong, "Practical reconstruction method for bioluminescence tomography," Opt. Express 13, 6756-6771 (2005).

[Crossref]
[PubMed]

G. Wang, Y. Li, and M. Jiang, "Uniqueness theorems in bioluminescence tomography," Med. Phys. 31, 2289-2299 (2004).

[Crossref]
[PubMed]

H. Zhao, T. C. Doyle, O. Coquoz, F. Kalish, B. W. Rice, and C. H. Contag, "Emission spectra of bioluminescent reporters and interaction with mammalian tissue determine the sensitivity of detection in vivo," J. Biomed. Opt. 10, 041210-01 (2005).

[Crossref]

D. K. Welsh and S. A. Kay, "Bioluminescence imaging in living organisms," Curr. Opin. Biotechnol. 16, 73-78 (2005).

[Crossref]
[PubMed]

S. Kirkpatrick, C. D. Gelatt, Jr., and M. P. Vecchi, "Optimization by simulated annealing," Science 220, 671-680 (1983).

[Crossref]
[PubMed]

A. D. Klose and E. W. Larsen, "Light transport in biological tissue based on the simplified spherical harmonics equations," J. Comput. Phys. 220, 441-470 (2006).

[Crossref]

A. D. Klose, V. Ntziachristos, and A.H. Hielscher, "The inverse source problem based on the radiative transfer equation in optical molecular imaging," J. Comput. Phys. 202, 323-345 (2005).

[Crossref]

A. D. Klose, V. Ntziachristos, and A. H. Hielscher, "In vivo fluorescence molecular imaging with a radiative transfer model," Mol. Imaging 3, 230 (2004).

A. H. Hielscher, A. D. Klose, and J. Beuthan, "Evolution strategies for optical tomographic characterization of homogeneous media," Opt. Express 7, 507-518 (2000).

[Crossref]
[PubMed]

W. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. V. Wang, E. A. Hoffman, G. McLennan, P. B. McCray, J. Zabner, and A. Cong, "Practical reconstruction method for bioluminescence tomography," Opt. Express 13, 6756-6771 (2005).

[Crossref]
[PubMed]

J. J. J. Dirckx, L. C. Kuypers, and W. F. Decraemer, "Refractive index of tissue measured," J. Biomed. Opt. 10, 044014 (2005).

[Crossref]

A. D. Klose and E. W. Larsen, "Light transport in biological tissue based on the simplified spherical harmonics equations," J. Comput. Phys. 220, 441-470 (2006).

[Crossref]

E. W. Larsen, "The inverse source problem in radiative transfer," J. Quant. Spectrosc. Radiat. Transf. 15, 1-5 (1975).

[Crossref]

A. J. Chaudhari, F. Darvas, J. R. Bading, R. A. Moats, P. S. Conti, D. J. Smith, S. R. Cherry, and R. M. Leahy, "Hyperspectral and multispectral bioluminescence optical tomography for small animal imaging," Phys. Med. Biol. 50, 5421-5441 (2005).

[Crossref]
[PubMed]

G. Wang, Y. Li, and M. Jiang, "Uniqueness theorems in bioluminescence tomography," Med. Phys. 31, 2289-2299 (2004).

[Crossref]
[PubMed]

W. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. V. Wang, E. A. Hoffman, G. McLennan, P. B. McCray, J. Zabner, and A. Cong, "Practical reconstruction method for bioluminescence tomography," Opt. Express 13, 6756-6771 (2005).

[Crossref]
[PubMed]

W. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. V. Wang, E. A. Hoffman, G. McLennan, P. B. McCray, J. Zabner, and A. Cong, "Practical reconstruction method for bioluminescence tomography," Opt. Express 13, 6756-6771 (2005).

[Crossref]
[PubMed]

W. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. V. Wang, E. A. Hoffman, G. McLennan, P. B. McCray, J. Zabner, and A. Cong, "Practical reconstruction method for bioluminescence tomography," Opt. Express 13, 6756-6771 (2005).

[Crossref]
[PubMed]

N. Metropolis, A. Rosenbluth, M. Rosenbluth, A. Teller, and E. Teller, "Equation of state calculations by fast computing machines," J. Chem. Phys. 21, 1087-1092 (1953).

[Crossref]

A. J. Chaudhari, F. Darvas, J. R. Bading, R. A. Moats, P. S. Conti, D. J. Smith, S. R. Cherry, and R. M. Leahy, "Hyperspectral and multispectral bioluminescence optical tomography for small animal imaging," Phys. Med. Biol. 50, 5421-5441 (2005).

[Crossref]
[PubMed]

S. G. Nash, Linear and Nonlinear Programming (McGraw-Hill, 1996).

B. W. Rice, M. D. Cable, and M. B. Nelson, "In vivo imaging of light-emitting probes," J. Biomed. Opt. 6, 432-440 (2001).

