Abstract

3-D refractive index (RI) distribution is an intrinsic bio-marker for the chemical and structural information about biological cells. Here we develop an optical diffraction tomography technique for the real-time reconstruction of 3-D RI distribution, employing sparse angle illumination and a graphic processing unit (GPU) implementation. The execution time for the tomographic reconstruction is 0.21 s for 963 voxels, which is 17 times faster than that of a conventional approach. We demonstrated the real-time visualization capability with imaging the dynamics of Brownian motion of an anisotropic colloidal dimer and the dynamic shape change in a red blood cell upon shear flow.

© 2013 Optical Society of America

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  1. D. J. Stephens and V. J. Allan, “Light Microscopy Techniques for Live Cell Imaging,” Science 300(5616), 82–86 (2003).
    [Crossref] [PubMed]
  2. J. A. Conchello and J. W. Lichtman, “Optical sectioning microscopy,” Nat. Methods 2(12), 920–931 (2005).
    [Crossref] [PubMed]
  3. S. W. Hell, “Far-field optical nanoscopy,” in Single Molecule Spectroscopy in Chemistry, Physics and Biology(2010), pp. 365–398.
  4. G. Popescu, Quantitative Phase Imaging of Cells and Tissues (McGraw-Hill Professional, 2011).
  5. K. Lee, K. Kim, J. Jung, J. H. Heo, S. Cho, S. Lee, G. Chang, Y. J. Jo, H. Park, and Y. K. Park, “Quantitative phase imaging techniques for the study of cell pathophysiology: from principles to applications,” Sensors (Basel) 13(4), 4170–4191 (2013).
    [Crossref] [PubMed]
  6. A. C. Kak and M. Slaney, Principles of computerized tomographic imaging (Siam, 1988).
  7. V. Lauer, “New approach to optical diffraction tomography yielding a vector equation of diffraction tomography and a novel tomographic microscope,” J. Microsc. 205(2), 165–176 (2002).
    [Crossref] [PubMed]
  8. F. Charrière, A. Marian, F. Montfort, J. Kuehn, T. Colomb, E. Cuche, P. Marquet, and C. Depeursinge, “Cell refractive index tomography by digital holographic microscopy,” Opt. Lett. 31(2), 178–180 (2006).
    [Crossref] [PubMed]
  9. W. Choi, C. Fang-Yen, K. Badizadegan, S. Oh, N. Lue, R. R. Dasari, and M. S. Feld, “Tomographic phase microscopy,” Nat. Methods 4(9), 717–719 (2007).
    [Crossref] [PubMed]
  10. I. Bergoënd, C. Arfire, N. Pavillon, and C. Depeursinge, “Diffraction tomography for biological cells imaging using digital holographic microscopy,” in Laser Applications in Life Sciences 2010(International Society for Optics and Photonics, 2010), pp. 737613–737613–737618.
  11. K. G. Phillips, S. L. Jacques, and O. J. T. McCarty, “Measurement of Single Cell Refractive Index, Dry Mass, Volume, and Density Using a Transillumination Microscope,” Phys. Rev. Lett. 109(11), 118105 (2012).
    [Crossref] [PubMed]
  12. Y. K. Park, M. Diez-Silva, G. Popescu, G. Lykotrafitis, W. S. Choi, M. S. Feld, and S. Suresh, “Refractive index maps and membrane dynamics of human red blood cells parasitized by Plasmodium falciparum,” Proc. Natl. Acad. Sci. U.S.A. 105(37), 13730–13735 (2008).
    [Crossref] [PubMed]
  13. K. Kim, H. Yoon, M. Diez-Silva, M. Dao, R. R. Dasari, and Y. Park, “High-resolution three-dimensional imaging of red blood cells parasitized by Plasmodium falciparum and in situ hemozoin crystals using optical diffraction tomography,” J. Biomed. Opt. 19(1), 011005 (2014).
    [Crossref] [PubMed]
  14. M. Diez-Silva, Y. Park, S. Huang, O. Mercereau-Puijalon, G. Deplaine, C. Lavazec, S. Perrot, S. Bonnefoy, M. Dao, M. S. Feld, J. Han, and S. Suresh, “Pf155/RESA protein influences the dynamic microcirculatory behavior of ring-stage Plasmodium falciparum infected red blood cells,” Sci Rep (2012).
  15. R. Chandramohanadas, Y. Park, L. Lui, A. Li, D. Quinn, K. Liew, M. Diez-Silva, Y. Sung, M. Dao, C. T. Lim, P. R. Preiser, and S. Suresh, “Biophysics of malarial parasite exit from infected erythrocytes,” PLoS ONE 6(6), e20869 (2011).
    [Crossref] [PubMed]
  16. C. Fang-Yen, W. Choi, Y. J. Sung, C. J. Holbrow, R. R. Dasari, and M. S. Feld, “Video-rate tomographic phase microscopy,” J. Biomed. Opt. 16(1), 011005 (2011).
    [Crossref] [PubMed]
  17. Y. Sung, W. Choi, N. Lue, R. R. Dasari, and Z. Yaqoob, “Stain-Free Quantification of Chromosomes in Live Cells Using Regularized Tomographic Phase Microscopy,” PLoS ONE 7(11), e49502 (2012).
    [Crossref] [PubMed]
  18. S. J. LaRoque, E. Y. Sidky, and X. Pan, “Accurate image reconstruction from few-view and limited-angle data in diffraction tomography,” J. Opt. Soc. Am. A 25(7), 1772–1782 (2008).
    [Crossref] [PubMed]
  19. H. Pham, H. F. Ding, N. Sobh, M. Do, S. Patel, and G. Popescu, “Off-axis quantitative phase imaging processing using CUDA: toward real-time applications,” Biomed. Opt. Express 2(7), 1781–1793 (2011).
    [Crossref] [PubMed]
  20. J. Bailleul, B. Simon, M. Debailleul, H. Liu, and O. Haeberlé, “GPU acceleration towards real-time image reconstruction in 3D tomographic diffractive microscopy,” in Proc. of SPIE Vol(2012), pp. 843707–843701.
    [Crossref]
  21. G. Ortega, J. Lobera, M. Arroyo, I. García, and E. M. Garzon, “High Performance Computing for Optical Diffraction Tomography,” in High Performance Computing and Simulation (HPCS),2012International Conference on(IEEE, 2012), pp. 195–201.
    [Crossref]
  22. E. Cuche, P. Marquet, and C. Depeursinge, “Spatial filtering for zero-order and twin-image elimination in digital off-axis holography,” Appl. Opt. 39(23), 4070–4075 (2000).
    [Crossref] [PubMed]
  23. E. Wolf, “Three-dimensional structure determination of semi-transparent objects from holographic data,” Opt. Commun. 1(153), 4 (1969).
    [Crossref]
  24. Y. J. Sung, W. Choi, C. Fang-Yen, K. Badizadegan, R. R. Dasari, and M. S. Feld, “Optical diffraction tomography for high resolution live cell imaging,” Opt. Express 17(1), 266–277 (2009).
    [Crossref] [PubMed]
  25. A. M. Bruckstein, M. Elad, and M. Zibulevsky, “On the Uniqueness of Nonnegative Sparse Solutions to Underdetermined Systems of Equations,” IEEE Trans. Inf. Theory 54(11), 4813–4820 (2008).
    [Crossref]
  26. S. K. Debnath and Y. Park, “Real-time quantitative phase imaging with a spatial phase-shifting algorithm,” Opt. Lett. 36(23), 4677–4679 (2011).
    [Crossref] [PubMed]
  27. B. Bhaduri and G. Popescu, “Derivative method for phase retrieval in off-axis quantitative phase imaging,” Opt. Lett. 37(11), 1868–1870 (2012).
    [Crossref] [PubMed]
  28. O. Zhernovaya, O. Sydoruk, V. Tuchin, and A. Douplik, “The refractive index of human hemoglobin in the visible range,” Phys. Med. Biol. 56(13), 4013–4021 (2011).
    [Crossref] [PubMed]
  29. Y. Han, A. M. Alsayed, M. Nobili, J. Zhang, T. C. Lubensky, and A. G. Yodh, “Brownian motion of an ellipsoid,” Science 314(5799), 626–630 (2006).
    [Crossref] [PubMed]
  30. J. Fung, K. E. Martin, R. W. Perry, D. M. Kaz, R. McGorty, and V. N. Manoharan, “Measuring translational, rotational, and vibrational dynamics in colloids with digital holographic microscopy,” Opt. Express 19(9), 8051–8065 (2011).
    [Crossref] [PubMed]
  31. J. Fung and V. N. Manoharan, “Holographic Measurements of Anisotropic Three-Dimensional Diffusion of Colloidal Clusters,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 88(2), 020302 (2013).
    [Crossref] [PubMed]
  32. H. Yu, H. Park, Y. Kim, M. W. Kim, and Y. Park, “Fourier-transform light scattering of individual colloidal clusters,” Opt. Lett. 37(13), 2577–2579 (2012).
    [Crossref] [PubMed]
  33. K. V. Edmond, M. T. Elsesser, G. L. Hunter, D. J. Pine, and E. R. Weeks, “Decoupling of rotational and translational diffusion in supercooled colloidal fluids,” Proc. Natl. Acad. Sci. U.S.A. 109(44), 17891–17896 (2012).
    [Crossref] [PubMed]
  34. D. Mukhija and M. J. Solomon, “Translational and rotational dynamics of colloidal rods by direct visualization with confocal microscopy,” J. Colloid Interface Sci. 314(1), 98–106 (2007).
    [Crossref] [PubMed]
  35. N. Mohandas, R. M. Hochmuth, and E. E. Spaeth, “Adhesion of red cells to foreign surfaces in the presence of flow,” J. Biomed. Mater. Res. 8(2), 119–136 (1974).
    [Crossref] [PubMed]
  36. B. Kaoui, N. Tahiri, T. Biben, H. Ez-Zahraouy, A. Benyoussef, G. Biros, and C. Misbah, “Complexity of vesicle microcirculation,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 84(4), 041906 (2011).
    [Crossref] [PubMed]
  37. X. J. Li, P. M. Vlahovska, and G. E. Karniadakis, “Continuum- and particle-based modeling of shapes and dynamics of red blood cells in health and disease,” Soft Matter 9(1), 28–37 (2012).
    [Crossref] [PubMed]
  38. T. Wu and J. J. Feng, “Simulation of malaria-infected red blood cells in microfluidic channels: Passage and blockage,” Biomicrofluidics 7, 044115 (2013).
  39. Y. K. Park, C. A. Best, K. Badizadegan, R. R. Dasari, M. S. Feld, T. Kuriabova, M. L. Henle, A. J. Levine, and G. Popescu, “Measurement of red blood cell mechanics during morphological changes,” Proc. Natl. Acad. Sci. U.S.A. 107(15), 6731–6736 (2010).
    [Crossref] [PubMed]
  40. Y. Park, C. A. Best, T. Auth, N. S. Gov, S. A. Safran, G. Popescu, S. Suresh, and M. S. Feld, “Metabolic remodeling of the human red blood cell membrane,” Proc. Natl. Acad. Sci. U.S.A. 107(4), 1289–1294 (2010).
    [Crossref] [PubMed]
  41. Y. Park, C. A. Best, T. Kuriabova, M. L. Henle, M. S. Feld, A. J. Levine, and G. Popescu, “Measurement of the nonlinear elasticity of red blood cell membranes,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 83(5), 051925 (2011).
    [Crossref] [PubMed]
  42. H. S. Byun, T. R. Hillman, J. M. Higgins, M. Diez-Silva, Z. Peng, M. Dao, R. R. Dasari, S. Suresh, and Y. K. Park, “Optical measurement of biomechanical properties of individual erythrocytes from a sickle cell patient,” Acta Biomater. 8(11), 4130–4138 (2012).
    [Crossref] [PubMed]
  43. G. Popescu, Y. Park, W. Choi, R. R. Dasari, M. S. Feld, and K. Badizadegan, “Imaging red blood cell dynamics by quantitative phase microscopy,” Blood Cells Mol. Dis. 41(1), 10–16 (2008).
    [Crossref] [PubMed]
  44. Y. Park, T. Yamauchi, W. Choi, R. Dasari, and M. S. Feld, “Spectroscopic phase microscopy for quantifying hemoglobin concentrations in intact red blood cells,” Opt. Lett. 34(23), 3668–3670 (2009).
    [Crossref] [PubMed]
  45. D. Fu, W. Choi, Y. J. Sung, Z. Yaqoob, R. R. Dasari, and M. Feld, “Quantitative dispersion microscopy,” Biomed. Opt. Express 1(2), 347–353 (2010).
    [Crossref] [PubMed]
  46. M. Rinehart, Y. Z. Zhu, and A. Wax, “Quantitative phase spectroscopy,” Biomed. Opt. Express 3(5), 958–965 (2012).
    [Crossref] [PubMed]
  47. Y. Jang, J. Jang, and Y. Park, “Dynamic spectroscopic phase microscopy for quantifying hemoglobin concentration and dynamic membrane fluctuation in red blood cells,” Opt. Express 20(9), 9673–9681 (2012).
    [Crossref] [PubMed]
  48. J. H. Jung, J. Jang, and Y. Park, “Spectro-refractometry of individual microscopic objects using swept-source quantitative phase imaging,” Anal. Chem. 85(21), 10519–10525 (2013).
    [Crossref] [PubMed]
  49. Z. Wang, L. Millet, M. Mir, H. F. Ding, S. Unarunotai, J. Rogers, M. U. Gillette, and G. Popescu, “Spatial light interference microscopy (SLIM),” Opt. Express 19(2), 1016–1026 (2011).
    [Crossref] [PubMed]
  50. B. Bhaduri, H. Pham, M. Mir, and G. Popescu, “Diffraction phase microscopy with white light,” Opt. Lett. 37(6), 1094–1096 (2012).
    [Crossref] [PubMed]
  51. S. Oh, C. Fang-Yen, W. Choi, Z. Yaqoob, D. Fu, Y. K. Park, R. R. Dassari, and M. S. Feld, “Label-Free Imaging of Membrane Potential Using Membrane Electromotility,” Biophys. J. 103(1), 11–18 (2012).
    [Crossref] [PubMed]
  52. J. Garay, J. A. D’Angelo, Y. K. Park, C. M. Summa, M. L. Aiken, E. Morales, K. Badizadegan, E. Fiebiger, and B. L. Dickinson, “Crosstalk between PKA and Epac regulates the phenotypic maturation and function of human dendritic cells,” J. Immunol. 185(6), 3227–3238 (2010).
    [Crossref] [PubMed]
  53. G. Popescu, Y. Park, N. Lue, C. Best-Popescu, L. Deflores, R. R. Dasari, M. S. Feld, and K. Badizadegan, “Optical imaging of cell mass and growth dynamics,” Am. J. Physiol. Cell Physiol. 295(2), C538–C544 (2008).
    [Crossref] [PubMed]
  54. M. Mir, Z. Wang, Z. Shen, M. Bednarz, R. Bashir, I. Golding, S. G. Prasanth, and G. Popescu, “Optical measurement of cycle-dependent cell growth,” Proc. Natl. Acad. Sci. U.S.A. 108(32), 13124–13129 (2011).
    [Crossref] [PubMed]
  55. S. Cho, S. Kim, Y. Kim, and Y. K. Park, “Optical imaging techniques for the study of malaria,” Trends Biotechnol. 30(2), 71–79 (2012).
    [Crossref] [PubMed]
  56. S. A. Alexandrov, T. R. Hillman, T. Gutzler, and D. D. Sampson, “Synthetic aperture fourier holographic optical microscopy,” Phys. Rev. Lett. 97(16), 168102 (2006).
    [Crossref] [PubMed]
  57. Y.-K. Park, W. Choi, Z. Yaqoob, R. Dasari, K. Badizadegan, and M. S. Feld, “Speckle-field digital holographic microscopy,” Opt. Express 17(15), 12285–12292 (2009).
    [Crossref] [PubMed]
  58. K. Lee, H.-D. Kim, K. Kim, Y. Kim, T. R. Hillman, B. Min, and Y. Park, “Synthetic Fourier transform light scattering,” Opt. Express 21(19), 22453–22463 (2013).
    [Crossref] [PubMed]

