Abstract

In deep tissue photoacoustic imaging the spatial resolution is inherently limited by the acoustic wavelength. Recently, it was demonstrated that it is possible to surpass the acoustic diffraction limit by analyzing fluctuations in a set of photoacoustic images obtained under unknown speckle illumination patterns. Here, we purpose an approach to boost reconstruction fidelity and resolution, while reducing the number of acquired images by utilizing a compressed sensing computational reconstruction framework. The approach takes into account prior knowledge of the system response and sparsity of the target structure. We provide proof of principle experiments of the approach and demonstrate that improved performance is obtained when both speckle fluctuations and object priors are used. We numerically study the expected performance as a function of the measurement’s signal to noise ratio and sample spatial-sparsity. The presented reconstruction framework can be applied to analyze existing photoacoustic experimental data sets containing dynamic fluctuations.

© 2017 Optical Society of America

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References

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2017 (1)

2016 (1)

2015 (1)

M. Kim, C. Park, C. Rodriguez, Y. Park, and Y.-H. Cho, “Superresolution imaging with optical fluctuation using speckle patterns illumination,” Sci. Rep. 5, 16525 (2015).
[Crossref] [PubMed]

2014 (1)

A. Liutkus, D. Martina, S. Popoff, G. Chardon, O. Katz, G. Lerosey, S. Gigan, L. Daudet, and I. Carron, “Imaging with nature: compressive imaging using a multiply scattering medium,” Sci. Rep. 4, 5552 (2014).
[Crossref] [PubMed]

2013 (3)

2012 (4)

E. Mudry, K. Belkebir, J. Girard, J. Savatier, E. Le Moal, C. Nicoletti, M. Allain, and A. Sentenac, “Structured illumination microscopy using unknown speckle patterns,” Nat. Photonics 6(5), 312–315 (2012).
[Crossref]

L. V. Wang and S. Hu, “Photoacoustic tomography: in vivo imaging from organelles to organs,” Science 335(6075), 1458–1462 (2012).
[Crossref] [PubMed]

A. Szameit, Y. Shechtman, E. Osherovich, E. Bullkich, P. Sidorenko, H. Dana, S. Steiner, E. B. Kley, S. Gazit, T. Cohen-Hyams, S. Shoham, M. Zibulevsky, I. Yavneh, Y. C. Eldar, O. Cohen, and M. Segev, “Sparsity-based single-shot subwavelength coherent diffractive imaging,” Nat. Mater. 11(5), 455–459 (2012).
[Crossref] [PubMed]

L. Zhu, W. Zhang, D. Elnatan, and B. Huang, “Faster STORM using compressed sensing,” Nat. Methods 9(7), 721–723 (2012).
[Crossref] [PubMed]

2011 (3)

P. Beard, “Biomedical photoacoustic imaging,” Interface Focus 1(4), 602–631 (2011).
[Crossref] [PubMed]

Z. Zhang and B. D. Rao, “Sparse signal recovery with temporally correlated source vectors using sparse Bayesian learning,” IEEE J. Sel. Top. Signal Process. 5(5), 912–926 (2011).
[Crossref]

S. Gleichman and Y. C. Eldar, “Blind Compressed Sensing,” IEEE Trans. Inf. Theory 57(10), 6958–6975 (2011).
[Crossref]

2010 (1)

V. Ntziachristos, “Going deeper than microscopy: the optical imaging frontier in biology,” Nat. Methods 7(8), 603–614 (2010).
[Crossref] [PubMed]

2009 (3)

T. Dertinger, R. Colyer, G. Iyer, S. Weiss, and J. Enderlein, “Fast, background-free, 3D super-resolution optical fluctuation imaging (SOFI),” Proc. Natl. Acad. Sci. U.S.A. 106(52), 22287–22292 (2009).
[Crossref] [PubMed]

O. Katz, Y. Bromberg, and Y. Silberberg, “Compressive ghost imaging,” Appl. Phys. Lett. 95(13), 131110 (2009).
[Crossref]

S. Gazit, A. Szameit, Y. C. Eldar, and M. Segev, “Super-resolution and reconstruction of sparse sub-wavelength images,” Opt. Express 17(26), 23920–23946 (2009).
[Crossref] [PubMed]

2008 (3)

E. J. Candes and M. B. Wakin, “An introduction to compressive sampling,” IEEE Signal Process. Mag. 25(2), 21–30 (2008).
[Crossref]

D. Lim, K. K. Chu, and J. Mertz, “Wide-field fluorescence sectioning with hybrid speckle and uniform-illumination microscopy,” Opt. Lett. 33(16), 1819–1821 (2008).
[Crossref] [PubMed]

M. Mishali and Y. C. Eldar, “Reduce and boost: Recovering arbitrary sets of jointly sparse vectors,” IEEE Trans. Signal Process. 56(10), 4692–4702 (2008).
[Crossref]

2007 (1)

D. P. Wipf and B. D. Rao, “An empirical Bayesian strategy for solving the simultaneous sparse approximation problem,” IEEE Trans. Signal Process. 55(7), 3704–3716 (2007).
[Crossref]

2006 (3)

E. Betzig, G. H. Patterson, R. Sougrat, O. W. Lindwasser, S. Olenych, J. S. Bonifacino, M. W. Davidson, J. Lippincott-Schwartz, and H. F. Hess, “Imaging intracellular fluorescent proteins at nanometer resolution,” Science 313(5793), 1642–1645 (2006).
[Crossref] [PubMed]

M. J. Rust, M. Bates, and X. Zhuang, “Sub-diffraction-limit imaging by stochastic optical reconstruction microscopy (STORM),” Nat. Methods 3(10), 793–795 (2006).
[Crossref] [PubMed]

D. L. Donoho, “Compressed sensing,” IEEE Trans. Inf. Theory 52(4), 1289–1306 (2006).
[Crossref]

2005 (5)

S. F. Cotter, B. D. Rao, K. Engan, and K. Kreutz-Delgado, “Sparse solutions to linear inverse problems with multiple measurement vectors,” IEEE Trans. Signal Process. 53(7), 2477–2488 (2005).
[Crossref]

C. Ventalon and J. Mertz, “Quasi-confocal fluorescence sectioning with dynamic speckle illumination,” Opt. Lett. 30(24), 3350–3352 (2005).
[Crossref] [PubMed]

J. García, Z. Zalevsky, and D. Fixler, “Synthetic aperture superresolution by speckle pattern projection,” Opt. Express 13(16), 6073–6078 (2005).
[Crossref] [PubMed]

M. G. Gustafsson, “Nonlinear structured-illumination microscopy: wide-field fluorescence imaging with theoretically unlimited resolution,” Proc. Natl. Acad. Sci. U.S.A. 102(37), 13081–13086 (2005).
[Crossref] [PubMed]

M. Xu and L. V. Wang, “Universal back-projection algorithm for photoacoustic computed tomography,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 71(1), 016706 (2005).
[Crossref] [PubMed]

1988 (1)

Allain, M.