[Crossref]
[PubMed]

J. Nocedal and S. J. Wright, Numerical Optimization (Springer, 1999).

[Crossref]

A. D. Klose, V. Ntziachristos, and A.H. Hielscher, "The inverse source problem based on the radiative transfer equation in optical molecular imaging," J. Comput. Phys. 202, 323-345 (2005).

[Crossref]

A. D. Klose, V. Ntziachristos, and A. H. Hielscher, "In vivo fluorescence molecular imaging with a radiative transfer model," Mol. Imaging 3, 230 (2004).

W. F. Cheong, S. A. Prahl, and A. J. Welch, "A review of the optical properties of biological tissue," IEEE J. Quantum Electron. 26, 2166-2185 (1990).

[Crossref]

G. Alexandrakis, F. R. Rannou, and A. F. Chatziioannou, "Tomographic bioluminescence imaging by use of a combined optical-PET (OPET) system: a computer simulation feasibility study," Phys. Med. Biol. 50, 4225-4241 (2005).

[Crossref]
[PubMed]

T. Troy, D. Jekic-McMullen, L. Sambucetti, and B. Rice, "Quantitative comparison of the sensitivity of detection of fluorescent and bioluminescent reporters in animal models," Mol. Imaging 3, 9-23 (2004).

[Crossref]
[PubMed]

H. Zhao, T. C. Doyle, O. Coquoz, F. Kalish, B. W. Rice, and C. H. Contag, "Emission spectra of bioluminescent reporters and interaction with mammalian tissue determine the sensitivity of detection in vivo," J. Biomed. Opt. 10, 041210-01 (2005).

[Crossref]

B. W. Rice, M. D. Cable, and M. B. Nelson, "In vivo imaging of light-emitting probes," J. Biomed. Opt. 6, 432-440 (2001).

[Crossref]
[PubMed]

N. Metropolis, A. Rosenbluth, M. Rosenbluth, A. Teller, and E. Teller, "Equation of state calculations by fast computing machines," J. Chem. Phys. 21, 1087-1092 (1953).

[Crossref]

N. Metropolis, A. Rosenbluth, M. Rosenbluth, A. Teller, and E. Teller, "Equation of state calculations by fast computing machines," J. Chem. Phys. 21, 1087-1092 (1953).

[Crossref]

T. Troy, D. Jekic-McMullen, L. Sambucetti, and B. Rice, "Quantitative comparison of the sensitivity of detection of fluorescent and bioluminescent reporters in animal models," Mol. Imaging 3, 9-23 (2004).

[Crossref]
[PubMed]

H.-G. Beyer and H.-P. Schwefel, "Evolution strategies," Nat. Comput. 1, 3-52 (2002).

[Crossref]

H.-P. Schwefel, Evolution and Optimum Seeking (Wiley, 1995).

C. E. Siewert, "A radiative-transfer inverse-source problem for a sphere," J. Quant. Spectrosc. Radiat. Transf. 52, 157-160 (1994).

[Crossref]

C. E. Siewert, "An inverse source problem in radiative transfer," J. Quant. Spectrosc. Radiat. Transf. 50, 603-609 (1993).

[Crossref]

A. J. Chaudhari, F. Darvas, J. R. Bading, R. A. Moats, P. S. Conti, D. J. Smith, S. R. Cherry, and R. M. Leahy, "Hyperspectral and multispectral bioluminescence optical tomography for small animal imaging," Phys. Med. Biol. 50, 5421-5441 (2005).

[Crossref]
[PubMed]

G. Bal and A. Tamasan, "Inverse source problem in transport equations" (manuscript in preparation).

N. Metropolis, A. Rosenbluth, M. Rosenbluth, A. Teller, and E. Teller, "Equation of state calculations by fast computing machines," J. Chem. Phys. 21, 1087-1092 (1953).

[Crossref]

N. Metropolis, A. Rosenbluth, M. Rosenbluth, A. Teller, and E. Teller, "Equation of state calculations by fast computing machines," J. Chem. Phys. 21, 1087-1092 (1953).

[Crossref]

T. Troy, D. Jekic-McMullen, L. Sambucetti, and B. Rice, "Quantitative comparison of the sensitivity of detection of fluorescent and bioluminescent reporters in animal models," Mol. Imaging 3, 9-23 (2004).