2014 (1)

K. Kim, H. Yoon, M. Diez-Silva, M. Dao, R. R. Dasari, and Y. Park, “High-resolution three-dimensional imaging of red blood cells parasitized by Plasmodium falciparum and in situ hemozoin crystals using optical diffraction tomography,” J. Biomed. Opt. 19(1), 011005 (2014).
[Crossref] [PubMed]

2013 (5)

K. Lee, K. Kim, J. Jung, J. H. Heo, S. Cho, S. Lee, G. Chang, Y. J. Jo, H. Park, and Y. K. Park, “Quantitative phase imaging techniques for the study of cell pathophysiology: from principles to applications,” Sensors (Basel) 13(4), 4170–4191 (2013).
[Crossref] [PubMed]

J. Fung and V. N. Manoharan, “Holographic Measurements of Anisotropic Three-Dimensional Diffusion of Colloidal Clusters,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 88(2), 020302 (2013).
[Crossref] [PubMed]

T. Wu and J. J. Feng, “Simulation of malaria-infected red blood cells in microfluidic channels: Passage and blockage,” Biomicrofluidics 7, 044115 (2013).

J. H. Jung, J. Jang, and Y. Park, “Spectro-refractometry of individual microscopic objects using swept-source quantitative phase imaging,” Anal. Chem. 85(21), 10519–10525 (2013).
[Crossref] [PubMed]

K. Lee, H.-D. Kim, K. Kim, Y. Kim, T. R. Hillman, B. Min, and Y. Park, “Synthetic Fourier transform light scattering,” Opt. Express 21(19), 22453–22463 (2013).
[Crossref] [PubMed]

2012 (12)

S. Cho, S. Kim, Y. Kim, and Y. K. Park, “Optical imaging techniques for the study of malaria,” Trends Biotechnol. 30(2), 71–79 (2012).
[Crossref] [PubMed]

M. Rinehart, Y. Z. Zhu, and A. Wax, “Quantitative phase spectroscopy,” Biomed. Opt. Express 3(5), 958–965 (2012).
[Crossref] [PubMed]

Y. Jang, J. Jang, and Y. Park, “Dynamic spectroscopic phase microscopy for quantifying hemoglobin concentration and dynamic membrane fluctuation in red blood cells,” Opt. Express 20(9), 9673–9681 (2012).
[Crossref] [PubMed]

B. Bhaduri, H. Pham, M. Mir, and G. Popescu, “Diffraction phase microscopy with white light,” Opt. Lett. 37(6), 1094–1096 (2012).
[Crossref] [PubMed]

S. Oh, C. Fang-Yen, W. Choi, Z. Yaqoob, D. Fu, Y. K. Park, R. R. Dassari, and M. S. Feld, “Label-Free Imaging of Membrane Potential Using Membrane Electromotility,” Biophys. J. 103(1), 11–18 (2012).
[Crossref] [PubMed]

X. J. Li, P. M. Vlahovska, and G. E. Karniadakis, “Continuum- and particle-based modeling of shapes and dynamics of red blood cells in health and disease,” Soft Matter 9(1), 28–37 (2012).
[Crossref] [PubMed]

H. S. Byun, T. R. Hillman, J. M. Higgins, M. Diez-Silva, Z. Peng, M. Dao, R. R. Dasari, S. Suresh, and Y. K. Park, “Optical measurement of biomechanical properties of individual erythrocytes from a sickle cell patient,” Acta Biomater. 8(11), 4130–4138 (2012).
[Crossref] [PubMed]

H. Yu, H. Park, Y. Kim, M. W. Kim, and Y. Park, “Fourier-transform light scattering of individual colloidal clusters,” Opt. Lett. 37(13), 2577–2579 (2012).
[Crossref] [PubMed]

K. V. Edmond, M. T. Elsesser, G. L. Hunter, D. J. Pine, and E. R. Weeks, “Decoupling of rotational and translational diffusion in supercooled colloidal fluids,” Proc. Natl. Acad. Sci. U.S.A. 109(44), 17891–17896 (2012).
[Crossref] [PubMed]

B. Bhaduri and G. Popescu, “Derivative method for phase retrieval in off-axis quantitative phase imaging,” Opt. Lett. 37(11), 1868–1870 (2012).
[Crossref] [PubMed]

K. G. Phillips, S. L. Jacques, and O. J. T. McCarty, “Measurement of Single Cell Refractive Index, Dry Mass, Volume, and Density Using a Transillumination Microscope,” Phys. Rev. Lett. 109(11), 118105 (2012).
[Crossref] [PubMed]

Y. Sung, W. Choi, N. Lue, R. R. Dasari, and Z. Yaqoob, “Stain-Free Quantification of Chromosomes in Live Cells Using Regularized Tomographic Phase Microscopy,” PLoS ONE 7(11), e49502 (2012).
[Crossref] [PubMed]

2011 (10)

R. Chandramohanadas, Y. Park, L. Lui, A. Li, D. Quinn, K. Liew, M. Diez-Silva, Y. Sung, M. Dao, C. T. Lim, P. R. Preiser, and S. Suresh, “Biophysics of malarial parasite exit from infected erythrocytes,” PLoS ONE 6(6), e20869 (2011).
[Crossref] [PubMed]

C. Fang-Yen, W. Choi, Y. J. Sung, C. J. Holbrow, R. R. Dasari, and M. S. Feld, “Video-rate tomographic phase microscopy,” J. Biomed. Opt. 16(1), 011005 (2011).
[Crossref] [PubMed]

H. Pham, H. F. Ding, N. Sobh, M. Do, S. Patel, and G. Popescu, “Off-axis quantitative phase imaging processing using CUDA: toward real-time applications,” Biomed. Opt. Express 2(7), 1781–1793 (2011).
[Crossref] [PubMed]

O. Zhernovaya, O. Sydoruk, V. Tuchin, and A. Douplik, “The refractive index of human hemoglobin in the visible range,” Phys. Med. Biol. 56(13), 4013–4021 (2011).
[Crossref] [PubMed]

S. K. Debnath and Y. Park, “Real-time quantitative phase imaging with a spatial phase-shifting algorithm,” Opt. Lett. 36(23), 4677–4679 (2011).
[Crossref] [PubMed]

J. Fung, K. E. Martin, R. W. Perry, D. M. Kaz, R. McGorty, and V. N. Manoharan, “Measuring translational, rotational, and vibrational dynamics in colloids with digital holographic microscopy,” Opt. Express 19(9), 8051–8065 (2011).
[Crossref] [PubMed]

Y. Park, C. A. Best, T. Kuriabova, M. L. Henle, M. S. Feld, A. J. Levine, and G. Popescu, “Measurement of the nonlinear elasticity of red blood cell membranes,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 83(5), 051925 (2011).
[Crossref] [PubMed]

B. Kaoui, N. Tahiri, T. Biben, H. Ez-Zahraouy, A. Benyoussef, G. Biros, and C. Misbah, “Complexity of vesicle microcirculation,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 84(4), 041906 (2011).
[Crossref] [PubMed]

Z. Wang, L. Millet, M. Mir, H. F. Ding, S. Unarunotai, J. Rogers, M. U. Gillette, and G. Popescu, “Spatial light interference microscopy (SLIM),” Opt. Express 19(2), 1016–1026 (2011).
[Crossref] [PubMed]

M. Mir, Z. Wang, Z. Shen, M. Bednarz, R. Bashir, I. Golding, S. G. Prasanth, and G. Popescu, “Optical measurement of cycle-dependent cell growth,” Proc. Natl. Acad. Sci. U.S.A. 108(32), 13124–13129 (2011).
[Crossref] [PubMed]

2010 (4)

D. Fu, W. Choi, Y. J. Sung, Z. Yaqoob, R. R. Dasari, and M. Feld, “Quantitative dispersion microscopy,” Biomed. Opt. Express 1(2), 347–353 (2010).
[Crossref] [PubMed]

J. Garay, J. A. D’Angelo, Y. K. Park, C. M. Summa, M. L. Aiken, E. Morales, K. Badizadegan, E. Fiebiger, and B. L. Dickinson, “Crosstalk between PKA and Epac regulates the phenotypic maturation and function of human dendritic cells,” J. Immunol. 185(6), 3227–3238 (2010).
[Crossref] [PubMed]

Y. K. Park, C. A. Best, K. Badizadegan, R. R. Dasari, M. S. Feld, T. Kuriabova, M. L. Henle, A. J. Levine, and G. Popescu, “Measurement of red blood cell mechanics during morphological changes,” Proc. Natl. Acad. Sci. U.S.A. 107(15), 6731–6736 (2010).
[Crossref] [PubMed]

Y. Park, C. A. Best, T. Auth, N. S. Gov, S. A. Safran, G. Popescu, S. Suresh, and M. S. Feld, “Metabolic remodeling of the human red blood cell membrane,” Proc. Natl. Acad. Sci. U.S.A. 107(4), 1289–1294 (2010).
[Crossref] [PubMed]

2009 (3)

2008 (5)

G. Popescu, Y. Park, N. Lue, C. Best-Popescu, L. Deflores, R. R. Dasari, M. S. Feld, and K. Badizadegan, “Optical imaging of cell mass and growth dynamics,” Am. J. Physiol. Cell Physiol. 295(2), C538–C544 (2008).
[Crossref] [PubMed]

A. M. Bruckstein, M. Elad, and M. Zibulevsky, “On the Uniqueness of Nonnegative Sparse Solutions to Underdetermined Systems of Equations,” IEEE Trans. Inf. Theory 54(11), 4813–4820 (2008).
[Crossref]

S. J. LaRoque, E. Y. Sidky, and X. Pan, “Accurate image reconstruction from few-view and limited-angle data in diffraction tomography,” J. Opt. Soc. Am. A 25(7), 1772–1782 (2008).
[Crossref] [PubMed]

Y. K. Park, M. Diez-Silva, G. Popescu, G. Lykotrafitis, W. S. Choi, M. S. Feld, and S. Suresh, “Refractive index maps and membrane dynamics of human red blood cells parasitized by Plasmodium falciparum,” Proc. Natl. Acad. Sci. U.S.A. 105(37), 13730–13735 (2008).
[Crossref] [PubMed]

G. Popescu, Y. Park, W. Choi, R. R. Dasari, M. S. Feld, and K. Badizadegan, “Imaging red blood cell dynamics by quantitative phase microscopy,” Blood Cells Mol. Dis. 41(1), 10–16 (2008).
[Crossref] [PubMed]

2007 (2)

D. Mukhija and M. J. Solomon, “Translational and rotational dynamics of colloidal rods by direct visualization with confocal microscopy,” J. Colloid Interface Sci. 314(1), 98–106 (2007).
[Crossref] [PubMed]

W. Choi, C. Fang-Yen, K. Badizadegan, S. Oh, N. Lue, R. R. Dasari, and M. S. Feld, “Tomographic phase microscopy,” Nat. Methods 4(9), 717–719 (2007).
[Crossref] [PubMed]

2006 (3)

F. Charrière, A. Marian, F. Montfort, J. Kuehn, T. Colomb, E. Cuche, P. Marquet, and C. Depeursinge, “Cell refractive index tomography by digital holographic microscopy,” Opt. Lett. 31(2), 178–180 (2006).
[Crossref] [PubMed]

Y. Han, A. M. Alsayed, M. Nobili, J. Zhang, T. C. Lubensky, and A. G. Yodh, “Brownian motion of an ellipsoid,” Science 314(5799), 626–630 (2006).
[Crossref] [PubMed]

S. A. Alexandrov, T. R. Hillman, T. Gutzler, and D. D. Sampson, “Synthetic aperture fourier holographic optical microscopy,” Phys. Rev. Lett. 97(16), 168102 (2006).
[Crossref] [PubMed]

2005 (1)

J. A. Conchello and J. W. Lichtman, “Optical sectioning microscopy,” Nat. Methods 2(12), 920–931 (2005).
[Crossref] [PubMed]

2003 (1)

D. J. Stephens and V. J. Allan, “Light Microscopy Techniques for Live Cell Imaging,” Science 300(5616), 82–86 (2003).
[Crossref] [PubMed]

2002 (1)

V. Lauer, “New approach to optical diffraction tomography yielding a vector equation of diffraction tomography and a novel tomographic microscope,” J. Microsc. 205(2), 165–176 (2002).
[Crossref] [PubMed]

2000 (1)

1974 (1)

N. Mohandas, R. M. Hochmuth, and E. E. Spaeth, “Adhesion of red cells to foreign surfaces in the presence of flow,” J. Biomed. Mater. Res. 8(2), 119–136 (1974).
[Crossref] [PubMed]

1969 (1)

E. Wolf, “Three-dimensional structure determination of semi-transparent objects from holographic data,” Opt. Commun. 1(153), 4 (1969).
[Crossref]

Aiken, M. L.