T. Chaigne, J. Gateau, M. Allain, O. Katz, S. Gigan, A. Sentenac, and E. Bossy, “Super-resolution photoacoustic fluctuation imaging with multiple speckle illumination,” Optica 3(1), 54–57 (2016).
[Crossref]

E. Mudry, K. Belkebir, J. Girard, J. Savatier, E. Le Moal, C. Nicoletti, M. Allain, and A. Sentenac, “Structured illumination microscopy using unknown speckle patterns,” Nat. Photonics 6(5), 312–315 (2012).
[Crossref]

Ayers, G. R.

Bates, M.

M. J. Rust, M. Bates, and X. Zhuang, “Sub-diffraction-limit imaging by stochastic optical reconstruction microscopy (STORM),” Nat. Methods 3(10), 793–795 (2006).
[Crossref] [PubMed]

Beard, P.

P. Beard, “Biomedical photoacoustic imaging,” Interface Focus 1(4), 602–631 (2011).
[Crossref] [PubMed]

Belkebir, K.

E. Mudry, K. Belkebir, J. Girard, J. Savatier, E. Le Moal, C. Nicoletti, M. Allain, and A. Sentenac, “Structured illumination microscopy using unknown speckle patterns,” Nat. Photonics 6(5), 312–315 (2012).
[Crossref]

Berer, T.

Betzig, E.

E. Betzig, G. H. Patterson, R. Sougrat, O. W. Lindwasser, S. Olenych, J. S. Bonifacino, M. W. Davidson, J. Lippincott-Schwartz, and H. F. Hess, “Imaging intracellular fluorescent proteins at nanometer resolution,” Science 313(5793), 1642–1645 (2006).
[Crossref] [PubMed]

Bonifacino, J. S.

E. Betzig, G. H. Patterson, R. Sougrat, O. W. Lindwasser, S. Olenych, J. S. Bonifacino, M. W. Davidson, J. Lippincott-Schwartz, and H. F. Hess, “Imaging intracellular fluorescent proteins at nanometer resolution,” Science 313(5793), 1642–1645 (2006).
[Crossref] [PubMed]

Bossy, E.

Bromberg, Y.

O. Katz, Y. Bromberg, and Y. Silberberg, “Compressive ghost imaging,” Appl. Phys. Lett. 95(13), 131110 (2009).
[Crossref]

Bullkich, E.

A. Szameit, Y. Shechtman, E. Osherovich, E. Bullkich, P. Sidorenko, H. Dana, S. Steiner, E. B. Kley, S. Gazit, T. Cohen-Hyams, S. Shoham, M. Zibulevsky, I. Yavneh, Y. C. Eldar, O. Cohen, and M. Segev, “Sparsity-based single-shot subwavelength coherent diffractive imaging,” Nat. Mater. 11(5), 455–459 (2012).
[Crossref] [PubMed]

Burgholzer, P.

Candes, E. J.

E. J. Candes and M. B. Wakin, “An introduction to compressive sampling,” IEEE Signal Process. Mag. 25(2), 21–30 (2008).
[Crossref]

Carron, I.

A. Liutkus, D. Martina, S. Popoff, G. Chardon, O. Katz, G. Lerosey, S. Gigan, L. Daudet, and I. Carron, “Imaging with nature: compressive imaging using a multiply scattering medium,” Sci. Rep. 4, 5552 (2014).
[Crossref] [PubMed]

Chaigne, T.

Chardon, G.

A. Liutkus, D. Martina, S. Popoff, G. Chardon, O. Katz, G. Lerosey, S. Gigan, L. Daudet, and I. Carron, “Imaging with nature: compressive imaging using a multiply scattering medium,” Sci. Rep. 4, 5552 (2014).
[Crossref] [PubMed]

Cho, Y.-H.

M. Kim, C. Park, C. Rodriguez, Y. Park, and Y.-H. Cho, “Superresolution imaging with optical fluctuation using speckle patterns illumination,” Sci. Rep. 5, 16525 (2015).
[Crossref] [PubMed]

Cho, Y.-W.

Choi, C.

J. Min, J. Jang, D. Keum, S.-W. Ryu, C. Choi, K.-H. Jeong, and J. C. Ye, “Fluorescent microscopy beyond diffraction limits using speckle illumination and joint support recovery,” Sci. Rep. 3, 2075 (2013).
[Crossref] [PubMed]

Chu, K. K.

Cohen, O.

A. Szameit, Y. Shechtman, E. Osherovich, E. Bullkich, P. Sidorenko, H. Dana, S. Steiner, E. B. Kley, S. Gazit, T. Cohen-Hyams, S. Shoham, M. Zibulevsky, I. Yavneh, Y. C. Eldar, O. Cohen, and M. Segev, “Sparsity-based single-shot subwavelength coherent diffractive imaging,” Nat. Mater. 11(5), 455–459 (2012).
[Crossref] [PubMed]

Cohen-Hyams, T.

A. Szameit, Y. Shechtman, E. Osherovich, E. Bullkich, P. Sidorenko, H. Dana, S. Steiner, E. B. Kley, S. Gazit, T. Cohen-Hyams, S. Shoham, M. Zibulevsky, I. Yavneh, Y. C. Eldar, O. Cohen, and M. Segev, “Sparsity-based single-shot subwavelength coherent diffractive imaging,” Nat. Mater. 11(5), 455–459 (2012).
[Crossref] [PubMed]

Colyer, R.

