Abstract

We report on the experimental demonstration of a fast reconstruction method for multiview fluorescence diffuse optical tomography by using a wavelet-based data compression. We experimentally demonstrate that the use of data compression combined with the multiview approach makes it possible to perform a fast reconstruction of high quality. A structured illumination approach, guided by the compression scheme, has been adopted to further reduce the acquisition time. The reconstruction algorithm is based on the finite element method, and hence is suitable for samples of any arbitrary shape.

© 2011 Optical Society of America

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  1. R. Weissleder and V. Ntziachristos, Nat. Med. 9, 123 (2003).
    [CrossRef] [PubMed]
  2. S. R. Arridge and J. C. Schotland, Inverse Probl. 25, 123010 (2009).
    [CrossRef]
  3. D. J. Cuccia, F. Bevilacqua, A. J. Durkin, and B. J. Tromberg, Opt. Lett. 30, 1354 (2005).
    [CrossRef] [PubMed]
  4. S. D. Konecky, A. Mazhar, D. Cuccia, A. J. Durkin, J. C. Schotland, and B. J. Tromberg, Opt. Express 17, 14780 (2009).
    [CrossRef] [PubMed]
  5. C. D’Andrea, N. Ducros, A. Bassi, S. Arridge, and G. Valentini, Biomed. Opt. Express 1, 106 (2010).
    [CrossRef]
  6. A. Joshi, W. Bangerth, and E. M. Sevick-Muraca, Opt. Express 14, 6516 (2006).
    [CrossRef] [PubMed]
  7. J. Ripoll, Opt. Lett. 35, 688 (2010).
    [CrossRef] [PubMed]
  8. V. Venugopal, J. Chen, F. Lesage, and X. Intes, Opt. Lett. 35, 3189 (2010).
    [CrossRef] [PubMed]
  9. N. Ducros, C. D’Andrea, G. Valentini, T. Rudge, S. R. Arridge, and A. Bassi, Opt. Lett. 35, 3676 (2010).
    [CrossRef] [PubMed]
  10. V. A. Markel and J. C. Schotland, Phys. Rev. E 70, 056616 (2004).
    [CrossRef]
  11. T. J. Rudge, V. Y. Soloviev, and S. R. Arridge, Opt. Lett. 35, 763 (2010).
    [CrossRef] [PubMed]
  12. G. Y. Panasyuk, Z. M. Wang, J. C. Schotland, and V. A. Markel, Opt. Lett. 33, 1744 (2008).
    [CrossRef] [PubMed]
  13. N. Deliolanis, T. Lasser, D. Hyde, A. Soubret, J. Ripoll, and V. Ntziachristos, Opt. Lett. 32, 382 (2007).
    [CrossRef] [PubMed]
  14. M. Schweiger and S. R. Arridge, “TOAST Image Reconstruction package,” http://web4.cs.ucl.ac.uk/research/vis/toast/.
  15. J. Dutta, C. Ahn, A. A. Joshi, and R. M. Leahy, Phys. Med. Biol. 55, 2961 (2010).
    [CrossRef] [PubMed]

2010 (6)

2009 (2)

2008 (1)

2007 (1)

2006 (1)

2005 (1)

2004 (1)

V. A. Markel and J. C. Schotland, Phys. Rev. E 70, 056616 (2004).
[CrossRef]

2003 (1)

R. Weissleder and V. Ntziachristos, Nat. Med. 9, 123 (2003).
[CrossRef] [PubMed]

Ahn, C.

J. Dutta, C. Ahn, A. A. Joshi, and R. M. Leahy, Phys. Med. Biol. 55, 2961 (2010).
[CrossRef] [PubMed]

Arridge, S.

Arridge, S. R.

N. Ducros, C. D’Andrea, G. Valentini, T. Rudge, S. R. Arridge, and A. Bassi, Opt. Lett. 35, 3676 (2010).
[CrossRef] [PubMed]

T. J. Rudge, V. Y. Soloviev, and S. R. Arridge, Opt. Lett. 35, 763 (2010).
[CrossRef] [PubMed]

S. R. Arridge and J. C. Schotland, Inverse Probl. 25, 123010 (2009).
[CrossRef]

M. Schweiger and S. R. Arridge, “TOAST Image Reconstruction package,” http://web4.cs.ucl.ac.uk/research/vis/toast/.

Bangerth, W.

Bassi, A.

Bevilacqua, F.

Chen, J.

Cuccia, D.

Cuccia, D. J.

D’Andrea, C.

Deliolanis, N.

Ducros, N.

Durkin, A. J.

Dutta, J.

J. Dutta, C. Ahn, A. A. Joshi, and R. M. Leahy, Phys. Med. Biol. 55, 2961 (2010).
[CrossRef] [PubMed]

Hyde, D.

Intes, X.

Joshi, A.

Joshi, A. A.

J. Dutta, C. Ahn, A. A. Joshi, and R. M. Leahy, Phys. Med. Biol. 55, 2961 (2010).
[CrossRef] [PubMed]

Konecky, S. D.

Lasser, T.

Leahy, R. M.

J. Dutta, C. Ahn, A. A. Joshi, and R. M. Leahy, Phys. Med. Biol. 55, 2961 (2010).
[CrossRef] [PubMed]

Lesage, F.

Markel, V. A.

Mazhar, A.

Ntziachristos, V.

Panasyuk, G. Y.

Ripoll, J.

Rudge, T.

Rudge, T. J.

Schotland, J. C.

Schweiger, M.

M. Schweiger and S. R. Arridge, “TOAST Image Reconstruction package,” http://web4.cs.ucl.ac.uk/research/vis/toast/.

Sevick-Muraca, E. M.

Soloviev, V. Y.

Soubret, A.

Tromberg, B. J.

Valentini, G.

Venugopal, V.

Wang, Z. M.

Weissleder, R.

R. Weissleder and V. Ntziachristos, Nat. Med. 9, 123 (2003).
[CrossRef] [PubMed]

Biomed. Opt. Express (1)

Inverse Probl. (1)

S. R. Arridge and J. C. Schotland, Inverse Probl. 25, 123010 (2009).
[CrossRef]

Nat. Med. (1)

R. Weissleder and V. Ntziachristos, Nat. Med. 9, 123 (2003).
[CrossRef] [PubMed]

Opt. Express (2)

Opt. Lett. (7)

Phys. Med. Biol. (1)

J. Dutta, C. Ahn, A. A. Joshi, and R. M. Leahy, Phys. Med. Biol. 55, 2961 (2010).
[CrossRef] [PubMed]

Phys. Rev. E (1)

V. A. Markel and J. C. Schotland, Phys. Rev. E 70, 056616 (2004).
[CrossRef]

Other (1)

M. Schweiger and S. R. Arridge, “TOAST Image Reconstruction package,” http://web4.cs.ucl.ac.uk/research/vis/toast/.

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Figures (3)

Fig. 1
Fig. 1

(a) Illumination (right) and detection (left) areas, (b) first row, examples of three illumination patterns; second row, Born normalized fluorescence images; third row, compressed images with K = 64 .

Fig. 2
Fig. 2

Reconstruction of the fluorochrome concentration using eight views. Top, sections at different depths at step of 1.5 mm ; bottom, 3D rendering: (a) ground-truth, (b) reconstructions.

Fig. 3
Fig. 3

Reconstructions of the fluorochrome concentration using a single view. Top, sections at different depths at step of 1.5 mm ; bottom, 3D rendering: (a) best view, (b) best view rotated 45 degrees.

Equations (1)

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c * = W T ( W W T + α I ) 1 y ˜ ,

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