J. Garay, J. A. D’Angelo, Y. K. Park, C. M. Summa, M. L. Aiken, E. Morales, K. Badizadegan, E. Fiebiger, and B. L. Dickinson, “Crosstalk between PKA and Epac regulates the phenotypic maturation and function of human dendritic cells,” J. Immunol. 185(6), 3227–3238 (2010).
[Crossref] [PubMed]

Alexandrov, S. A.

S. A. Alexandrov, T. R. Hillman, T. Gutzler, and D. D. Sampson, “Synthetic aperture fourier holographic optical microscopy,” Phys. Rev. Lett. 97(16), 168102 (2006).
[Crossref] [PubMed]

Allan, V. J.

D. J. Stephens and V. J. Allan, “Light Microscopy Techniques for Live Cell Imaging,” Science 300(5616), 82–86 (2003).
[Crossref] [PubMed]

Alsayed, A. M.

Y. Han, A. M. Alsayed, M. Nobili, J. Zhang, T. C. Lubensky, and A. G. Yodh, “Brownian motion of an ellipsoid,” Science 314(5799), 626–630 (2006).
[Crossref] [PubMed]

Auth, T.

Y. Park, C. A. Best, T. Auth, N. S. Gov, S. A. Safran, G. Popescu, S. Suresh, and M. S. Feld, “Metabolic remodeling of the human red blood cell membrane,” Proc. Natl. Acad. Sci. U.S.A. 107(4), 1289–1294 (2010).
[Crossref] [PubMed]

Badizadegan, K.

Y. K. Park, C. A. Best, K. Badizadegan, R. R. Dasari, M. S. Feld, T. Kuriabova, M. L. Henle, A. J. Levine, and G. Popescu, “Measurement of red blood cell mechanics during morphological changes,” Proc. Natl. Acad. Sci. U.S.A. 107(15), 6731–6736 (2010).
[Crossref] [PubMed]

J. Garay, J. A. D’Angelo, Y. K. Park, C. M. Summa, M. L. Aiken, E. Morales, K. Badizadegan, E. Fiebiger, and B. L. Dickinson, “Crosstalk between PKA and Epac regulates the phenotypic maturation and function of human dendritic cells,” J. Immunol. 185(6), 3227–3238 (2010).
[Crossref] [PubMed]

Y. J. Sung, W. Choi, C. Fang-Yen, K. Badizadegan, R. R. Dasari, and M. S. Feld, “Optical diffraction tomography for high resolution live cell imaging,” Opt. Express 17(1), 266–277 (2009).
[Crossref] [PubMed]

Y.-K. Park, W. Choi, Z. Yaqoob, R. Dasari, K. Badizadegan, and M. S. Feld, “Speckle-field digital holographic microscopy,” Opt. Express 17(15), 12285–12292 (2009).
[Crossref] [PubMed]

G. Popescu, Y. Park, N. Lue, C. Best-Popescu, L. Deflores, R. R. Dasari, M. S. Feld, and K. Badizadegan, “Optical imaging of cell mass and growth dynamics,” Am. J. Physiol. Cell Physiol. 295(2), C538–C544 (2008).
[Crossref] [PubMed]

G. Popescu, Y. Park, W. Choi, R. R. Dasari, M. S. Feld, and K. Badizadegan, “Imaging red blood cell dynamics by quantitative phase microscopy,” Blood Cells Mol. Dis. 41(1), 10–16 (2008).
[Crossref] [PubMed]

W. Choi, C. Fang-Yen, K. Badizadegan, S. Oh, N. Lue, R. R. Dasari, and M. S. Feld, “Tomographic phase microscopy,” Nat. Methods 4(9), 717–719 (2007).
[Crossref] [PubMed]

Bailleul, J.

J. Bailleul, B. Simon, M. Debailleul, H. Liu, and O. Haeberlé, “GPU acceleration towards real-time image reconstruction in 3D tomographic diffractive microscopy,” in Proc. of SPIE Vol(2012), pp. 843707–843701.
[Crossref]

Bashir, R.

M. Mir, Z. Wang, Z. Shen, M. Bednarz, R. Bashir, I. Golding, S. G. Prasanth, and G. Popescu, “Optical measurement of cycle-dependent cell growth,” Proc. Natl. Acad. Sci. U.S.A. 108(32), 13124–13129 (2011).
[Crossref] [PubMed]

Bednarz, M.

M. Mir, Z. Wang, Z. Shen, M. Bednarz, R. Bashir, I. Golding, S. G. Prasanth, and G. Popescu, “Optical measurement of cycle-dependent cell growth,” Proc. Natl. Acad. Sci. U.S.A. 108(32), 13124–13129 (2011).
[Crossref] [PubMed]

Benyoussef, A.

B. Kaoui, N. Tahiri, T. Biben, H. Ez-Zahraouy, A. Benyoussef, G. Biros, and C. Misbah, “Complexity of vesicle microcirculation,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 84(4), 041906 (2011).
[Crossref] [PubMed]

Best, C. A.

Y. Park, C. A. Best, T. Kuriabova, M. L. Henle, M. S. Feld, A. J. Levine, and G. Popescu, “Measurement of the nonlinear elasticity of red blood cell membranes,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 83(5), 051925 (2011).
[Crossref] [PubMed]

Y. Park, C. A. Best, T. Auth, N. S. Gov, S. A. Safran, G. Popescu, S. Suresh, and M. S. Feld, “Metabolic remodeling of the human red blood cell membrane,” Proc. Natl. Acad. Sci. U.S.A. 107(4), 1289–1294 (2010).
[Crossref] [PubMed]

Y. K. Park, C. A. Best, K. Badizadegan, R. R. Dasari, M. S. Feld, T. Kuriabova, M. L. Henle, A. J. Levine, and G. Popescu, “Measurement of red blood cell mechanics during morphological changes,” Proc. Natl. Acad. Sci. U.S.A. 107(15), 6731–6736 (2010).
[Crossref] [PubMed]

Best-Popescu, C.

G. Popescu, Y. Park, N. Lue, C. Best-Popescu, L. Deflores, R. R. Dasari, M. S. Feld, and K. Badizadegan, “Optical imaging of cell mass and growth dynamics,” Am. J. Physiol. Cell Physiol. 295(2), C538–C544 (2008).
[Crossref] [PubMed]

Bhaduri, B.

Biben, T.

B. Kaoui, N. Tahiri, T. Biben, H. Ez-Zahraouy, A. Benyoussef, G. Biros, and C. Misbah, “Complexity of vesicle microcirculation,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 84(4), 041906 (2011).
[Crossref] [PubMed]

Biros, G.

B. Kaoui, N. Tahiri, T. Biben, H. Ez-Zahraouy, A. Benyoussef, G. Biros, and C. Misbah, “Complexity of vesicle microcirculation,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 84(4), 041906 (2011).
[Crossref] [PubMed]

Bruckstein, A. M.

A. M. Bruckstein, M. Elad, and M. Zibulevsky, “On the Uniqueness of Nonnegative Sparse Solutions to Underdetermined Systems of Equations,” IEEE Trans. Inf. Theory 54(11), 4813–4820 (2008).
[Crossref]

Byun, H. S.

H. S. Byun, T. R. Hillman, J. M. Higgins, M. Diez-Silva, Z. Peng, M. Dao, R. R. Dasari, S. Suresh, and Y. K. Park, “Optical measurement of biomechanical properties of individual erythrocytes from a sickle cell patient,” Acta Biomater. 8(11), 4130–4138 (2012).
[Crossref] [PubMed]

Chandramohanadas, R.

R. Chandramohanadas, Y. Park, L. Lui, A. Li, D. Quinn, K. Liew, M. Diez-Silva, Y. Sung, M. Dao, C. T. Lim, P. R. Preiser, and S. Suresh, “Biophysics of malarial parasite exit from infected erythrocytes,” PLoS ONE 6(6), e20869 (2011).
[Crossref] [PubMed]

Chang, G.

K. Lee, K. Kim, J. Jung, J. H. Heo, S. Cho, S. Lee, G. Chang, Y. J. Jo, H. Park, and Y. K. Park, “Quantitative phase imaging techniques for the study of cell pathophysiology: from principles to applications,” Sensors (Basel) 13(4), 4170–4191 (2013).
[Crossref] [PubMed]

Charrière, F.

Cho, S.

K. Lee, K. Kim, J. Jung, J. H. Heo, S. Cho, S. Lee, G. Chang, Y. J. Jo, H. Park, and Y. K. Park, “Quantitative phase imaging techniques for the study of cell pathophysiology: from principles to applications,” Sensors (Basel) 13(4), 4170–4191 (2013).
[Crossref] [PubMed]

S. Cho, S. Kim, Y. Kim, and Y. K. Park, “Optical imaging techniques for the study of malaria,” Trends Biotechnol. 30(2), 71–79 (2012).
[Crossref] [PubMed]

Choi, W.

Y. Sung, W. Choi, N. Lue, R. R. Dasari, and Z. Yaqoob, “Stain-Free Quantification of Chromosomes in Live Cells Using Regularized Tomographic Phase Microscopy,” PLoS ONE 7(11), e49502 (2012).
[Crossref] [PubMed]

S. Oh, C. Fang-Yen, W. Choi, Z. Yaqoob, D. Fu, Y. K. Park, R. R. Dassari, and M. S. Feld, “Label-Free Imaging of Membrane Potential Using Membrane Electromotility,” Biophys. J. 103(1), 11–18 (2012).
[Crossref] [PubMed]

C. Fang-Yen, W. Choi, Y. J. Sung, C. J. Holbrow, R. R. Dasari, and M. S. Feld, “Video-rate tomographic phase microscopy,” J. Biomed. Opt. 16(1), 011005 (2011).
[Crossref] [PubMed]

D. Fu, W. Choi, Y. J. Sung, Z. Yaqoob, R. R. Dasari, and M. Feld, “Quantitative dispersion microscopy,” Biomed. Opt. Express 1(2), 347–353 (2010).
[Crossref] [PubMed]

Y. Park, T. Yamauchi, W. Choi, R. Dasari, and M. S. Feld, “Spectroscopic phase microscopy for quantifying hemoglobin concentrations in intact red blood cells,” Opt. Lett. 34(23), 3668–3670 (2009).
[Crossref] [PubMed]

Y.-K. Park, W. Choi, Z. Yaqoob, R. Dasari, K. Badizadegan, and M. S. Feld, “Speckle-field digital holographic microscopy,” Opt. Express 17(15), 12285–12292 (2009).
[Crossref] [PubMed]

Y. J. Sung, W. Choi, C. Fang-Yen, K. Badizadegan, R. R. Dasari, and M. S. Feld, “Optical diffraction tomography for high resolution live cell imaging,” Opt. Express 17(1), 266–277 (2009).
[Crossref] [PubMed]

G. Popescu, Y. Park, W. Choi, R. R. Dasari, M. S. Feld, and K. Badizadegan, “Imaging red blood cell dynamics by quantitative phase microscopy,” Blood Cells Mol. Dis. 41(1), 10–16 (2008).
[Crossref] [PubMed]

W. Choi, C. Fang-Yen, K. Badizadegan, S. Oh, N. Lue, R. R. Dasari, and M. S. Feld, “Tomographic phase microscopy,” Nat. Methods 4(9), 717–719 (2007).
[Crossref] [PubMed]

Choi, W. S.

Y. K. Park, M. Diez-Silva, G. Popescu, G. Lykotrafitis, W. S. Choi, M. S. Feld, and S. Suresh, “Refractive index maps and membrane dynamics of human red blood cells parasitized by Plasmodium falciparum,” Proc. Natl. Acad. Sci. U.S.A. 105(37), 13730–13735 (2008).
[Crossref] [PubMed]

Colomb, T.

Conchello, J. A.

J. A. Conchello and J. W. Lichtman, “Optical sectioning microscopy,” Nat. Methods 2(12), 920–931 (2005).
[Crossref] [PubMed]

Cuche, E.

D’Angelo, J. A.

J. Garay, J. A. D’Angelo, Y. K. Park, C. M. Summa, M. L. Aiken, E. Morales, K. Badizadegan, E. Fiebiger, and B. L. Dickinson, “Crosstalk between PKA and Epac regulates the phenotypic maturation and function of human dendritic cells,” J. Immunol. 185(6), 3227–3238 (2010).
[Crossref] [PubMed]

Dao, M.