T. Dertinger, R. Colyer, G. Iyer, S. Weiss, and J. Enderlein, “Fast, background-free, 3D super-resolution optical fluctuation imaging (SOFI),” Proc. Natl. Acad. Sci. U.S.A. 106(52), 22287–22292 (2009).
[Crossref] [PubMed]

Cotter, S. F.

S. F. Cotter, B. D. Rao, K. Engan, and K. Kreutz-Delgado, “Sparse solutions to linear inverse problems with multiple measurement vectors,” IEEE Trans. Signal Process. 53(7), 2477–2488 (2005).
[Crossref]

Dainty, J. C.

Dana, H.

A. Szameit, Y. Shechtman, E. Osherovich, E. Bullkich, P. Sidorenko, H. Dana, S. Steiner, E. B. Kley, S. Gazit, T. Cohen-Hyams, S. Shoham, M. Zibulevsky, I. Yavneh, Y. C. Eldar, O. Cohen, and M. Segev, “Sparsity-based single-shot subwavelength coherent diffractive imaging,” Nat. Mater. 11(5), 455–459 (2012).
[Crossref] [PubMed]

Daudet, L.

A. Liutkus, D. Martina, S. Popoff, G. Chardon, O. Katz, G. Lerosey, S. Gigan, L. Daudet, and I. Carron, “Imaging with nature: compressive imaging using a multiply scattering medium,” Sci. Rep. 4, 5552 (2014).
[Crossref] [PubMed]

Davidson, M. W.

E. Betzig, G. H. Patterson, R. Sougrat, O. W. Lindwasser, S. Olenych, J. S. Bonifacino, M. W. Davidson, J. Lippincott-Schwartz, and H. F. Hess, “Imaging intracellular fluorescent proteins at nanometer resolution,” Science 313(5793), 1642–1645 (2006).
[Crossref] [PubMed]

Dertinger, T.

T. Dertinger, R. Colyer, G. Iyer, S. Weiss, and J. Enderlein, “Fast, background-free, 3D super-resolution optical fluctuation imaging (SOFI),” Proc. Natl. Acad. Sci. U.S.A. 106(52), 22287–22292 (2009).
[Crossref] [PubMed]

Donoho, D. L.

D. L. Donoho, “Compressed sensing,” IEEE Trans. Inf. Theory 52(4), 1289–1306 (2006).
[Crossref]

Eldar, Y. C.

A. Szameit, Y. Shechtman, E. Osherovich, E. Bullkich, P. Sidorenko, H. Dana, S. Steiner, E. B. Kley, S. Gazit, T. Cohen-Hyams, S. Shoham, M. Zibulevsky, I. Yavneh, Y. C. Eldar, O. Cohen, and M. Segev, “Sparsity-based single-shot subwavelength coherent diffractive imaging,” Nat. Mater. 11(5), 455–459 (2012).
[Crossref] [PubMed]

S. Gleichman and Y. C. Eldar, “Blind Compressed Sensing,” IEEE Trans. Inf. Theory 57(10), 6958–6975 (2011).
[Crossref]

S. Gazit, A. Szameit, Y. C. Eldar, and M. Segev, “Super-resolution and reconstruction of sparse sub-wavelength images,” Opt. Express 17(26), 23920–23946 (2009).
[Crossref] [PubMed]

M. Mishali and Y. C. Eldar, “Reduce and boost: Recovering arbitrary sets of jointly sparse vectors,” IEEE Trans. Signal Process. 56(10), 4692–4702 (2008).
[Crossref]

Elnatan, D.

L. Zhu, W. Zhang, D. Elnatan, and B. Huang, “Faster STORM using compressed sensing,” Nat. Methods 9(7), 721–723 (2012).
[Crossref] [PubMed]

Enderlein, J.

T. Dertinger, R. Colyer, G. Iyer, S. Weiss, and J. Enderlein, “Fast, background-free, 3D super-resolution optical fluctuation imaging (SOFI),” Proc. Natl. Acad. Sci. U.S.A. 106(52), 22287–22292 (2009).
[Crossref] [PubMed]

Engan, K.

S. F. Cotter, B. D. Rao, K. Engan, and K. Kreutz-Delgado, “Sparse solutions to linear inverse problems with multiple measurement vectors,” IEEE Trans. Signal Process. 53(7), 2477–2488 (2005).
[Crossref]

Fixler, D.

García, J.

Gateau, J.

Gazit, S.

A. Szameit, Y. Shechtman, E. Osherovich, E. Bullkich, P. Sidorenko, H. Dana, S. Steiner, E. B. Kley, S. Gazit, T. Cohen-Hyams, S. Shoham, M. Zibulevsky, I. Yavneh, Y. C. Eldar, O. Cohen, and M. Segev, “Sparsity-based single-shot subwavelength coherent diffractive imaging,” Nat. Mater. 11(5), 455–459 (2012).
[Crossref] [PubMed]

S. Gazit, A. Szameit, Y. C. Eldar, and M. Segev, “Super-resolution and reconstruction of sparse sub-wavelength images,” Opt. Express 17(26), 23920–23946 (2009).
[Crossref] [PubMed]

Gigan, S.

Girard, J.

E. Mudry, K. Belkebir, J. Girard, J. Savatier, E. Le Moal, C. Nicoletti, M. Allain, and A. Sentenac, “Structured illumination microscopy using unknown speckle patterns,” Nat. Photonics 6(5), 312–315 (2012).
[Crossref]

Gleichman, S.

S. Gleichman and Y. C. Eldar, “Blind Compressed Sensing,” IEEE Trans. Inf. Theory 57(10), 6958–6975 (2011).
[Crossref]

Gustafsson, M. G.

M. G. Gustafsson, “Nonlinear structured-illumination microscopy: wide-field fluorescence imaging with theoretically unlimited resolution,” Proc. Natl. Acad. Sci. U.S.A. 102(37), 13081–13086 (2005).
[Crossref] [PubMed]

Haltmeier, M.