[Crossref]
[PubMed]

V. V. Tuchin, Handbook of Optical Biomedical Diagnostics (SPIE, 2002).

A. J. Welch and M. J. C. van Gemert, Optical-Thermal Response of Laser-Irradiated Tissue (Plenum, 1995).

S. Kirkpatrick, C. D. Gelatt, Jr., and M. P. Vecchi, "Optimization by simulated annealing," Science 220, 671-680 (1983).

[Crossref]
[PubMed]

W. Han, W. Cong, and G. Wang, "Mathematical theory and numerical analysis of bioluminescence tomography," Inverse Probl. 22, 1659-1675 (2006).

[Crossref]

W. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. V. Wang, E. A. Hoffman, G. McLennan, P. B. McCray, J. Zabner, and A. Cong, "Practical reconstruction method for bioluminescence tomography," Opt. Express 13, 6756-6771 (2005).

[Crossref]
[PubMed]

G. Wang, Y. Li, and M. Jiang, "Uniqueness theorems in bioluminescence tomography," Med. Phys. 31, 2289-2299 (2004).

[Crossref]
[PubMed]

W. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. V. Wang, E. A. Hoffman, G. McLennan, P. B. McCray, J. Zabner, and A. Cong, "Practical reconstruction method for bioluminescence tomography," Opt. Express 13, 6756-6771 (2005).

[Crossref]
[PubMed]

W. F. Cheong, S. A. Prahl, and A. J. Welch, "A review of the optical properties of biological tissue," IEEE J. Quantum Electron. 26, 2166-2185 (1990).

[Crossref]

A. J. Welch and M. J. C. van Gemert, Optical-Thermal Response of Laser-Irradiated Tissue (Plenum, 1995).

D. K. Welsh and S. A. Kay, "Bioluminescence imaging in living organisms," Curr. Opin. Biotechnol. 16, 73-78 (2005).

[Crossref]
[PubMed]

J. Nocedal and S. J. Wright, Numerical Optimization (Springer, 1999).

[Crossref]

W. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. V. Wang, E. A. Hoffman, G. McLennan, P. B. McCray, J. Zabner, and A. Cong, "Practical reconstruction method for bioluminescence tomography," Opt. Express 13, 6756-6771 (2005).

[Crossref]
[PubMed]

H. Zhao, T. C. Doyle, O. Coquoz, F. Kalish, B. W. Rice, and C. H. Contag, "Emission spectra of bioluminescent reporters and interaction with mammalian tissue determine the sensitivity of detection in vivo," J. Biomed. Opt. 10, 041210-01 (2005).

[Crossref]

F. P. Bolin, L. E. Preuss, R. C. Taylor, and R. J. Ference, "Refractive index of some mammalian tissues using a fiber optic cladding method," Appl. Opt. 28, 2297-2303 (1989).

[Crossref]
[PubMed]

A. D. Kim and A. Ishimaru, "Optical diffusion of continuous-wave, pulsed, and density waves in scattering media and comparisons with radiative transfer," Appl. Opt. 37, 5313-5319 (1998).

[Crossref]

B. Chen, K. Stamnes, and J. J. Stamnes, "Validity of the diffusion approximation in bio-optical imaging," Appl. Opt. 40, 6356-6366 (2001).

[Crossref]

H. Li and S. Xie, "Measurement method of the refractive index of biotissue by internal reflection," Appl. Opt. 35, 1793-1795 (1996).

[Crossref]
[PubMed]

D. K. Welsh and S. A. Kay, "Bioluminescence imaging in living organisms," Curr. Opin. Biotechnol. 16, 73-78 (2005).

[Crossref]
[PubMed]

W. F. Cheong, S. A. Prahl, and A. J. Welch, "A review of the optical properties of biological tissue," IEEE J. Quantum Electron. 26, 2166-2185 (1990).

[Crossref]

W. Han, W. Cong, and G. Wang, "Mathematical theory and numerical analysis of bioluminescence tomography," Inverse Probl. 22, 1659-1675 (2006).

[Crossref]

B. W. Rice, M. D. Cable, and M. B. Nelson, "In vivo imaging of light-emitting probes," J. Biomed. Opt. 6, 432-440 (2001).

[Crossref]
[PubMed]

H. Zhao, T. C. Doyle, O. Coquoz, F. Kalish, B. W. Rice, and C. H. Contag, "Emission spectra of bioluminescent reporters and interaction with mammalian tissue determine the sensitivity of detection in vivo," J. Biomed. Opt. 10, 041210-01 (2005).

[Crossref]

J. J. J. Dirckx, L. C. Kuypers, and W. F. Decraemer, "Refractive index of tissue measured," J. Biomed. Opt. 10, 044014 (2005).

[Crossref]

N. Metropolis, A. Rosenbluth, M. Rosenbluth, A. Teller, and E. Teller, "Equation of state calculations by fast computing machines," J. Chem. Phys. 21, 1087-1092 (1953).