K. Kim, H. Yoon, M. Diez-Silva, M. Dao, R. R. Dasari, and Y. Park, “High-resolution three-dimensional imaging of red blood cells parasitized by Plasmodium falciparum and in situ hemozoin crystals using optical diffraction tomography,” J. Biomed. Opt. 19(1), 011005 (2014).
[Crossref] [PubMed]

H. S. Byun, T. R. Hillman, J. M. Higgins, M. Diez-Silva, Z. Peng, M. Dao, R. R. Dasari, S. Suresh, and Y. K. Park, “Optical measurement of biomechanical properties of individual erythrocytes from a sickle cell patient,” Acta Biomater. 8(11), 4130–4138 (2012).
[Crossref] [PubMed]

R. Chandramohanadas, Y. Park, L. Lui, A. Li, D. Quinn, K. Liew, M. Diez-Silva, Y. Sung, M. Dao, C. T. Lim, P. R. Preiser, and S. Suresh, “Biophysics of malarial parasite exit from infected erythrocytes,” PLoS ONE 6(6), e20869 (2011).
[Crossref] [PubMed]

Dasari, R.

Dasari, R. R.

K. Kim, H. Yoon, M. Diez-Silva, M. Dao, R. R. Dasari, and Y. Park, “High-resolution three-dimensional imaging of red blood cells parasitized by Plasmodium falciparum and in situ hemozoin crystals using optical diffraction tomography,” J. Biomed. Opt. 19(1), 011005 (2014).
[Crossref] [PubMed]

Y. Sung, W. Choi, N. Lue, R. R. Dasari, and Z. Yaqoob, “Stain-Free Quantification of Chromosomes in Live Cells Using Regularized Tomographic Phase Microscopy,” PLoS ONE 7(11), e49502 (2012).
[Crossref] [PubMed]

H. S. Byun, T. R. Hillman, J. M. Higgins, M. Diez-Silva, Z. Peng, M. Dao, R. R. Dasari, S. Suresh, and Y. K. Park, “Optical measurement of biomechanical properties of individual erythrocytes from a sickle cell patient,” Acta Biomater. 8(11), 4130–4138 (2012).
[Crossref] [PubMed]

C. Fang-Yen, W. Choi, Y. J. Sung, C. J. Holbrow, R. R. Dasari, and M. S. Feld, “Video-rate tomographic phase microscopy,” J. Biomed. Opt. 16(1), 011005 (2011).
[Crossref] [PubMed]

Y. K. Park, C. A. Best, K. Badizadegan, R. R. Dasari, M. S. Feld, T. Kuriabova, M. L. Henle, A. J. Levine, and G. Popescu, “Measurement of red blood cell mechanics during morphological changes,” Proc. Natl. Acad. Sci. U.S.A. 107(15), 6731–6736 (2010).
[Crossref] [PubMed]

D. Fu, W. Choi, Y. J. Sung, Z. Yaqoob, R. R. Dasari, and M. Feld, “Quantitative dispersion microscopy,” Biomed. Opt. Express 1(2), 347–353 (2010).
[Crossref] [PubMed]

Y. J. Sung, W. Choi, C. Fang-Yen, K. Badizadegan, R. R. Dasari, and M. S. Feld, “Optical diffraction tomography for high resolution live cell imaging,” Opt. Express 17(1), 266–277 (2009).
[Crossref] [PubMed]

G. Popescu, Y. Park, N. Lue, C. Best-Popescu, L. Deflores, R. R. Dasari, M. S. Feld, and K. Badizadegan, “Optical imaging of cell mass and growth dynamics,” Am. J. Physiol. Cell Physiol. 295(2), C538–C544 (2008).
[Crossref] [PubMed]

G. Popescu, Y. Park, W. Choi, R. R. Dasari, M. S. Feld, and K. Badizadegan, “Imaging red blood cell dynamics by quantitative phase microscopy,” Blood Cells Mol. Dis. 41(1), 10–16 (2008).
[Crossref] [PubMed]

W. Choi, C. Fang-Yen, K. Badizadegan, S. Oh, N. Lue, R. R. Dasari, and M. S. Feld, “Tomographic phase microscopy,” Nat. Methods 4(9), 717–719 (2007).
[Crossref] [PubMed]

Dassari, R. R.

S. Oh, C. Fang-Yen, W. Choi, Z. Yaqoob, D. Fu, Y. K. Park, R. R. Dassari, and M. S. Feld, “Label-Free Imaging of Membrane Potential Using Membrane Electromotility,” Biophys. J. 103(1), 11–18 (2012).
[Crossref] [PubMed]

Debailleul, M.

J. Bailleul, B. Simon, M. Debailleul, H. Liu, and O. Haeberlé, “GPU acceleration towards real-time image reconstruction in 3D tomographic diffractive microscopy,” in Proc. of SPIE Vol(2012), pp. 843707–843701.
[Crossref]

Debnath, S. K.

Deflores, L.

G. Popescu, Y. Park, N. Lue, C. Best-Popescu, L. Deflores, R. R. Dasari, M. S. Feld, and K. Badizadegan, “Optical imaging of cell mass and growth dynamics,” Am. J. Physiol. Cell Physiol. 295(2), C538–C544 (2008).
[Crossref] [PubMed]

Depeursinge, C.

Dickinson, B. L.

J. Garay, J. A. D’Angelo, Y. K. Park, C. M. Summa, M. L. Aiken, E. Morales, K. Badizadegan, E. Fiebiger, and B. L. Dickinson, “Crosstalk between PKA and Epac regulates the phenotypic maturation and function of human dendritic cells,” J. Immunol. 185(6), 3227–3238 (2010).
[Crossref] [PubMed]

Diez-Silva, M.

K. Kim, H. Yoon, M. Diez-Silva, M. Dao, R. R. Dasari, and Y. Park, “High-resolution three-dimensional imaging of red blood cells parasitized by Plasmodium falciparum and in situ hemozoin crystals using optical diffraction tomography,” J. Biomed. Opt. 19(1), 011005 (2014).
[Crossref] [PubMed]

H. S. Byun, T. R. Hillman, J. M. Higgins, M. Diez-Silva, Z. Peng, M. Dao, R. R. Dasari, S. Suresh, and Y. K. Park, “Optical measurement of biomechanical properties of individual erythrocytes from a sickle cell patient,” Acta Biomater. 8(11), 4130–4138 (2012).
[Crossref] [PubMed]

R. Chandramohanadas, Y. Park, L. Lui, A. Li, D. Quinn, K. Liew, M. Diez-Silva, Y. Sung, M. Dao, C. T. Lim, P. R. Preiser, and S. Suresh, “Biophysics of malarial parasite exit from infected erythrocytes,” PLoS ONE 6(6), e20869 (2011).
[Crossref] [PubMed]

Y. K. Park, M. Diez-Silva, G. Popescu, G. Lykotrafitis, W. S. Choi, M. S. Feld, and S. Suresh, “Refractive index maps and membrane dynamics of human red blood cells parasitized by Plasmodium falciparum,” Proc. Natl. Acad. Sci. U.S.A. 105(37), 13730–13735 (2008).
[Crossref] [PubMed]

Ding, H. F.

Do, M.

Douplik, A.

O. Zhernovaya, O. Sydoruk, V. Tuchin, and A. Douplik, “The refractive index of human hemoglobin in the visible range,” Phys. Med. Biol. 56(13), 4013–4021 (2011).
[Crossref] [PubMed]

Edmond, K. V.

K. V. Edmond, M. T. Elsesser, G. L. Hunter, D. J. Pine, and E. R. Weeks, “Decoupling of rotational and translational diffusion in supercooled colloidal fluids,” Proc. Natl. Acad. Sci. U.S.A. 109(44), 17891–17896 (2012).
[Crossref] [PubMed]

Elad, M.

A. M. Bruckstein, M. Elad, and M. Zibulevsky, “On the Uniqueness of Nonnegative Sparse Solutions to Underdetermined Systems of Equations,” IEEE Trans. Inf. Theory 54(11), 4813–4820 (2008).
[Crossref]

Elsesser, M. T.

K. V. Edmond, M. T. Elsesser, G. L. Hunter, D. J. Pine, and E. R. Weeks, “Decoupling of rotational and translational diffusion in supercooled colloidal fluids,” Proc. Natl. Acad. Sci. U.S.A. 109(44), 17891–17896 (2012).
[Crossref] [PubMed]

Ez-Zahraouy, H.

B. Kaoui, N. Tahiri, T. Biben, H. Ez-Zahraouy, A. Benyoussef, G. Biros, and C. Misbah, “Complexity of vesicle microcirculation,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 84(4), 041906 (2011).
[Crossref] [PubMed]

Fang-Yen, C.

S. Oh, C. Fang-Yen, W. Choi, Z. Yaqoob, D. Fu, Y. K. Park, R. R. Dassari, and M. S. Feld, “Label-Free Imaging of Membrane Potential Using Membrane Electromotility,” Biophys. J. 103(1), 11–18 (2012).
[Crossref] [PubMed]

C. Fang-Yen, W. Choi, Y. J. Sung, C. J. Holbrow, R. R. Dasari, and M. S. Feld, “Video-rate tomographic phase microscopy,” J. Biomed. Opt. 16(1), 011005 (2011).
[Crossref] [PubMed]

Y. J. Sung, W. Choi, C. Fang-Yen, K. Badizadegan, R. R. Dasari, and M. S. Feld, “Optical diffraction tomography for high resolution live cell imaging,” Opt. Express 17(1), 266–277 (2009).
[Crossref] [PubMed]

W. Choi, C. Fang-Yen, K. Badizadegan, S. Oh, N. Lue, R. R. Dasari, and M. S. Feld, “Tomographic phase microscopy,” Nat. Methods 4(9), 717–719 (2007).
[Crossref] [PubMed]

Feld, M.

Feld, M. S.

S. Oh, C. Fang-Yen, W. Choi, Z. Yaqoob, D. Fu, Y. K. Park, R. R. Dassari, and M. S. Feld, “Label-Free Imaging of Membrane Potential Using Membrane Electromotility,” Biophys. J. 103(1), 11–18 (2012).
[Crossref] [PubMed]

Y. Park, C. A. Best, T. Kuriabova, M. L. Henle, M. S. Feld, A. J. Levine, and G. Popescu, “Measurement of the nonlinear elasticity of red blood cell membranes,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 83(5), 051925 (2011).
[Crossref] [PubMed]

C. Fang-Yen, W. Choi, Y. J. Sung, C. J. Holbrow, R. R. Dasari, and M. S. Feld, “Video-rate tomographic phase microscopy,” J. Biomed. Opt. 16(1), 011005 (2011).
[Crossref] [PubMed]

Y. Park, C. A. Best, T. Auth, N. S. Gov, S. A. Safran, G. Popescu, S. Suresh, and M. S. Feld, “Metabolic remodeling of the human red blood cell membrane,” Proc. Natl. Acad. Sci. U.S.A. 107(4), 1289–1294 (2010).
[Crossref] [PubMed]

Y. K. Park, C. A. Best, K. Badizadegan, R. R. Dasari, M. S. Feld, T. Kuriabova, M. L. Henle, A. J. Levine, and G. Popescu, “Measurement of red blood cell mechanics during morphological changes,” Proc. Natl. Acad. Sci. U.S.A. 107(15), 6731–6736 (2010).
[Crossref] [PubMed]

Y. Park, T. Yamauchi, W. Choi, R. Dasari, and M. S. Feld, “Spectroscopic phase microscopy for quantifying hemoglobin concentrations in intact red blood cells,” Opt. Lett. 34(23), 3668–3670 (2009).
[Crossref] [PubMed]

Y. J. Sung, W. Choi, C. Fang-Yen, K. Badizadegan, R. R. Dasari, and M. S. Feld, “Optical diffraction tomography for high resolution live cell imaging,” Opt. Express 17(1), 266–277 (2009).
[Crossref] [PubMed]

Y.-K. Park, W. Choi, Z. Yaqoob, R. Dasari, K. Badizadegan, and M. S. Feld, “Speckle-field digital holographic microscopy,” Opt. Express 17(15), 12285–12292 (2009).
[Crossref] [PubMed]

G. Popescu, Y. Park, N. Lue, C. Best-Popescu, L. Deflores, R. R. Dasari, M. S. Feld, and K. Badizadegan, “Optical imaging of cell mass and growth dynamics,” Am. J. Physiol. Cell Physiol. 295(2), C538–C544 (2008).
[Crossref] [PubMed]

G. Popescu, Y. Park, W. Choi, R. R. Dasari, M. S. Feld, and K. Badizadegan, “Imaging red blood cell dynamics by quantitative phase microscopy,” Blood Cells Mol. Dis. 41(1), 10–16 (2008).
[Crossref] [PubMed]

Y. K. Park, M. Diez-Silva, G. Popescu, G. Lykotrafitis, W. S. Choi, M. S. Feld, and S. Suresh, “Refractive index maps and membrane dynamics of human red blood cells parasitized by Plasmodium falciparum,” Proc. Natl. Acad. Sci. U.S.A. 105(37), 13730–13735 (2008).
[Crossref] [PubMed]

W. Choi, C. Fang-Yen, K. Badizadegan, S. Oh, N. Lue, R. R. Dasari, and M. S. Feld, “Tomographic phase microscopy,” Nat. Methods 4(9), 717–719 (2007).
[Crossref] [PubMed]

Feng, J. J.

T. Wu and J. J. Feng, “Simulation of malaria-infected red blood cells in microfluidic channels: Passage and blockage,” Biomicrofluidics 7, 044115 (2013).

Fiebiger, E.

J. Garay, J. A. D’Angelo, Y. K. Park, C. M. Summa, M. L. Aiken, E. Morales, K. Badizadegan, E. Fiebiger, and B. L. Dickinson, “Crosstalk between PKA and Epac regulates the phenotypic maturation and function of human dendritic cells,” J. Immunol. 185(6), 3227–3238 (2010).
[Crossref] [PubMed]

Fu, D.