Hess, H. F.

E. Betzig, G. H. Patterson, R. Sougrat, O. W. Lindwasser, S. Olenych, J. S. Bonifacino, M. W. Davidson, J. Lippincott-Schwartz, and H. F. Hess, “Imaging intracellular fluorescent proteins at nanometer resolution,” Science 313(5793), 1642–1645 (2006).
[Crossref] [PubMed]

Hu, S.

L. V. Wang and S. Hu, “Photoacoustic tomography: in vivo imaging from organelles to organs,” Science 335(6075), 1458–1462 (2012).
[Crossref] [PubMed]

Huang, B.

L. Zhu, W. Zhang, D. Elnatan, and B. Huang, “Faster STORM using compressed sensing,” Nat. Methods 9(7), 721–723 (2012).
[Crossref] [PubMed]

Iyer, G.

T. Dertinger, R. Colyer, G. Iyer, S. Weiss, and J. Enderlein, “Fast, background-free, 3D super-resolution optical fluctuation imaging (SOFI),” Proc. Natl. Acad. Sci. U.S.A. 106(52), 22287–22292 (2009).
[Crossref] [PubMed]

Jang, J.

J. Min, J. Jang, D. Keum, S.-W. Ryu, C. Choi, K.-H. Jeong, and J. C. Ye, “Fluorescent microscopy beyond diffraction limits using speckle illumination and joint support recovery,” Sci. Rep. 3, 2075 (2013).
[Crossref] [PubMed]

Jeong, K.-H.

J. Min, J. Jang, D. Keum, S.-W. Ryu, C. Choi, K.-H. Jeong, and J. C. Ye, “Fluorescent microscopy beyond diffraction limits using speckle illumination and joint support recovery,” Sci. Rep. 3, 2075 (2013).
[Crossref] [PubMed]

Katz, O.

T. Chaigne, J. Gateau, M. Allain, O. Katz, S. Gigan, A. Sentenac, and E. Bossy, “Super-resolution photoacoustic fluctuation imaging with multiple speckle illumination,” Optica 3(1), 54–57 (2016).
[Crossref]

A. Liutkus, D. Martina, S. Popoff, G. Chardon, O. Katz, G. Lerosey, S. Gigan, L. Daudet, and I. Carron, “Imaging with nature: compressive imaging using a multiply scattering medium,” Sci. Rep. 4, 5552 (2014).
[Crossref] [PubMed]

J. Gateau, T. Chaigne, O. Katz, S. Gigan, and E. Bossy, “Improving visibility in photoacoustic imaging using dynamic speckle illumination,” Opt. Lett. 38(23), 5188–5191 (2013).
[Crossref] [PubMed]

O. Katz, Y. Bromberg, and Y. Silberberg, “Compressive ghost imaging,” Appl. Phys. Lett. 95(13), 131110 (2009).
[Crossref]

Keum, D.

J. Min, J. Jang, D. Keum, S.-W. Ryu, C. Choi, K.-H. Jeong, and J. C. Ye, “Fluorescent microscopy beyond diffraction limits using speckle illumination and joint support recovery,” Sci. Rep. 3, 2075 (2013).
[Crossref] [PubMed]

Kim, M.

M. Kim, C. Park, C. Rodriguez, Y. Park, and Y.-H. Cho, “Superresolution imaging with optical fluctuation using speckle patterns illumination,” Sci. Rep. 5, 16525 (2015).
[Crossref] [PubMed]

Kim, Y.-H.

Kley, E. B.

A. Szameit, Y. Shechtman, E. Osherovich, E. Bullkich, P. Sidorenko, H. Dana, S. Steiner, E. B. Kley, S. Gazit, T. Cohen-Hyams, S. Shoham, M. Zibulevsky, I. Yavneh, Y. C. Eldar, O. Cohen, and M. Segev, “Sparsity-based single-shot subwavelength coherent diffractive imaging,” Nat. Mater. 11(5), 455–459 (2012).
[Crossref] [PubMed]

Kreutz-Delgado, K.

S. F. Cotter, B. D. Rao, K. Engan, and K. Kreutz-Delgado, “Sparse solutions to linear inverse problems with multiple measurement vectors,” IEEE Trans. Signal Process. 53(7), 2477–2488 (2005).
[Crossref]

Le Moal, E.

E. Mudry, K. Belkebir, J. Girard, J. Savatier, E. Le Moal, C. Nicoletti, M. Allain, and A. Sentenac, “Structured illumination microscopy using unknown speckle patterns,” Nat. Photonics 6(5), 312–315 (2012).
[Crossref]

Leiss-Holzinger, E.

Lerosey, G.

A. Liutkus, D. Martina, S. Popoff, G. Chardon, O. Katz, G. Lerosey, S. Gigan, L. Daudet, and I. Carron, “Imaging with nature: compressive imaging using a multiply scattering medium,” Sci. Rep. 4, 5552 (2014).
[Crossref] [PubMed]

Lim, D.

Lindwasser, O. W.

E. Betzig, G. H. Patterson, R. Sougrat, O. W. Lindwasser, S. Olenych, J. S. Bonifacino, M. W. Davidson, J. Lippincott-Schwartz, and H. F. Hess, “Imaging intracellular fluorescent proteins at nanometer resolution,” Science 313(5793), 1642–1645 (2006).
[Crossref] [PubMed]

Lippincott-Schwartz, J.

E. Betzig, G. H. Patterson, R. Sougrat, O. W. Lindwasser, S. Olenych, J. S. Bonifacino, M. W. Davidson, J. Lippincott-Schwartz, and H. F. Hess, “Imaging intracellular fluorescent proteins at nanometer resolution,” Science 313(5793), 1642–1645 (2006).
[Crossref] [PubMed]

Liutkus, A.

A. Liutkus, D. Martina, S. Popoff, G. Chardon, O. Katz, G. Lerosey, S. Gigan, L. Daudet, and I. Carron, “Imaging with nature: compressive imaging using a multiply scattering medium,” Sci. Rep. 4, 5552 (2014).
[Crossref] [PubMed]

Martina, D.