[Crossref]

A. D. Klose, V. Ntziachristos, and A.H. Hielscher, "The inverse source problem based on the radiative transfer equation in optical molecular imaging," J. Comput. Phys. 202, 323-345 (2005).

[Crossref]

A. D. Klose and E. W. Larsen, "Light transport in biological tissue based on the simplified spherical harmonics equations," J. Comput. Phys. 220, 441-470 (2006).

[Crossref]

E. W. Larsen, "The inverse source problem in radiative transfer," J. Quant. Spectrosc. Radiat. Transf. 15, 1-5 (1975).

[Crossref]

C. E. Siewert, "An inverse source problem in radiative transfer," J. Quant. Spectrosc. Radiat. Transf. 50, 603-609 (1993).

[Crossref]

C. E. Siewert, "A radiative-transfer inverse-source problem for a sphere," J. Quant. Spectrosc. Radiat. Transf. 52, 157-160 (1994).

[Crossref]

E. D. Aydin, C. R. E. de Oliveira, and A. J. H. Goddard, "A comparison between transport and diffusion calculations using a finite element-spherical harmonics radiation transport method," Med. Phys. 29, 2013-2023 (2002).

[Crossref]
[PubMed]

G. Wang, Y. Li, and M. Jiang, "Uniqueness theorems in bioluminescence tomography," Med. Phys. 31, 2289-2299 (2004).

[Crossref]
[PubMed]

T. Troy, D. Jekic-McMullen, L. Sambucetti, and B. Rice, "Quantitative comparison of the sensitivity of detection of fluorescent and bioluminescent reporters in animal models," Mol. Imaging 3, 9-23 (2004).

[Crossref]
[PubMed]

A. D. Klose, V. Ntziachristos, and A. H. Hielscher, "In vivo fluorescence molecular imaging with a radiative transfer model," Mol. Imaging 3, 230 (2004).

H.-G. Beyer and H.-P. Schwefel, "Evolution strategies," Nat. Comput. 1, 3-52 (2002).

[Crossref]

A. H. Hielscher, A. D. Klose, and J. Beuthan, "Evolution strategies for optical tomographic characterization of homogeneous media," Opt. Express 7, 507-518 (2000).

[Crossref]
[PubMed]

W. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. V. Wang, E. A. Hoffman, G. McLennan, P. B. McCray, J. Zabner, and A. Cong, "Practical reconstruction method for bioluminescence tomography," Opt. Express 13, 6756-6771 (2005).

[Crossref]
[PubMed]

H. Dehghani, S. C. Davis, S. Jiang, B. W. Pogue, and K. D. Paulsen, "Spectrally resolved bioluminescence optical tomography," Opt. Lett. 31, 365-367 (2006).

[Crossref]
[PubMed]

G. J. Tearney, M. E. Brezinski, J. F. Southern, B. E. Bouma, M. R. Hee, and J. G. Fujimotot, "Determination of the refractive-index of highly scattering human tissue by optical coherence tomography," Opt. Lett. 20, 2258-2260 (1995).

[Crossref]
[PubMed]

G. Alexandrakis, F. R. Rannou, and A. F. Chatziioannou, "Tomographic bioluminescence imaging by use of a combined optical-PET (OPET) system: a computer simulation feasibility study," Phys. Med. Biol. 50, 4225-4241 (2005).

[Crossref]
[PubMed]

A. J. Chaudhari, F. Darvas, J. R. Bading, R. A. Moats, P. S. Conti, D. J. Smith, S. R. Cherry, and R. M. Leahy, "Hyperspectral and multispectral bioluminescence optical tomography for small animal imaging," Phys. Med. Biol. 50, 5421-5441 (2005).

[Crossref]
[PubMed]

A. M. Hielscher, R. E. Alcouffe, and R. L. Barbour, "Comparison of finite-difference transport and diffusion calculations for photon migration in homogeneous and heterogeneous tissues," Phys. Med. Biol. 43, 1285-1302 (1998).

[Crossref]
[PubMed]

S. Kirkpatrick, C. D. Gelatt, Jr., and M. P. Vecchi, "Optimization by simulated annealing," Science 220, 671-680 (1983).

[Crossref]
[PubMed]

H.-P. Schwefel, Evolution and Optimum Seeking (Wiley, 1995).

G. Bal and A. Tamasan, "Inverse source problem in transport equations" (manuscript in preparation).

S. G. Nash, Linear and Nonlinear Programming (McGraw-Hill, 1996).

J. Nocedal and S. J. Wright, Numerical Optimization (Springer, 1999).

[Crossref]

V. V. Tuchin, Handbook of Optical Biomedical Diagnostics (SPIE, 2002).

A. J. Welch and M. J. C. van Gemert, Optical-Thermal Response of Laser-Irradiated Tissue (Plenum, 1995).