S. Oh, C. Fang-Yen, W. Choi, Z. Yaqoob, D. Fu, Y. K. Park, R. R. Dassari, and M. S. Feld, “Label-Free Imaging of Membrane Potential Using Membrane Electromotility,” Biophys. J. 103(1), 11–18 (2012).
[Crossref] [PubMed]

D. Fu, W. Choi, Y. J. Sung, Z. Yaqoob, R. R. Dasari, and M. Feld, “Quantitative dispersion microscopy,” Biomed. Opt. Express 1(2), 347–353 (2010).
[Crossref] [PubMed]

Fung, J.

J. Fung and V. N. Manoharan, “Holographic Measurements of Anisotropic Three-Dimensional Diffusion of Colloidal Clusters,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 88(2), 020302 (2013).
[Crossref] [PubMed]

J. Fung, K. E. Martin, R. W. Perry, D. M. Kaz, R. McGorty, and V. N. Manoharan, “Measuring translational, rotational, and vibrational dynamics in colloids with digital holographic microscopy,” Opt. Express 19(9), 8051–8065 (2011).
[Crossref] [PubMed]

Garay, J.

J. Garay, J. A. D’Angelo, Y. K. Park, C. M. Summa, M. L. Aiken, E. Morales, K. Badizadegan, E. Fiebiger, and B. L. Dickinson, “Crosstalk between PKA and Epac regulates the phenotypic maturation and function of human dendritic cells,” J. Immunol. 185(6), 3227–3238 (2010).
[Crossref] [PubMed]

Gillette, M. U.

Golding, I.

M. Mir, Z. Wang, Z. Shen, M. Bednarz, R. Bashir, I. Golding, S. G. Prasanth, and G. Popescu, “Optical measurement of cycle-dependent cell growth,” Proc. Natl. Acad. Sci. U.S.A. 108(32), 13124–13129 (2011).
[Crossref] [PubMed]

Gov, N. S.

Y. Park, C. A. Best, T. Auth, N. S. Gov, S. A. Safran, G. Popescu, S. Suresh, and M. S. Feld, “Metabolic remodeling of the human red blood cell membrane,” Proc. Natl. Acad. Sci. U.S.A. 107(4), 1289–1294 (2010).
[Crossref] [PubMed]

Gutzler, T.

S. A. Alexandrov, T. R. Hillman, T. Gutzler, and D. D. Sampson, “Synthetic aperture fourier holographic optical microscopy,” Phys. Rev. Lett. 97(16), 168102 (2006).
[Crossref] [PubMed]

Haeberlé, O.

J. Bailleul, B. Simon, M. Debailleul, H. Liu, and O. Haeberlé, “GPU acceleration towards real-time image reconstruction in 3D tomographic diffractive microscopy,” in Proc. of SPIE Vol(2012), pp. 843707–843701.
[Crossref]

Han, Y.

Y. Han, A. M. Alsayed, M. Nobili, J. Zhang, T. C. Lubensky, and A. G. Yodh, “Brownian motion of an ellipsoid,” Science 314(5799), 626–630 (2006).
[Crossref] [PubMed]

Henle, M. L.

Y. Park, C. A. Best, T. Kuriabova, M. L. Henle, M. S. Feld, A. J. Levine, and G. Popescu, “Measurement of the nonlinear elasticity of red blood cell membranes,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 83(5), 051925 (2011).
[Crossref] [PubMed]

Y. K. Park, C. A. Best, K. Badizadegan, R. R. Dasari, M. S. Feld, T. Kuriabova, M. L. Henle, A. J. Levine, and G. Popescu, “Measurement of red blood cell mechanics during morphological changes,” Proc. Natl. Acad. Sci. U.S.A. 107(15), 6731–6736 (2010).
[Crossref] [PubMed]

Heo, J. H.

K. Lee, K. Kim, J. Jung, J. H. Heo, S. Cho, S. Lee, G. Chang, Y. J. Jo, H. Park, and Y. K. Park, “Quantitative phase imaging techniques for the study of cell pathophysiology: from principles to applications,” Sensors (Basel) 13(4), 4170–4191 (2013).
[Crossref] [PubMed]

Higgins, J. M.

H. S. Byun, T. R. Hillman, J. M. Higgins, M. Diez-Silva, Z. Peng, M. Dao, R. R. Dasari, S. Suresh, and Y. K. Park, “Optical measurement of biomechanical properties of individual erythrocytes from a sickle cell patient,” Acta Biomater. 8(11), 4130–4138 (2012).
[Crossref] [PubMed]

Hillman, T. R.

K. Lee, H.-D. Kim, K. Kim, Y. Kim, T. R. Hillman, B. Min, and Y. Park, “Synthetic Fourier transform light scattering,” Opt. Express 21(19), 22453–22463 (2013).
[Crossref] [PubMed]

H. S. Byun, T. R. Hillman, J. M. Higgins, M. Diez-Silva, Z. Peng, M. Dao, R. R. Dasari, S. Suresh, and Y. K. Park, “Optical measurement of biomechanical properties of individual erythrocytes from a sickle cell patient,” Acta Biomater. 8(11), 4130–4138 (2012).
[Crossref] [PubMed]

S. A. Alexandrov, T. R. Hillman, T. Gutzler, and D. D. Sampson, “Synthetic aperture fourier holographic optical microscopy,” Phys. Rev. Lett. 97(16), 168102 (2006).
[Crossref] [PubMed]

Hochmuth, R. M.

N. Mohandas, R. M. Hochmuth, and E. E. Spaeth, “Adhesion of red cells to foreign surfaces in the presence of flow,” J. Biomed. Mater. Res. 8(2), 119–136 (1974).
[Crossref] [PubMed]

Holbrow, C. J.

C. Fang-Yen, W. Choi, Y. J. Sung, C. J. Holbrow, R. R. Dasari, and M. S. Feld, “Video-rate tomographic phase microscopy,” J. Biomed. Opt. 16(1), 011005 (2011).
[Crossref] [PubMed]

Hunter, G. L.

K. V. Edmond, M. T. Elsesser, G. L. Hunter, D. J. Pine, and E. R. Weeks, “Decoupling of rotational and translational diffusion in supercooled colloidal fluids,” Proc. Natl. Acad. Sci. U.S.A. 109(44), 17891–17896 (2012).
[Crossref] [PubMed]

Jacques, S. L.

K. G. Phillips, S. L. Jacques, and O. J. T. McCarty, “Measurement of Single Cell Refractive Index, Dry Mass, Volume, and Density Using a Transillumination Microscope,” Phys. Rev. Lett. 109(11), 118105 (2012).
[Crossref] [PubMed]

Jang, J.

J. H. Jung, J. Jang, and Y. Park, “Spectro-refractometry of individual microscopic objects using swept-source quantitative phase imaging,” Anal. Chem. 85(21), 10519–10525 (2013).
[Crossref] [PubMed]

Y. Jang, J. Jang, and Y. Park, “Dynamic spectroscopic phase microscopy for quantifying hemoglobin concentration and dynamic membrane fluctuation in red blood cells,” Opt. Express 20(9), 9673–9681 (2012).
[Crossref] [PubMed]

Jang, Y.

Jo, Y. J.

K. Lee, K. Kim, J. Jung, J. H. Heo, S. Cho, S. Lee, G. Chang, Y. J. Jo, H. Park, and Y. K. Park, “Quantitative phase imaging techniques for the study of cell pathophysiology: from principles to applications,” Sensors (Basel) 13(4), 4170–4191 (2013).
[Crossref] [PubMed]

Jung, J.

K. Lee, K. Kim, J. Jung, J. H. Heo, S. Cho, S. Lee, G. Chang, Y. J. Jo, H. Park, and Y. K. Park, “Quantitative phase imaging techniques for the study of cell pathophysiology: from principles to applications,” Sensors (Basel) 13(4), 4170–4191 (2013).
[Crossref] [PubMed]

Jung, J. H.

J. H. Jung, J. Jang, and Y. Park, “Spectro-refractometry of individual microscopic objects using swept-source quantitative phase imaging,” Anal. Chem. 85(21), 10519–10525 (2013).
[Crossref] [PubMed]

Kaoui, B.

B. Kaoui, N. Tahiri, T. Biben, H. Ez-Zahraouy, A. Benyoussef, G. Biros, and C. Misbah, “Complexity of vesicle microcirculation,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 84(4), 041906 (2011).
[Crossref] [PubMed]

Karniadakis, G. E.

X. J. Li, P. M. Vlahovska, and G. E. Karniadakis, “Continuum- and particle-based modeling of shapes and dynamics of red blood cells in health and disease,” Soft Matter 9(1), 28–37 (2012).
[Crossref] [PubMed]

Kaz, D. M.

Kim, H.-D.

Kim, K.

K. Kim, H. Yoon, M. Diez-Silva, M. Dao, R. R. Dasari, and Y. Park, “High-resolution three-dimensional imaging of red blood cells parasitized by Plasmodium falciparum and in situ hemozoin crystals using optical diffraction tomography,” J. Biomed. Opt. 19(1), 011005 (2014).
[Crossref] [PubMed]

K. Lee, K. Kim, J. Jung, J. H. Heo, S. Cho, S. Lee, G. Chang, Y. J. Jo, H. Park, and Y. K. Park, “Quantitative phase imaging techniques for the study of cell pathophysiology: from principles to applications,” Sensors (Basel) 13(4), 4170–4191 (2013).
[Crossref] [PubMed]

K. Lee, H.-D. Kim, K. Kim, Y. Kim, T. R. Hillman, B. Min, and Y. Park, “Synthetic Fourier transform light scattering,” Opt. Express 21(19), 22453–22463 (2013).
[Crossref] [PubMed]

Kim, M. W.

Kim, S.

S. Cho, S. Kim, Y. Kim, and Y. K. Park, “Optical imaging techniques for the study of malaria,” Trends Biotechnol. 30(2), 71–79 (2012).
[Crossref] [PubMed]

Kim, Y.

Kuehn, J.

Kuriabova, T.

Y. Park, C. A. Best, T. Kuriabova, M. L. Henle, M. S. Feld, A. J. Levine, and G. Popescu, “Measurement of the nonlinear elasticity of red blood cell membranes,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 83(5), 051925 (2011).
[Crossref] [PubMed]

Y. K. Park, C. A. Best, K. Badizadegan, R. R. Dasari, M. S. Feld, T. Kuriabova, M. L. Henle, A. J. Levine, and G. Popescu, “Measurement of red blood cell mechanics during morphological changes,” Proc. Natl. Acad. Sci. U.S.A. 107(15), 6731–6736 (2010).
[Crossref] [PubMed]

LaRoque, S. J.

Lauer, V.

V. Lauer, “New approach to optical diffraction tomography yielding a vector equation of diffraction tomography and a novel tomographic microscope,” J. Microsc. 205(2), 165–176 (2002).
[Crossref] [PubMed]

Lee, K.

K. Lee, K. Kim, J. Jung, J. H. Heo, S. Cho, S. Lee, G. Chang, Y. J. Jo, H. Park, and Y. K. Park, “Quantitative phase imaging techniques for the study of cell pathophysiology: from principles to applications,” Sensors (Basel) 13(4), 4170–4191 (2013).
[Crossref] [PubMed]

K. Lee, H.-D. Kim, K. Kim, Y. Kim, T. R. Hillman, B. Min, and Y. Park, “Synthetic Fourier transform light scattering,” Opt. Express 21(19), 22453–22463 (2013).
[Crossref] [PubMed]

Lee, S.

K. Lee, K. Kim, J. Jung, J. H. Heo, S. Cho, S. Lee, G. Chang, Y. J. Jo, H. Park, and Y. K. Park, “Quantitative phase imaging techniques for the study of cell pathophysiology: from principles to applications,” Sensors (Basel) 13(4), 4170–4191 (2013).
[Crossref] [PubMed]

Levine, A. J.

Y. Park, C. A. Best, T. Kuriabova, M. L. Henle, M. S. Feld, A. J. Levine, and G. Popescu, “Measurement of the nonlinear elasticity of red blood cell membranes,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 83(5), 051925 (2011).
[Crossref] [PubMed]

Y. K. Park, C. A. Best, K. Badizadegan, R. R. Dasari, M. S. Feld, T. Kuriabova, M. L. Henle, A. J. Levine, and G. Popescu, “Measurement of red blood cell mechanics during morphological changes,” Proc. Natl. Acad. Sci. U.S.A. 107(15), 6731–6736 (2010).
[Crossref] [PubMed]

Li, A.

R. Chandramohanadas, Y. Park, L. Lui, A. Li, D. Quinn, K. Liew, M. Diez-Silva, Y. Sung, M. Dao, C. T. Lim, P. R. Preiser, and S. Suresh, “Biophysics of malarial parasite exit from infected erythrocytes,” PLoS ONE 6(6), e20869 (2011).
[Crossref] [PubMed]

Li, X. J.

X. J. Li, P. M. Vlahovska, and G. E. Karniadakis, “Continuum- and particle-based modeling of shapes and dynamics of red blood cells in health and disease,” Soft Matter 9(1), 28–37 (2012).
[Crossref] [PubMed]

Lichtman, J. W.

J. A. Conchello and J. W. Lichtman, “Optical sectioning microscopy,” Nat. Methods 2(12), 920–931 (2005).
[Crossref] [PubMed]

Liew, K.

R. Chandramohanadas, Y. Park, L. Lui, A. Li, D. Quinn, K. Liew, M. Diez-Silva, Y. Sung, M. Dao, C. T. Lim, P. R. Preiser, and S. Suresh, “Biophysics of malarial parasite exit from infected erythrocytes,” PLoS ONE 6(6), e20869 (2011).
[Crossref] [PubMed]

Lim, C. T.