A. Liutkus, D. Martina, S. Popoff, G. Chardon, O. Katz, G. Lerosey, S. Gigan, L. Daudet, and I. Carron, “Imaging with nature: compressive imaging using a multiply scattering medium,” Sci. Rep. 4, 5552 (2014).
[Crossref] [PubMed]

Mertz, J.

Min, J.

J. Min, J. Jang, D. Keum, S.-W. Ryu, C. Choi, K.-H. Jeong, and J. C. Ye, “Fluorescent microscopy beyond diffraction limits using speckle illumination and joint support recovery,” Sci. Rep. 3, 2075 (2013).
[Crossref] [PubMed]

Mishali, M.

M. Mishali and Y. C. Eldar, “Reduce and boost: Recovering arbitrary sets of jointly sparse vectors,” IEEE Trans. Signal Process. 56(10), 4692–4702 (2008).
[Crossref]

Mudry, E.

E. Mudry, K. Belkebir, J. Girard, J. Savatier, E. Le Moal, C. Nicoletti, M. Allain, and A. Sentenac, “Structured illumination microscopy using unknown speckle patterns,” Nat. Photonics 6(5), 312–315 (2012).
[Crossref]

Murray, T. W.

Nicoletti, C.

E. Mudry, K. Belkebir, J. Girard, J. Savatier, E. Le Moal, C. Nicoletti, M. Allain, and A. Sentenac, “Structured illumination microscopy using unknown speckle patterns,” Nat. Photonics 6(5), 312–315 (2012).
[Crossref]

Ntziachristos, V.

V. Ntziachristos, “Going deeper than microscopy: the optical imaging frontier in biology,” Nat. Methods 7(8), 603–614 (2010).
[Crossref] [PubMed]

Oh, J.-E.

Olenych, S.

E. Betzig, G. H. Patterson, R. Sougrat, O. W. Lindwasser, S. Olenych, J. S. Bonifacino, M. W. Davidson, J. Lippincott-Schwartz, and H. F. Hess, “Imaging intracellular fluorescent proteins at nanometer resolution,” Science 313(5793), 1642–1645 (2006).
[Crossref] [PubMed]

Osherovich, E.

A. Szameit, Y. Shechtman, E. Osherovich, E. Bullkich, P. Sidorenko, H. Dana, S. Steiner, E. B. Kley, S. Gazit, T. Cohen-Hyams, S. Shoham, M. Zibulevsky, I. Yavneh, Y. C. Eldar, O. Cohen, and M. Segev, “Sparsity-based single-shot subwavelength coherent diffractive imaging,” Nat. Mater. 11(5), 455–459 (2012).
[Crossref] [PubMed]

Park, C.

M. Kim, C. Park, C. Rodriguez, Y. Park, and Y.-H. Cho, “Superresolution imaging with optical fluctuation using speckle patterns illumination,” Sci. Rep. 5, 16525 (2015).
[Crossref] [PubMed]

Park, Y.

M. Kim, C. Park, C. Rodriguez, Y. Park, and Y.-H. Cho, “Superresolution imaging with optical fluctuation using speckle patterns illumination,” Sci. Rep. 5, 16525 (2015).
[Crossref] [PubMed]

Patterson, G. H.

E. Betzig, G. H. Patterson, R. Sougrat, O. W. Lindwasser, S. Olenych, J. S. Bonifacino, M. W. Davidson, J. Lippincott-Schwartz, and H. F. Hess, “Imaging intracellular fluorescent proteins at nanometer resolution,” Science 313(5793), 1642–1645 (2006).
[Crossref] [PubMed]

Popoff, S.

A. Liutkus, D. Martina, S. Popoff, G. Chardon, O. Katz, G. Lerosey, S. Gigan, L. Daudet, and I. Carron, “Imaging with nature: compressive imaging using a multiply scattering medium,” Sci. Rep. 4, 5552 (2014).
[Crossref] [PubMed]

Rao, B. D.

Z. Zhang and B. D. Rao, “Sparse signal recovery with temporally correlated source vectors using sparse Bayesian learning,” IEEE J. Sel. Top. Signal Process. 5(5), 912–926 (2011).
[Crossref]

D. P. Wipf and B. D. Rao, “An empirical Bayesian strategy for solving the simultaneous sparse approximation problem,” IEEE Trans. Signal Process. 55(7), 3704–3716 (2007).
[Crossref]

S. F. Cotter, B. D. Rao, K. Engan, and K. Kreutz-Delgado, “Sparse solutions to linear inverse problems with multiple measurement vectors,” IEEE Trans. Signal Process. 53(7), 2477–2488 (2005).
[Crossref]

Rodriguez, C.

M. Kim, C. Park, C. Rodriguez, Y. Park, and Y.-H. Cho, “Superresolution imaging with optical fluctuation using speckle patterns illumination,” Sci. Rep. 5, 16525 (2015).
[Crossref] [PubMed]

Rust, M. J.

M. J. Rust, M. Bates, and X. Zhuang, “Sub-diffraction-limit imaging by stochastic optical reconstruction microscopy (STORM),” Nat. Methods 3(10), 793–795 (2006).
[Crossref] [PubMed]

Ryu, S.-W.

J. Min, J. Jang, D. Keum, S.-W. Ryu, C. Choi, K.-H. Jeong, and J. C. Ye, “Fluorescent microscopy beyond diffraction limits using speckle illumination and joint support recovery,” Sci. Rep. 3, 2075 (2013).
[Crossref] [PubMed]

Savatier, J.

E. Mudry, K. Belkebir, J. Girard, J. Savatier, E. Le Moal, C. Nicoletti, M. Allain, and A. Sentenac, “Structured illumination microscopy using unknown speckle patterns,” Nat. Photonics 6(5), 312–315 (2012).
[Crossref]

Scarcelli, G.

Segev, M.