R. Chandramohanadas, Y. Park, L. Lui, A. Li, D. Quinn, K. Liew, M. Diez-Silva, Y. Sung, M. Dao, C. T. Lim, P. R. Preiser, and S. Suresh, “Biophysics of malarial parasite exit from infected erythrocytes,” PLoS ONE 6(6), e20869 (2011).
[Crossref] [PubMed]

Liu, H.

J. Bailleul, B. Simon, M. Debailleul, H. Liu, and O. Haeberlé, “GPU acceleration towards real-time image reconstruction in 3D tomographic diffractive microscopy,” in Proc. of SPIE Vol(2012), pp. 843707–843701.
[Crossref]

Lubensky, T. C.

Y. Han, A. M. Alsayed, M. Nobili, J. Zhang, T. C. Lubensky, and A. G. Yodh, “Brownian motion of an ellipsoid,” Science 314(5799), 626–630 (2006).
[Crossref] [PubMed]

Lue, N.

Y. Sung, W. Choi, N. Lue, R. R. Dasari, and Z. Yaqoob, “Stain-Free Quantification of Chromosomes in Live Cells Using Regularized Tomographic Phase Microscopy,” PLoS ONE 7(11), e49502 (2012).
[Crossref] [PubMed]

G. Popescu, Y. Park, N. Lue, C. Best-Popescu, L. Deflores, R. R. Dasari, M. S. Feld, and K. Badizadegan, “Optical imaging of cell mass and growth dynamics,” Am. J. Physiol. Cell Physiol. 295(2), C538–C544 (2008).
[Crossref] [PubMed]

W. Choi, C. Fang-Yen, K. Badizadegan, S. Oh, N. Lue, R. R. Dasari, and M. S. Feld, “Tomographic phase microscopy,” Nat. Methods 4(9), 717–719 (2007).
[Crossref] [PubMed]

Lui, L.

R. Chandramohanadas, Y. Park, L. Lui, A. Li, D. Quinn, K. Liew, M. Diez-Silva, Y. Sung, M. Dao, C. T. Lim, P. R. Preiser, and S. Suresh, “Biophysics of malarial parasite exit from infected erythrocytes,” PLoS ONE 6(6), e20869 (2011).
[Crossref] [PubMed]

Lykotrafitis, G.

Y. K. Park, M. Diez-Silva, G. Popescu, G. Lykotrafitis, W. S. Choi, M. S. Feld, and S. Suresh, “Refractive index maps and membrane dynamics of human red blood cells parasitized by Plasmodium falciparum,” Proc. Natl. Acad. Sci. U.S.A. 105(37), 13730–13735 (2008).
[Crossref] [PubMed]

Manoharan, V. N.

J. Fung and V. N. Manoharan, “Holographic Measurements of Anisotropic Three-Dimensional Diffusion of Colloidal Clusters,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 88(2), 020302 (2013).
[Crossref] [PubMed]

J. Fung, K. E. Martin, R. W. Perry, D. M. Kaz, R. McGorty, and V. N. Manoharan, “Measuring translational, rotational, and vibrational dynamics in colloids with digital holographic microscopy,” Opt. Express 19(9), 8051–8065 (2011).
[Crossref] [PubMed]

Marian, A.

Marquet, P.

Martin, K. E.

McCarty, O. J. T.

K. G. Phillips, S. L. Jacques, and O. J. T. McCarty, “Measurement of Single Cell Refractive Index, Dry Mass, Volume, and Density Using a Transillumination Microscope,” Phys. Rev. Lett. 109(11), 118105 (2012).
[Crossref] [PubMed]

McGorty, R.

Millet, L.

Min, B.

Mir, M.

Misbah, C.

B. Kaoui, N. Tahiri, T. Biben, H. Ez-Zahraouy, A. Benyoussef, G. Biros, and C. Misbah, “Complexity of vesicle microcirculation,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 84(4), 041906 (2011).
[Crossref] [PubMed]

Mohandas, N.

N. Mohandas, R. M. Hochmuth, and E. E. Spaeth, “Adhesion of red cells to foreign surfaces in the presence of flow,” J. Biomed. Mater. Res. 8(2), 119–136 (1974).
[Crossref] [PubMed]

Montfort, F.

Morales, E.

J. Garay, J. A. D’Angelo, Y. K. Park, C. M. Summa, M. L. Aiken, E. Morales, K. Badizadegan, E. Fiebiger, and B. L. Dickinson, “Crosstalk between PKA and Epac regulates the phenotypic maturation and function of human dendritic cells,” J. Immunol. 185(6), 3227–3238 (2010).
[Crossref] [PubMed]

Mukhija, D.

D. Mukhija and M. J. Solomon, “Translational and rotational dynamics of colloidal rods by direct visualization with confocal microscopy,” J. Colloid Interface Sci. 314(1), 98–106 (2007).
[Crossref] [PubMed]

Nobili, M.

Y. Han, A. M. Alsayed, M. Nobili, J. Zhang, T. C. Lubensky, and A. G. Yodh, “Brownian motion of an ellipsoid,” Science 314(5799), 626–630 (2006).
[Crossref] [PubMed]

Oh, S.

S. Oh, C. Fang-Yen, W. Choi, Z. Yaqoob, D. Fu, Y. K. Park, R. R. Dassari, and M. S. Feld, “Label-Free Imaging of Membrane Potential Using Membrane Electromotility,” Biophys. J. 103(1), 11–18 (2012).
[Crossref] [PubMed]

W. Choi, C. Fang-Yen, K. Badizadegan, S. Oh, N. Lue, R. R. Dasari, and M. S. Feld, “Tomographic phase microscopy,” Nat. Methods 4(9), 717–719 (2007).
[Crossref] [PubMed]

Pan, X.

Park, H.

K. Lee, K. Kim, J. Jung, J. H. Heo, S. Cho, S. Lee, G. Chang, Y. J. Jo, H. Park, and Y. K. Park, “Quantitative phase imaging techniques for the study of cell pathophysiology: from principles to applications,” Sensors (Basel) 13(4), 4170–4191 (2013).
[Crossref] [PubMed]

H. Yu, H. Park, Y. Kim, M. W. Kim, and Y. Park, “Fourier-transform light scattering of individual colloidal clusters,” Opt. Lett. 37(13), 2577–2579 (2012).
[Crossref] [PubMed]

Park, Y.

K. Kim, H. Yoon, M. Diez-Silva, M. Dao, R. R. Dasari, and Y. Park, “High-resolution three-dimensional imaging of red blood cells parasitized by Plasmodium falciparum and in situ hemozoin crystals using optical diffraction tomography,” J. Biomed. Opt. 19(1), 011005 (2014).
[Crossref] [PubMed]

K. Lee, H.-D. Kim, K. Kim, Y. Kim, T. R. Hillman, B. Min, and Y. Park, “Synthetic Fourier transform light scattering,” Opt. Express 21(19), 22453–22463 (2013).
[Crossref] [PubMed]

J. H. Jung, J. Jang, and Y. Park, “Spectro-refractometry of individual microscopic objects using swept-source quantitative phase imaging,” Anal. Chem. 85(21), 10519–10525 (2013).
[Crossref] [PubMed]

H. Yu, H. Park, Y. Kim, M. W. Kim, and Y. Park, “Fourier-transform light scattering of individual colloidal clusters,” Opt. Lett. 37(13), 2577–2579 (2012).
[Crossref] [PubMed]

Y. Jang, J. Jang, and Y. Park, “Dynamic spectroscopic phase microscopy for quantifying hemoglobin concentration and dynamic membrane fluctuation in red blood cells,” Opt. Express 20(9), 9673–9681 (2012).
[Crossref] [PubMed]

S. K. Debnath and Y. Park, “Real-time quantitative phase imaging with a spatial phase-shifting algorithm,” Opt. Lett. 36(23), 4677–4679 (2011).
[Crossref] [PubMed]

R. Chandramohanadas, Y. Park, L. Lui, A. Li, D. Quinn, K. Liew, M. Diez-Silva, Y. Sung, M. Dao, C. T. Lim, P. R. Preiser, and S. Suresh, “Biophysics of malarial parasite exit from infected erythrocytes,” PLoS ONE 6(6), e20869 (2011).
[Crossref] [PubMed]

Y. Park, C. A. Best, T. Kuriabova, M. L. Henle, M. S. Feld, A. J. Levine, and G. Popescu, “Measurement of the nonlinear elasticity of red blood cell membranes,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 83(5), 051925 (2011).
[Crossref] [PubMed]

Y. Park, C. A. Best, T. Auth, N. S. Gov, S. A. Safran, G. Popescu, S. Suresh, and M. S. Feld, “Metabolic remodeling of the human red blood cell membrane,” Proc. Natl. Acad. Sci. U.S.A. 107(4), 1289–1294 (2010).
[Crossref] [PubMed]

Y. Park, T. Yamauchi, W. Choi, R. Dasari, and M. S. Feld, “Spectroscopic phase microscopy for quantifying hemoglobin concentrations in intact red blood cells,” Opt. Lett. 34(23), 3668–3670 (2009).
[Crossref] [PubMed]

G. Popescu, Y. Park, N. Lue, C. Best-Popescu, L. Deflores, R. R. Dasari, M. S. Feld, and K. Badizadegan, “Optical imaging of cell mass and growth dynamics,” Am. J. Physiol. Cell Physiol. 295(2), C538–C544 (2008).
[Crossref] [PubMed]

G. Popescu, Y. Park, W. Choi, R. R. Dasari, M. S. Feld, and K. Badizadegan, “Imaging red blood cell dynamics by quantitative phase microscopy,” Blood Cells Mol. Dis. 41(1), 10–16 (2008).
[Crossref] [PubMed]

Park, Y. K.

K. Lee, K. Kim, J. Jung, J. H. Heo, S. Cho, S. Lee, G. Chang, Y. J. Jo, H. Park, and Y. K. Park, “Quantitative phase imaging techniques for the study of cell pathophysiology: from principles to applications,” Sensors (Basel) 13(4), 4170–4191 (2013).
[Crossref] [PubMed]

S. Oh, C. Fang-Yen, W. Choi, Z. Yaqoob, D. Fu, Y. K. Park, R. R. Dassari, and M. S. Feld, “Label-Free Imaging of Membrane Potential Using Membrane Electromotility,” Biophys. J. 103(1), 11–18 (2012).
[Crossref] [PubMed]

H. S. Byun, T. R. Hillman, J. M. Higgins, M. Diez-Silva, Z. Peng, M. Dao, R. R. Dasari, S. Suresh, and Y. K. Park, “Optical measurement of biomechanical properties of individual erythrocytes from a sickle cell patient,” Acta Biomater. 8(11), 4130–4138 (2012).
[Crossref] [PubMed]

S. Cho, S. Kim, Y. Kim, and Y. K. Park, “Optical imaging techniques for the study of malaria,” Trends Biotechnol. 30(2), 71–79 (2012).
[Crossref] [PubMed]

J. Garay, J. A. D’Angelo, Y. K. Park, C. M. Summa, M. L. Aiken, E. Morales, K. Badizadegan, E. Fiebiger, and B. L. Dickinson, “Crosstalk between PKA and Epac regulates the phenotypic maturation and function of human dendritic cells,” J. Immunol. 185(6), 3227–3238 (2010).
[Crossref] [PubMed]

Y. K. Park, C. A. Best, K. Badizadegan, R. R. Dasari, M. S. Feld, T. Kuriabova, M. L. Henle, A. J. Levine, and G. Popescu, “Measurement of red blood cell mechanics during morphological changes,” Proc. Natl. Acad. Sci. U.S.A. 107(15), 6731–6736 (2010).
[Crossref] [PubMed]

Y. K. Park, M. Diez-Silva, G. Popescu, G. Lykotrafitis, W. S. Choi, M. S. Feld, and S. Suresh, “Refractive index maps and membrane dynamics of human red blood cells parasitized by Plasmodium falciparum,” Proc. Natl. Acad. Sci. U.S.A. 105(37), 13730–13735 (2008).
[Crossref] [PubMed]

Park, Y.-K.

Patel, S.

Peng, Z.

H. S. Byun, T. R. Hillman, J. M. Higgins, M. Diez-Silva, Z. Peng, M. Dao, R. R. Dasari, S. Suresh, and Y. K. Park, “Optical measurement of biomechanical properties of individual erythrocytes from a sickle cell patient,” Acta Biomater. 8(11), 4130–4138 (2012).
[Crossref] [PubMed]

Perry, R. W.

Pham, H.

Phillips, K. G.

K. G. Phillips, S. L. Jacques, and O. J. T. McCarty, “Measurement of Single Cell Refractive Index, Dry Mass, Volume, and Density Using a Transillumination Microscope,” Phys. Rev. Lett. 109(11), 118105 (2012).
[Crossref] [PubMed]

Pine, D. J.

K. V. Edmond, M. T. Elsesser, G. L. Hunter, D. J. Pine, and E. R. Weeks, “Decoupling of rotational and translational diffusion in supercooled colloidal fluids,” Proc. Natl. Acad. Sci. U.S.A. 109(44), 17891–17896 (2012).
[Crossref] [PubMed]

Popescu, G.