A. Szameit, Y. Shechtman, E. Osherovich, E. Bullkich, P. Sidorenko, H. Dana, S. Steiner, E. B. Kley, S. Gazit, T. Cohen-Hyams, S. Shoham, M. Zibulevsky, I. Yavneh, Y. C. Eldar, O. Cohen, and M. Segev, “Sparsity-based single-shot subwavelength coherent diffractive imaging,” Nat. Mater. 11(5), 455–459 (2012).
[Crossref] [PubMed]

S. Gazit, A. Szameit, Y. C. Eldar, and M. Segev, “Super-resolution and reconstruction of sparse sub-wavelength images,” Opt. Express 17(26), 23920–23946 (2009).
[Crossref] [PubMed]

Sentenac, A.

T. Chaigne, J. Gateau, M. Allain, O. Katz, S. Gigan, A. Sentenac, and E. Bossy, “Super-resolution photoacoustic fluctuation imaging with multiple speckle illumination,” Optica 3(1), 54–57 (2016).
[Crossref]

E. Mudry, K. Belkebir, J. Girard, J. Savatier, E. Le Moal, C. Nicoletti, M. Allain, and A. Sentenac, “Structured illumination microscopy using unknown speckle patterns,” Nat. Photonics 6(5), 312–315 (2012).
[Crossref]

Shechtman, Y.

A. Szameit, Y. Shechtman, E. Osherovich, E. Bullkich, P. Sidorenko, H. Dana, S. Steiner, E. B. Kley, S. Gazit, T. Cohen-Hyams, S. Shoham, M. Zibulevsky, I. Yavneh, Y. C. Eldar, O. Cohen, and M. Segev, “Sparsity-based single-shot subwavelength coherent diffractive imaging,” Nat. Mater. 11(5), 455–459 (2012).
[Crossref] [PubMed]

Shoham, S.

A. Szameit, Y. Shechtman, E. Osherovich, E. Bullkich, P. Sidorenko, H. Dana, S. Steiner, E. B. Kley, S. Gazit, T. Cohen-Hyams, S. Shoham, M. Zibulevsky, I. Yavneh, Y. C. Eldar, O. Cohen, and M. Segev, “Sparsity-based single-shot subwavelength coherent diffractive imaging,” Nat. Mater. 11(5), 455–459 (2012).
[Crossref] [PubMed]

Sidorenko, P.

A. Szameit, Y. Shechtman, E. Osherovich, E. Bullkich, P. Sidorenko, H. Dana, S. Steiner, E. B. Kley, S. Gazit, T. Cohen-Hyams, S. Shoham, M. Zibulevsky, I. Yavneh, Y. C. Eldar, O. Cohen, and M. Segev, “Sparsity-based single-shot subwavelength coherent diffractive imaging,” Nat. Mater. 11(5), 455–459 (2012).
[Crossref] [PubMed]

Silberberg, Y.

O. Katz, Y. Bromberg, and Y. Silberberg, “Compressive ghost imaging,” Appl. Phys. Lett. 95(13), 131110 (2009).
[Crossref]

Sougrat, R.

E. Betzig, G. H. Patterson, R. Sougrat, O. W. Lindwasser, S. Olenych, J. S. Bonifacino, M. W. Davidson, J. Lippincott-Schwartz, and H. F. Hess, “Imaging intracellular fluorescent proteins at nanometer resolution,” Science 313(5793), 1642–1645 (2006).
[Crossref] [PubMed]

Steiner, S.

A. Szameit, Y. Shechtman, E. Osherovich, E. Bullkich, P. Sidorenko, H. Dana, S. Steiner, E. B. Kley, S. Gazit, T. Cohen-Hyams, S. Shoham, M. Zibulevsky, I. Yavneh, Y. C. Eldar, O. Cohen, and M. Segev, “Sparsity-based single-shot subwavelength coherent diffractive imaging,” Nat. Mater. 11(5), 455–459 (2012).
[Crossref] [PubMed]

Szameit, A.

A. Szameit, Y. Shechtman, E. Osherovich, E. Bullkich, P. Sidorenko, H. Dana, S. Steiner, E. B. Kley, S. Gazit, T. Cohen-Hyams, S. Shoham, M. Zibulevsky, I. Yavneh, Y. C. Eldar, O. Cohen, and M. Segev, “Sparsity-based single-shot subwavelength coherent diffractive imaging,” Nat. Mater. 11(5), 455–459 (2012).
[Crossref] [PubMed]

S. Gazit, A. Szameit, Y. C. Eldar, and M. Segev, “Super-resolution and reconstruction of sparse sub-wavelength images,” Opt. Express 17(26), 23920–23946 (2009).
[Crossref] [PubMed]

Ventalon, C.

Wakin, M. B.

E. J. Candes and M. B. Wakin, “An introduction to compressive sampling,” IEEE Signal Process. Mag. 25(2), 21–30 (2008).
[Crossref]

Wang, L. V.

L. V. Wang and S. Hu, “Photoacoustic tomography: in vivo imaging from organelles to organs,” Science 335(6075), 1458–1462 (2012).
[Crossref] [PubMed]

M. Xu and L. V. Wang, “Universal back-projection algorithm for photoacoustic computed tomography,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 71(1), 016706 (2005).
[Crossref] [PubMed]

Weiss, S.

T. Dertinger, R. Colyer, G. Iyer, S. Weiss, and J. Enderlein, “Fast, background-free, 3D super-resolution optical fluctuation imaging (SOFI),” Proc. Natl. Acad. Sci. U.S.A. 106(52), 22287–22292 (2009).
[Crossref] [PubMed]

Wipf, D. P.

D. P. Wipf and B. D. Rao, “An empirical Bayesian strategy for solving the simultaneous sparse approximation problem,” IEEE Trans. Signal Process. 55(7), 3704–3716 (2007).
[Crossref]

Xu, M.

M. Xu and L. V. Wang, “Universal back-projection algorithm for photoacoustic computed tomography,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 71(1), 016706 (2005).
[Crossref] [PubMed]

Yavneh, I.

A. Szameit, Y. Shechtman, E. Osherovich, E. Bullkich, P. Sidorenko, H. Dana, S. Steiner, E. B. Kley, S. Gazit, T. Cohen-Hyams, S. Shoham, M. Zibulevsky, I. Yavneh, Y. C. Eldar, O. Cohen, and M. Segev, “Sparsity-based single-shot subwavelength coherent diffractive imaging,” Nat. Mater. 11(5), 455–459 (2012).
[Crossref] [PubMed]

Ye, J. C.