B. Bhaduri, H. Pham, M. Mir, and G. Popescu, “Diffraction phase microscopy with white light,” Opt. Lett. 37(6), 1094–1096 (2012).
[Crossref] [PubMed]

B. Bhaduri and G. Popescu, “Derivative method for phase retrieval in off-axis quantitative phase imaging,” Opt. Lett. 37(11), 1868–1870 (2012).
[Crossref] [PubMed]

H. Pham, H. F. Ding, N. Sobh, M. Do, S. Patel, and G. Popescu, “Off-axis quantitative phase imaging processing using CUDA: toward real-time applications,” Biomed. Opt. Express 2(7), 1781–1793 (2011).
[Crossref] [PubMed]

Z. Wang, L. Millet, M. Mir, H. F. Ding, S. Unarunotai, J. Rogers, M. U. Gillette, and G. Popescu, “Spatial light interference microscopy (SLIM),” Opt. Express 19(2), 1016–1026 (2011).
[Crossref] [PubMed]

M. Mir, Z. Wang, Z. Shen, M. Bednarz, R. Bashir, I. Golding, S. G. Prasanth, and G. Popescu, “Optical measurement of cycle-dependent cell growth,” Proc. Natl. Acad. Sci. U.S.A. 108(32), 13124–13129 (2011).
[Crossref] [PubMed]

Y. Park, C. A. Best, T. Kuriabova, M. L. Henle, M. S. Feld, A. J. Levine, and G. Popescu, “Measurement of the nonlinear elasticity of red blood cell membranes,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 83(5), 051925 (2011).
[Crossref] [PubMed]

Y. K. Park, C. A. Best, K. Badizadegan, R. R. Dasari, M. S. Feld, T. Kuriabova, M. L. Henle, A. J. Levine, and G. Popescu, “Measurement of red blood cell mechanics during morphological changes,” Proc. Natl. Acad. Sci. U.S.A. 107(15), 6731–6736 (2010).
[Crossref] [PubMed]

Y. Park, C. A. Best, T. Auth, N. S. Gov, S. A. Safran, G. Popescu, S. Suresh, and M. S. Feld, “Metabolic remodeling of the human red blood cell membrane,” Proc. Natl. Acad. Sci. U.S.A. 107(4), 1289–1294 (2010).
[Crossref] [PubMed]

G. Popescu, Y. Park, W. Choi, R. R. Dasari, M. S. Feld, and K. Badizadegan, “Imaging red blood cell dynamics by quantitative phase microscopy,” Blood Cells Mol. Dis. 41(1), 10–16 (2008).
[Crossref] [PubMed]

Y. K. Park, M. Diez-Silva, G. Popescu, G. Lykotrafitis, W. S. Choi, M. S. Feld, and S. Suresh, “Refractive index maps and membrane dynamics of human red blood cells parasitized by Plasmodium falciparum,” Proc. Natl. Acad. Sci. U.S.A. 105(37), 13730–13735 (2008).
[Crossref] [PubMed]

G. Popescu, Y. Park, N. Lue, C. Best-Popescu, L. Deflores, R. R. Dasari, M. S. Feld, and K. Badizadegan, “Optical imaging of cell mass and growth dynamics,” Am. J. Physiol. Cell Physiol. 295(2), C538–C544 (2008).
[Crossref] [PubMed]

Prasanth, S. G.

M. Mir, Z. Wang, Z. Shen, M. Bednarz, R. Bashir, I. Golding, S. G. Prasanth, and G. Popescu, “Optical measurement of cycle-dependent cell growth,” Proc. Natl. Acad. Sci. U.S.A. 108(32), 13124–13129 (2011).
[Crossref] [PubMed]

Preiser, P. R.

R. Chandramohanadas, Y. Park, L. Lui, A. Li, D. Quinn, K. Liew, M. Diez-Silva, Y. Sung, M. Dao, C. T. Lim, P. R. Preiser, and S. Suresh, “Biophysics of malarial parasite exit from infected erythrocytes,” PLoS ONE 6(6), e20869 (2011).
[Crossref] [PubMed]

Quinn, D.

R. Chandramohanadas, Y. Park, L. Lui, A. Li, D. Quinn, K. Liew, M. Diez-Silva, Y. Sung, M. Dao, C. T. Lim, P. R. Preiser, and S. Suresh, “Biophysics of malarial parasite exit from infected erythrocytes,” PLoS ONE 6(6), e20869 (2011).
[Crossref] [PubMed]

Rinehart, M.

Rogers, J.

Safran, S. A.

Y. Park, C. A. Best, T. Auth, N. S. Gov, S. A. Safran, G. Popescu, S. Suresh, and M. S. Feld, “Metabolic remodeling of the human red blood cell membrane,” Proc. Natl. Acad. Sci. U.S.A. 107(4), 1289–1294 (2010).
[Crossref] [PubMed]

Sampson, D. D.

S. A. Alexandrov, T. R. Hillman, T. Gutzler, and D. D. Sampson, “Synthetic aperture fourier holographic optical microscopy,” Phys. Rev. Lett. 97(16), 168102 (2006).
[Crossref] [PubMed]

Shen, Z.

M. Mir, Z. Wang, Z. Shen, M. Bednarz, R. Bashir, I. Golding, S. G. Prasanth, and G. Popescu, “Optical measurement of cycle-dependent cell growth,” Proc. Natl. Acad. Sci. U.S.A. 108(32), 13124–13129 (2011).
[Crossref] [PubMed]

Sidky, E. Y.

Simon, B.

J. Bailleul, B. Simon, M. Debailleul, H. Liu, and O. Haeberlé, “GPU acceleration towards real-time image reconstruction in 3D tomographic diffractive microscopy,” in Proc. of SPIE Vol(2012), pp. 843707–843701.
[Crossref]

Sobh, N.

Solomon, M. J.

D. Mukhija and M. J. Solomon, “Translational and rotational dynamics of colloidal rods by direct visualization with confocal microscopy,” J. Colloid Interface Sci. 314(1), 98–106 (2007).
[Crossref] [PubMed]

Spaeth, E. E.

N. Mohandas, R. M. Hochmuth, and E. E. Spaeth, “Adhesion of red cells to foreign surfaces in the presence of flow,” J. Biomed. Mater. Res. 8(2), 119–136 (1974).
[Crossref] [PubMed]

Stephens, D. J.

D. J. Stephens and V. J. Allan, “Light Microscopy Techniques for Live Cell Imaging,” Science 300(5616), 82–86 (2003).
[Crossref] [PubMed]

Summa, C. M.

J. Garay, J. A. D’Angelo, Y. K. Park, C. M. Summa, M. L. Aiken, E. Morales, K. Badizadegan, E. Fiebiger, and B. L. Dickinson, “Crosstalk between PKA and Epac regulates the phenotypic maturation and function of human dendritic cells,” J. Immunol. 185(6), 3227–3238 (2010).
[Crossref] [PubMed]

Sung, Y.

Y. Sung, W. Choi, N. Lue, R. R. Dasari, and Z. Yaqoob, “Stain-Free Quantification of Chromosomes in Live Cells Using Regularized Tomographic Phase Microscopy,” PLoS ONE 7(11), e49502 (2012).
[Crossref] [PubMed]

R. Chandramohanadas, Y. Park, L. Lui, A. Li, D. Quinn, K. Liew, M. Diez-Silva, Y. Sung, M. Dao, C. T. Lim, P. R. Preiser, and S. Suresh, “Biophysics of malarial parasite exit from infected erythrocytes,” PLoS ONE 6(6), e20869 (2011).
[Crossref] [PubMed]

Sung, Y. J.

Suresh, S.

H. S. Byun, T. R. Hillman, J. M. Higgins, M. Diez-Silva, Z. Peng, M. Dao, R. R. Dasari, S. Suresh, and Y. K. Park, “Optical measurement of biomechanical properties of individual erythrocytes from a sickle cell patient,” Acta Biomater. 8(11), 4130–4138 (2012).
[Crossref] [PubMed]

R. Chandramohanadas, Y. Park, L. Lui, A. Li, D. Quinn, K. Liew, M. Diez-Silva, Y. Sung, M. Dao, C. T. Lim, P. R. Preiser, and S. Suresh, “Biophysics of malarial parasite exit from infected erythrocytes,” PLoS ONE 6(6), e20869 (2011).
[Crossref] [PubMed]

Y. Park, C. A. Best, T. Auth, N. S. Gov, S. A. Safran, G. Popescu, S. Suresh, and M. S. Feld, “Metabolic remodeling of the human red blood cell membrane,” Proc. Natl. Acad. Sci. U.S.A. 107(4), 1289–1294 (2010).
[Crossref] [PubMed]

Y. K. Park, M. Diez-Silva, G. Popescu, G. Lykotrafitis, W. S. Choi, M. S. Feld, and S. Suresh, “Refractive index maps and membrane dynamics of human red blood cells parasitized by Plasmodium falciparum,” Proc. Natl. Acad. Sci. U.S.A. 105(37), 13730–13735 (2008).
[Crossref] [PubMed]

Sydoruk, O.

O. Zhernovaya, O. Sydoruk, V. Tuchin, and A. Douplik, “The refractive index of human hemoglobin in the visible range,” Phys. Med. Biol. 56(13), 4013–4021 (2011).
[Crossref] [PubMed]

Tahiri, N.

B. Kaoui, N. Tahiri, T. Biben, H. Ez-Zahraouy, A. Benyoussef, G. Biros, and C. Misbah, “Complexity of vesicle microcirculation,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 84(4), 041906 (2011).
[Crossref] [PubMed]

Tuchin, V.

O. Zhernovaya, O. Sydoruk, V. Tuchin, and A. Douplik, “The refractive index of human hemoglobin in the visible range,” Phys. Med. Biol. 56(13), 4013–4021 (2011).
[Crossref] [PubMed]

Unarunotai, S.

Vlahovska, P. M.

X. J. Li, P. M. Vlahovska, and G. E. Karniadakis, “Continuum- and particle-based modeling of shapes and dynamics of red blood cells in health and disease,” Soft Matter 9(1), 28–37 (2012).
[Crossref] [PubMed]

Wang, Z.

Z. Wang, L. Millet, M. Mir, H. F. Ding, S. Unarunotai, J. Rogers, M. U. Gillette, and G. Popescu, “Spatial light interference microscopy (SLIM),” Opt. Express 19(2), 1016–1026 (2011).
[Crossref] [PubMed]

M. Mir, Z. Wang, Z. Shen, M. Bednarz, R. Bashir, I. Golding, S. G. Prasanth, and G. Popescu, “Optical measurement of cycle-dependent cell growth,” Proc. Natl. Acad. Sci. U.S.A. 108(32), 13124–13129 (2011).
[Crossref] [PubMed]

Wax, A.

Weeks, E. R.

K. V. Edmond, M. T. Elsesser, G. L. Hunter, D. J. Pine, and E. R. Weeks, “Decoupling of rotational and translational diffusion in supercooled colloidal fluids,” Proc. Natl. Acad. Sci. U.S.A. 109(44), 17891–17896 (2012).
[Crossref] [PubMed]

Wolf, E.

E. Wolf, “Three-dimensional structure determination of semi-transparent objects from holographic data,” Opt. Commun. 1(153), 4 (1969).
[Crossref]

Wu, T.

T. Wu and J. J. Feng, “Simulation of malaria-infected red blood cells in microfluidic channels: Passage and blockage,” Biomicrofluidics 7, 044115 (2013).

Yamauchi, T.

Yaqoob, Z.

S. Oh, C. Fang-Yen, W. Choi, Z. Yaqoob, D. Fu, Y. K. Park, R. R. Dassari, and M. S. Feld, “Label-Free Imaging of Membrane Potential Using Membrane Electromotility,” Biophys. J. 103(1), 11–18 (2012).
[Crossref] [PubMed]

Y. Sung, W. Choi, N. Lue, R. R. Dasari, and Z. Yaqoob, “Stain-Free Quantification of Chromosomes in Live Cells Using Regularized Tomographic Phase Microscopy,” PLoS ONE 7(11), e49502 (2012).
[Crossref] [PubMed]

D. Fu, W. Choi, Y. J. Sung, Z. Yaqoob, R. R. Dasari, and M. Feld, “Quantitative dispersion microscopy,” Biomed. Opt. Express 1(2), 347–353 (2010).
[Crossref] [PubMed]

Y.-K. Park, W. Choi, Z. Yaqoob, R. Dasari, K. Badizadegan, and M. S. Feld, “Speckle-field digital holographic microscopy,” Opt. Express 17(15), 12285–12292 (2009).
[Crossref] [PubMed]

Yodh, A. G.

Y. Han, A. M. Alsayed, M. Nobili, J. Zhang, T. C. Lubensky, and A. G. Yodh, “Brownian motion of an ellipsoid,” Science 314(5799), 626–630 (2006).
[Crossref] [PubMed]

Yoon, H.

K. Kim, H. Yoon, M. Diez-Silva, M. Dao, R. R. Dasari, and Y. Park, “High-resolution three-dimensional imaging of red blood cells parasitized by Plasmodium falciparum and in situ hemozoin crystals using optical diffraction tomography,” J. Biomed. Opt. 19(1), 011005 (2014).
[Crossref] [PubMed]

Yu, H.

Zhang, J.

Y. Han, A. M. Alsayed, M. Nobili, J. Zhang, T. C. Lubensky, and A. G. Yodh, “Brownian motion of an ellipsoid,” Science 314(5799), 626–630 (2006).
[Crossref] [PubMed]

Zhernovaya, O.

O. Zhernovaya, O. Sydoruk, V. Tuchin, and A. Douplik, “The refractive index of human hemoglobin in the visible range,” Phys. Med. Biol. 56(13), 4013–4021 (2011).
[Crossref] [PubMed]

Zhu, Y. Z.

Zibulevsky, M.

A. M. Bruckstein, M. Elad, and M. Zibulevsky, “On the Uniqueness of Nonnegative Sparse Solutions to Underdetermined Systems of Equations,” IEEE Trans. Inf. Theory 54(11), 4813–4820 (2008).
[Crossref]

Acta Biomater. (1)

H. S. Byun, T. R. Hillman, J. M. Higgins, M. Diez-Silva, Z. Peng, M. Dao, R. R. Dasari, S. Suresh, and Y. K. Park, “Optical measurement of biomechanical properties of individual erythrocytes from a sickle cell patient,” Acta Biomater. 8(11), 4130–4138 (2012).
[Crossref] [PubMed]

Am. J. Physiol. Cell Physiol. (1)

G. Popescu, Y. Park, N. Lue, C. Best-Popescu, L. Deflores, R. R. Dasari, M. S. Feld, and K. Badizadegan, “Optical imaging of cell mass and growth dynamics,” Am. J. Physiol. Cell Physiol. 295(2), C538–C544 (2008).
[Crossref] [PubMed]

Anal. Chem. (1)

J. H. Jung, J. Jang, and Y. Park, “Spectro-refractometry of individual microscopic objects using swept-source quantitative phase imaging,” Anal. Chem. 85(21), 10519–10525 (2013).
[Crossref] [PubMed]

Appl. Opt. (1)

Biomed. Opt. Express (3)

Biomicrofluidics (1)

T. Wu and J. J. Feng, “Simulation of malaria-infected red blood cells in microfluidic channels: Passage and blockage,” Biomicrofluidics 7, 044115 (2013).