J. Min, J. Jang, D. Keum, S.-W. Ryu, C. Choi, K.-H. Jeong, and J. C. Ye, “Fluorescent microscopy beyond diffraction limits using speckle illumination and joint support recovery,” Sci. Rep. 3, 2075 (2013).
[Crossref] [PubMed]

Zalevsky, Z.

Zhang, W.

L. Zhu, W. Zhang, D. Elnatan, and B. Huang, “Faster STORM using compressed sensing,” Nat. Methods 9(7), 721–723 (2012).
[Crossref] [PubMed]

Zhang, Z.

Z. Zhang and B. D. Rao, “Sparse signal recovery with temporally correlated source vectors using sparse Bayesian learning,” IEEE J. Sel. Top. Signal Process. 5(5), 912–926 (2011).
[Crossref]

Zhu, L.

L. Zhu, W. Zhang, D. Elnatan, and B. Huang, “Faster STORM using compressed sensing,” Nat. Methods 9(7), 721–723 (2012).
[Crossref] [PubMed]

Zhuang, X.

M. J. Rust, M. Bates, and X. Zhuang, “Sub-diffraction-limit imaging by stochastic optical reconstruction microscopy (STORM),” Nat. Methods 3(10), 793–795 (2006).
[Crossref] [PubMed]

Zibulevsky, M.

A. Szameit, Y. Shechtman, E. Osherovich, E. Bullkich, P. Sidorenko, H. Dana, S. Steiner, E. B. Kley, S. Gazit, T. Cohen-Hyams, S. Shoham, M. Zibulevsky, I. Yavneh, Y. C. Eldar, O. Cohen, and M. Segev, “Sparsity-based single-shot subwavelength coherent diffractive imaging,” Nat. Mater. 11(5), 455–459 (2012).
[Crossref] [PubMed]

Appl. Phys. Lett. (1)

O. Katz, Y. Bromberg, and Y. Silberberg, “Compressive ghost imaging,” Appl. Phys. Lett. 95(13), 131110 (2009).
[Crossref]

IEEE J. Sel. Top. Signal Process. (1)

Z. Zhang and B. D. Rao, “Sparse signal recovery with temporally correlated source vectors using sparse Bayesian learning,” IEEE J. Sel. Top. Signal Process. 5(5), 912–926 (2011).
[Crossref]

IEEE Signal Process. Mag. (1)

E. J. Candes and M. B. Wakin, “An introduction to compressive sampling,” IEEE Signal Process. Mag. 25(2), 21–30 (2008).
[Crossref]

IEEE Trans. Inf. Theory (2)

D. L. Donoho, “Compressed sensing,” IEEE Trans. Inf. Theory 52(4), 1289–1306 (2006).
[Crossref]

S. Gleichman and Y. C. Eldar, “Blind Compressed Sensing,” IEEE Trans. Inf. Theory 57(10), 6958–6975 (2011).
[Crossref]

IEEE Trans. Signal Process. (3)

M. Mishali and Y. C. Eldar, “Reduce and boost: Recovering arbitrary sets of jointly sparse vectors,” IEEE Trans. Signal Process. 56(10), 4692–4702 (2008).
[Crossref]

D. P. Wipf and B. D. Rao, “An empirical Bayesian strategy for solving the simultaneous sparse approximation problem,” IEEE Trans. Signal Process. 55(7), 3704–3716 (2007).
[Crossref]

S. F. Cotter, B. D. Rao, K. Engan, and K. Kreutz-Delgado, “Sparse solutions to linear inverse problems with multiple measurement vectors,” IEEE Trans. Signal Process. 53(7), 2477–2488 (2005).
[Crossref]

Interface Focus (1)

P. Beard, “Biomedical photoacoustic imaging,” Interface Focus 1(4), 602–631 (2011).
[Crossref] [PubMed]

Nat. Mater. (1)

A. Szameit, Y. Shechtman, E. Osherovich, E. Bullkich, P. Sidorenko, H. Dana, S. Steiner, E. B. Kley, S. Gazit, T. Cohen-Hyams, S. Shoham, M. Zibulevsky, I. Yavneh, Y. C. Eldar, O. Cohen, and M. Segev, “Sparsity-based single-shot subwavelength coherent diffractive imaging,” Nat. Mater. 11(5), 455–459 (2012).
[Crossref] [PubMed]

Nat. Methods (3)

V. Ntziachristos, “Going deeper than microscopy: the optical imaging frontier in biology,” Nat. Methods 7(8), 603–614 (2010).
[Crossref] [PubMed]

L. Zhu, W. Zhang, D. Elnatan, and B. Huang, “Faster STORM using compressed sensing,” Nat. Methods 9(7), 721–723 (2012).
[Crossref] [PubMed]

M. J. Rust, M. Bates, and X. Zhuang, “Sub-diffraction-limit imaging by stochastic optical reconstruction microscopy (STORM),” Nat. Methods 3(10), 793–795 (2006).
[Crossref] [PubMed]

Nat. Photonics (1)

E. Mudry, K. Belkebir, J. Girard, J. Savatier, E. Le Moal, C. Nicoletti, M. Allain, and A. Sentenac, “Structured illumination microscopy using unknown speckle patterns,” Nat. Photonics 6(5), 312–315 (2012).
[Crossref]

Opt. Express (2)

Opt. Lett. (5)

Optica (2)

Phys. Rev. E Stat. Nonlin. Soft Matter Phys. (1)

M. Xu and L. V. Wang, “Universal back-projection algorithm for photoacoustic computed tomography,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 71(1), 016706 (2005).
[Crossref] [PubMed]

Proc. Natl. Acad. Sci. U.S.A. (2)

T. Dertinger, R. Colyer, G. Iyer, S. Weiss, and J. Enderlein, “Fast, background-free, 3D super-resolution optical fluctuation imaging (SOFI),” Proc. Natl. Acad. Sci. U.S.A. 106(52), 22287–22292 (2009).
[Crossref] [PubMed]

M. G. Gustafsson, “Nonlinear structured-illumination microscopy: wide-field fluorescence imaging with theoretically unlimited resolution,” Proc. Natl. Acad. Sci. U.S.A. 102(37), 13081–13086 (2005).
[Crossref] [PubMed]

Sci. Rep. (3)

J. Min, J. Jang, D. Keum, S.-W. Ryu, C. Choi, K.-H. Jeong, and J. C. Ye, “Fluorescent microscopy beyond diffraction limits using speckle illumination and joint support recovery,” Sci. Rep. 3, 2075 (2013).
[Crossref] [PubMed]

A. Liutkus, D. Martina, S. Popoff, G. Chardon, O. Katz, G. Lerosey, S. Gigan, L. Daudet, and I. Carron, “Imaging with nature: compressive imaging using a multiply scattering medium,” Sci. Rep. 4, 5552 (2014).
[Crossref] [PubMed]

M. Kim, C. Park, C. Rodriguez, Y. Park, and Y.-H. Cho, “Superresolution imaging with optical fluctuation using speckle patterns illumination,” Sci. Rep. 5, 16525 (2015).
[Crossref] [PubMed]

Science (2)

L. V. Wang and S. Hu, “Photoacoustic tomography: in vivo imaging from organelles to organs,” Science 335(6075), 1458–1462 (2012).
[Crossref] [PubMed]

E. Betzig, G. H. Patterson, R. Sougrat, O. W. Lindwasser, S. Olenych, J. S. Bonifacino, M. W. Davidson, J. Lippincott-Schwartz, and H. F. Hess, “Imaging intracellular fluorescent proteins at nanometer resolution,” Science 313(5793), 1642–1645 (2006).
[Crossref] [PubMed]

Other (3)

Y. C. Eldar, Sampling Theory: Beyond Bandlimited Systems (Cambridge University Press, 2015).

E. Hojman, “Photoacoustic object recovery through M-SBL [Data set],” Zenodo https://doi.org/10.5281/zenodo.268701 (2017).

J. W. Goodman, Speckle Phenomena in Optics: Theory and Applications (Roberts & Co., 2007).

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Figures (3)

Fig. 1
Fig. 1

Concept and numerical example: (a) Experimental setup. A pulsed laser beam is passed through a rotating diffuser producing temporally varying speckle patterns that illuminate the target. For each speckle pattern, ultrasound waves that are generated from the absorbing portions of the sample via the photoacoustic effect are recorded using a linear transducer array. The result is a set of photoacoustic images Y = [y1; y2;…;yL] each with a resolution limited by the acoustic diffraction-limit. (b) An increase in resolution can be obtained by analyzing high-order statistical moments (cumulants) of the temporal fluctuations in the image-set via SOFI [4]. However, calculating higher order moments suffers from statistical noise due to the finite number of acquired images. (c) In the presented approach a compressed-sensing reconstruction algorithm takes advantage of available prior information on the object structure (here, sparsity of the absorbing structure, given by the diagonal matrix D), acoustic system response (given by the convolution matrix H), and optical speckle properties (the matrix U whose columns are the individual speckle illumination patterns) to perform the recovery. The recovery is done over the matrix X = DU. The estimation of the object, D ^ , is then calculated as the row-wise standard deviation over X (see text). The result is a reconstruction with improved fidelity and resolution. The reconstructions in (b-c) are numerical results obtained using 2000 speckle patterns with measurement noise of 5% of signal peak.

Fig. 2
Fig. 2

Experimental comparison of reconstruction strategies: (a,f,k) Direct optical imaging of the absorbing beads without any scatterer. (b,g,i) conventional photoacoustic back-projection calculated by averaging all acquired photoacoustic images, (c,h,m) Reconstruction using 2nd-order SOFI fluctuation analysis followed by Richardson-Lucy deconvolution with the squared PSF, as presented in [4]. (d,i,n) M-SBL algorithm employing sparsity constraint ran using only the conventional photoacoustic image of (b,g,i). (e,j,o) M-SBL using all speckle illuminated images. Scalebars, 250 μm in (a-e), 400 μm in (f-j), 125 μm in (k-o). For M-SBL reconstructions, the variance of the recovered matrix X is shown, for a fair comparison with SOFI 2nd order reconstruction.

Fig. 3
Fig. 3

Numerical study of the M-SBL reconstruction fidelity as a function of SNR, PSF dimensions, and sparsity. (a-b) Correlation between the simulated objects and the reconstruction. Horizontal axis: width of the acoustic PSF (in pixels, pixel size = speckle grain dimensions); vertical axis: sample sparsity, taken here as the number of absorbing pixels contained in the area enclosed by the PSF. Note the gradual transition between success (high correlation) and failure. (c-g) The different PSFs used for the simulations of (a-b), the σ P S F is measured as the full width at 77% of the max, (h-k) Examples of objects used to obtain four of the points in (b), (l-o) M-SBL reconstruction of the corresponding objects and their correlations with the object pattern. Reconstructions shown are the standard deviation of X. (p-s) The conventional photoacoustic images (mean of acquired image set).

Equations (10)

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y m ( x , z ) = h ( x , z )   [ o ( x , z )   u m ( x , z ) ]
y m = H D u m .
Y = H D U
argmin X | | Y H X | | , s . t .    x i j 0 , X   is row sparse .
p ( X . j | Y . j ; γ j ) = N ( μ . j , Σ ) ,
[ μ .1 , , μ . L ] = E { X | Y ; γ } = Γ H T Σ y 1 Y
Σ = Γ ΓH T Σ y 1 H Γ ,
γ ( γ ) = j = 1 L t . j T Σ y t . j + L l o g | Σ y |
γ i + 1 = 1 L μ i . 2 2 1 γ i 1 Σ i i ,     i = 1 , .. , k .
D ^   = [ t = 1 L | μ 1 t ( k ) | 2 t = 1 L | μ 2 t ( k ) | 2 t = 1 L | μ n t ( k ) | 2 ]

Metrics