Biophys. J. (1)

S. Oh, C. Fang-Yen, W. Choi, Z. Yaqoob, D. Fu, Y. K. Park, R. R. Dassari, and M. S. Feld, “Label-Free Imaging of Membrane Potential Using Membrane Electromotility,” Biophys. J. 103(1), 11–18 (2012).
[Crossref] [PubMed]

Blood Cells Mol. Dis. (1)

G. Popescu, Y. Park, W. Choi, R. R. Dasari, M. S. Feld, and K. Badizadegan, “Imaging red blood cell dynamics by quantitative phase microscopy,” Blood Cells Mol. Dis. 41(1), 10–16 (2008).
[Crossref] [PubMed]

IEEE Trans. Inf. Theory (1)

A. M. Bruckstein, M. Elad, and M. Zibulevsky, “On the Uniqueness of Nonnegative Sparse Solutions to Underdetermined Systems of Equations,” IEEE Trans. Inf. Theory 54(11), 4813–4820 (2008).
[Crossref]

J. Biomed. Mater. Res. (1)

N. Mohandas, R. M. Hochmuth, and E. E. Spaeth, “Adhesion of red cells to foreign surfaces in the presence of flow,” J. Biomed. Mater. Res. 8(2), 119–136 (1974).
[Crossref] [PubMed]

J. Biomed. Opt. (2)

K. Kim, H. Yoon, M. Diez-Silva, M. Dao, R. R. Dasari, and Y. Park, “High-resolution three-dimensional imaging of red blood cells parasitized by Plasmodium falciparum and in situ hemozoin crystals using optical diffraction tomography,” J. Biomed. Opt. 19(1), 011005 (2014).
[Crossref] [PubMed]

C. Fang-Yen, W. Choi, Y. J. Sung, C. J. Holbrow, R. R. Dasari, and M. S. Feld, “Video-rate tomographic phase microscopy,” J. Biomed. Opt. 16(1), 011005 (2011).
[Crossref] [PubMed]

J. Colloid Interface Sci. (1)

D. Mukhija and M. J. Solomon, “Translational and rotational dynamics of colloidal rods by direct visualization with confocal microscopy,” J. Colloid Interface Sci. 314(1), 98–106 (2007).
[Crossref] [PubMed]

J. Immunol. (1)

J. Garay, J. A. D’Angelo, Y. K. Park, C. M. Summa, M. L. Aiken, E. Morales, K. Badizadegan, E. Fiebiger, and B. L. Dickinson, “Crosstalk between PKA and Epac regulates the phenotypic maturation and function of human dendritic cells,” J. Immunol. 185(6), 3227–3238 (2010).
[Crossref] [PubMed]

J. Microsc. (1)

V. Lauer, “New approach to optical diffraction tomography yielding a vector equation of diffraction tomography and a novel tomographic microscope,” J. Microsc. 205(2), 165–176 (2002).
[Crossref] [PubMed]

J. Opt. Soc. Am. A (1)

Nat. Methods (2)

W. Choi, C. Fang-Yen, K. Badizadegan, S. Oh, N. Lue, R. R. Dasari, and M. S. Feld, “Tomographic phase microscopy,” Nat. Methods 4(9), 717–719 (2007).
[Crossref] [PubMed]

J. A. Conchello and J. W. Lichtman, “Optical sectioning microscopy,” Nat. Methods 2(12), 920–931 (2005).
[Crossref] [PubMed]

Opt. Commun. (1)

E. Wolf, “Three-dimensional structure determination of semi-transparent objects from holographic data,” Opt. Commun. 1(153), 4 (1969).
[Crossref]

Opt. Express (6)

Opt. Lett. (6)

Phys. Med. Biol. (1)

O. Zhernovaya, O. Sydoruk, V. Tuchin, and A. Douplik, “The refractive index of human hemoglobin in the visible range,” Phys. Med. Biol. 56(13), 4013–4021 (2011).
[Crossref] [PubMed]

Phys. Rev. E Stat. Nonlin. Soft Matter Phys. (3)

J. Fung and V. N. Manoharan, “Holographic Measurements of Anisotropic Three-Dimensional Diffusion of Colloidal Clusters,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 88(2), 020302 (2013).
[Crossref] [PubMed]

B. Kaoui, N. Tahiri, T. Biben, H. Ez-Zahraouy, A. Benyoussef, G. Biros, and C. Misbah, “Complexity of vesicle microcirculation,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 84(4), 041906 (2011).
[Crossref] [PubMed]

Y. Park, C. A. Best, T. Kuriabova, M. L. Henle, M. S. Feld, A. J. Levine, and G. Popescu, “Measurement of the nonlinear elasticity of red blood cell membranes,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 83(5), 051925 (2011).
[Crossref] [PubMed]

Phys. Rev. Lett. (2)

S. A. Alexandrov, T. R. Hillman, T. Gutzler, and D. D. Sampson, “Synthetic aperture fourier holographic optical microscopy,” Phys. Rev. Lett. 97(16), 168102 (2006).
[Crossref] [PubMed]

K. G. Phillips, S. L. Jacques, and O. J. T. McCarty, “Measurement of Single Cell Refractive Index, Dry Mass, Volume, and Density Using a Transillumination Microscope,” Phys. Rev. Lett. 109(11), 118105 (2012).
[Crossref] [PubMed]

PLoS ONE (2)

Y. Sung, W. Choi, N. Lue, R. R. Dasari, and Z. Yaqoob, “Stain-Free Quantification of Chromosomes in Live Cells Using Regularized Tomographic Phase Microscopy,” PLoS ONE 7(11), e49502 (2012).
[Crossref] [PubMed]

R. Chandramohanadas, Y. Park, L. Lui, A. Li, D. Quinn, K. Liew, M. Diez-Silva, Y. Sung, M. Dao, C. T. Lim, P. R. Preiser, and S. Suresh, “Biophysics of malarial parasite exit from infected erythrocytes,” PLoS ONE 6(6), e20869 (2011).
[Crossref] [PubMed]

Proc. Natl. Acad. Sci. U.S.A. (5)

Y. K. Park, M. Diez-Silva, G. Popescu, G. Lykotrafitis, W. S. Choi, M. S. Feld, and S. Suresh, “Refractive index maps and membrane dynamics of human red blood cells parasitized by Plasmodium falciparum,” Proc. Natl. Acad. Sci. U.S.A. 105(37), 13730–13735 (2008).
[Crossref] [PubMed]

K. V. Edmond, M. T. Elsesser, G. L. Hunter, D. J. Pine, and E. R. Weeks, “Decoupling of rotational and translational diffusion in supercooled colloidal fluids,” Proc. Natl. Acad. Sci. U.S.A. 109(44), 17891–17896 (2012).
[Crossref] [PubMed]

M. Mir, Z. Wang, Z. Shen, M. Bednarz, R. Bashir, I. Golding, S. G. Prasanth, and G. Popescu, “Optical measurement of cycle-dependent cell growth,” Proc. Natl. Acad. Sci. U.S.A. 108(32), 13124–13129 (2011).
[Crossref] [PubMed]

Y. K. Park, C. A. Best, K. Badizadegan, R. R. Dasari, M. S. Feld, T. Kuriabova, M. L. Henle, A. J. Levine, and G. Popescu, “Measurement of red blood cell mechanics during morphological changes,” Proc. Natl. Acad. Sci. U.S.A. 107(15), 6731–6736 (2010).
[Crossref] [PubMed]

Y. Park, C. A. Best, T. Auth, N. S. Gov, S. A. Safran, G. Popescu, S. Suresh, and M. S. Feld, “Metabolic remodeling of the human red blood cell membrane,” Proc. Natl. Acad. Sci. U.S.A. 107(4), 1289–1294 (2010).
[Crossref] [PubMed]

Science (2)

Y. Han, A. M. Alsayed, M. Nobili, J. Zhang, T. C. Lubensky, and A. G. Yodh, “Brownian motion of an ellipsoid,” Science 314(5799), 626–630 (2006).
[Crossref] [PubMed]

D. J. Stephens and V. J. Allan, “Light Microscopy Techniques for Live Cell Imaging,” Science 300(5616), 82–86 (2003).
[Crossref] [PubMed]

Sensors (Basel) (1)

K. Lee, K. Kim, J. Jung, J. H. Heo, S. Cho, S. Lee, G. Chang, Y. J. Jo, H. Park, and Y. K. Park, “Quantitative phase imaging techniques for the study of cell pathophysiology: from principles to applications,” Sensors (Basel) 13(4), 4170–4191 (2013).
[Crossref] [PubMed]

Soft Matter (1)

X. J. Li, P. M. Vlahovska, and G. E. Karniadakis, “Continuum- and particle-based modeling of shapes and dynamics of red blood cells in health and disease,” Soft Matter 9(1), 28–37 (2012).
[Crossref] [PubMed]

Trends Biotechnol. (1)

S. Cho, S. Kim, Y. Kim, and Y. K. Park, “Optical imaging techniques for the study of malaria,” Trends Biotechnol. 30(2), 71–79 (2012).
[Crossref] [PubMed]

Other (7)

J. Bailleul, B. Simon, M. Debailleul, H. Liu, and O. Haeberlé, “GPU acceleration towards real-time image reconstruction in 3D tomographic diffractive microscopy,” in Proc. of SPIE Vol(2012), pp. 843707–843701.
[Crossref]

G. Ortega, J. Lobera, M. Arroyo, I. García, and E. M. Garzon, “High Performance Computing for Optical Diffraction Tomography,” in High Performance Computing and Simulation (HPCS),2012International Conference on(IEEE, 2012), pp. 195–201.
[Crossref]

A. C. Kak and M. Slaney, Principles of computerized tomographic imaging (Siam, 1988).

S. W. Hell, “Far-field optical nanoscopy,” in Single Molecule Spectroscopy in Chemistry, Physics and Biology(2010), pp. 365–398.

G. Popescu, Quantitative Phase Imaging of Cells and Tissues (McGraw-Hill Professional, 2011).

I. Bergoënd, C. Arfire, N. Pavillon, and C. Depeursinge, “Diffraction tomography for biological cells imaging using digital holographic microscopy,” in Laser Applications in Life Sciences 2010(International Society for Optics and Photonics, 2010), pp. 737613–737613–737618.

M. Diez-Silva, Y. Park, S. Huang, O. Mercereau-Puijalon, G. Deplaine, C. Lavazec, S. Perrot, S. Bonnefoy, M. Dao, M. S. Feld, J. Han, and S. Suresh, “Pf155/RESA protein influences the dynamic microcirculatory behavior of ring-stage Plasmodium falciparum infected red blood cells,” Sci Rep (2012).

Supplementary Material (2)

» Media 1: MPG (2640 KB)     
» Media 2: MPG (1064 KB)     

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Figures (5)

Fig. 1
Fig. 1

The schematic diagram of real-time tomography. (a) Experimental setup for illuminating samples from different angles. (b) Retrieved phase of a typical RBC from 10 different illumination angles. (c) Retrieved complex optical fields are transferred to GPU memory, and the 2-D Fourier transform of each complex field is mapped in 3-D Fourier space according to Fourier diffraction theory. (d) An iterative non-negative constraint processing method is implemented for filling the rest of 3-D space. (e) A 3-D inverse Fourier transform yields 3-D complex RI distribution of a RBC. The scale bar in (b) indicates 5 μm.

Fig. 2
Fig. 2

(a) Cross-correlation coefficient of 3-D RI tomograms reconstructed from 500 illuminations and a reduced number of illuminations. The inset shows the same data in log scale. (b) Cross-sectional images of the x-y plane of the reconstructed tomogram with the cross-correlation coefficients as a function of the number of illuminations used for the reconstruction. The red box indicates the tomogram reconstructed with 10 illuminations.

Fig. 3
Fig. 3

3-D rendering of the RI surfaces of (a) a polystyrene bead and (e) a RBC. For visualization purpose, the threshold for the iso-surfaces is set to the 70% of the maximum RI value. (b-d) cross-sectional slices of RI distribution of the polystyrene bead in the x-y, y-z and x-z planes, respectively. (f-h) cross-sectional slices of RI distribution of the RBC in the x-y, y-z and x-z planes, respectively.

Fig. 4
Fig. 4

The real-time measurement and visualization of the 3-D trajectory and orientation of Brownian motion of a PMMA dimer. Colored lines indicate orientation of the dimer in each tomogram. Each color corresponds to the position in the z-axis. Black dashed lines indicate the trajectory of dimer centroids. The dimer in the initial and final positions are indicated as a red and blue isosurface, respectively. Real-time visualization of the Brownian motion of the dimer is presented in Media 1.

Fig. 5
Fig. 5

Reconstructed 3-D RI tomogram for a RBC under a flow rate along the applied flow direction (a). The RBC in (b) stationary fluid, (c) accelerating flow rate with the maximum rate, and (d) decelerating fluid with zero rate. (left) 3D rendering of the RI surfaces of RBCs (three right panels) Optical phase delay of red blood cells in the x-y, x-z and y-z planes, respectively. The dashed lines indicate the initial shape of the RBC. Real-time visualization of the motion of the RBC under the shear flow is also presented in Media 2.

Tables (1)

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Table 1 Computation Time for Tomogram Reconstruction using CPU and GPU

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