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A. J. Chaudhari, F. Darvas, J. R. Bading, R. A. Moats, P. S. Conti, D. J. Smith, S. R. Cherry, and R. M. Leahy, “Hyperspectral and multispectral bioluminescence optical tomography for small animal imaging,” Phys. Med. Biol. 50(23), 5421–5441 (2005).

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[CrossRef]
[PubMed]

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[CrossRef]

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[CrossRef]
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G. Wang, X. Qian, W. Cong, H. Shen, Y. Li, W. Han, K. Durairaj, M. Jiang, T. Zhou, J. Cheng, J. Tian, Y. Lv, H. Li, and J. Luo, “Recent development in bioluminescence tomography,” Current Medical Imaging Reviews 2(4), 453–457 (2006).

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[CrossRef]

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[CrossRef]
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[CrossRef]
[PubMed]

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[CrossRef]
[PubMed]

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[CrossRef]
[PubMed]

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[CrossRef]

A. J. Chaudhari, F. Darvas, J. R. Bading, R. A. Moats, P. S. Conti, D. J. Smith, S. R. Cherry, and R. M. Leahy, “Hyperspectral and multispectral bioluminescence optical tomography for small animal imaging,” Phys. Med. Biol. 50(23), 5421–5441 (2005).

[CrossRef]
[PubMed]

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[CrossRef]
[PubMed]

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[CrossRef]

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[CrossRef]
[PubMed]

G. Wang, X. Qian, W. Cong, H. Shen, Y. Li, W. Han, K. Durairaj, M. Jiang, T. Zhou, J. Cheng, J. Tian, Y. Lv, H. Li, and J. Luo, “Recent development in bioluminescence tomography,” Current Medical Imaging Reviews 2(4), 453–457 (2006).

[CrossRef]

G. Wang, H. Shen, K. Durairaj, X. Qian, and W. Cong, “The first bioluminescence tomography system for simultaneous acquisition of multi-view and multi-spectral data,” Int. J. Biomed. Imaging 2006, 1–8 (2006).

[CrossRef]

G. Wang, W. Cong, K. Durairaj, X. Qian, H. Shen, P. Sinn, E. Hoffman, G. McLennan, and M. Henry, “In vivo mouse studies with bioluminescence tomography,” Opt. Express 14(17), 7801–7809 (2006).

[CrossRef]
[PubMed]

H. Gao and H. K. Zhao, “A fast forward solver of radiative transfer equation,” Transp. Theory Stat. Phys. 38(3), 149–192 (2009).

[CrossRef]

W. Yin, S. Osher, D. Goldfarb, and J. Darbon, “Bregman iterative algorithms for l1-minimization with applications to compressed sensing,” SIAM J. Imaging Sciences 1(1), 143–168 (2008).

[CrossRef]

T. Goldstein and S. Osher, “The split bregman method for l1 regularized problems,” SIAM J. Imaging Sci. 2(2), 323–343 (2009).

[CrossRef]

S. J. Kim, K. Koh, M. Lustig, S. Boyd, and D. Gorinevsky, “An Interior-Point Method for Large-Scale l1-Regularized Least Squares,” IEEE J. Sel. Top. Signal Process. 1(4), 606–617 (2007).

[CrossRef]

X. Gu, Q. Zhang, L. Larcom, and H. Jiang, “Three-dimensional bioluminescence tomography with model-based reconstruction,” Opt. Express 12(17), 3996–4000 (2004).

[CrossRef]
[PubMed]

G. Wang, X. Qian, W. Cong, H. Shen, Y. Li, W. Han, K. Durairaj, M. Jiang, T. Zhou, J. Cheng, J. Tian, Y. Lv, H. Li, and J. Luo, “Recent development in bioluminescence tomography,” Current Medical Imaging Reviews 2(4), 453–457 (2006).

[CrossRef]

G. Wang, W. Cong, K. Durairaj, X. Qian, H. Shen, P. Sinn, E. Hoffman, G. McLennan, and M. Henry, “In vivo mouse studies with bioluminescence tomography,” Opt. Express 14(17), 7801–7809 (2006).

[CrossRef]
[PubMed]

A. D. Klose, V. Ntziachristos, and A. H. Hielscher, “The inverse source problem based on the radiative transfer equation in optical molecular imaging,” J. Comput. Phys. 202(1), 323–345 (2005).

[CrossRef]

G. Wang, W. Cong, K. Durairaj, X. Qian, H. Shen, P. Sinn, E. Hoffman, G. McLennan, and M. Henry, “In vivo mouse studies with bioluminescence tomography,” Opt. Express 14(17), 7801–7809 (2006).

[CrossRef]
[PubMed]

W. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. Wang, E. Hoffman, G. McLennan, P. McCray, J. Zabner, and A. Cong, “Practical reconstruction method for bioluminescence tomography,” Opt. Express 13(18), 6756–6771 (2005).

[CrossRef]
[PubMed]

G. Wang, E. A. Hoffman, G. McLennan, L. V. Wang, M. Suter, and J. Meinel, “Development of the first bioluminescent CT scanner,” Radiology 229(P), 566 (2003).

X. Gu, Q. Zhang, L. Larcom, and H. Jiang, “Three-dimensional bioluminescence tomography with model-based reconstruction,” Opt. Express 12(17), 3996–4000 (2004).

[CrossRef]
[PubMed]

G. Wang, X. Qian, W. Cong, H. Shen, Y. Li, W. Han, K. Durairaj, M. Jiang, T. Zhou, J. Cheng, J. Tian, Y. Lv, H. Li, and J. Luo, “Recent development in bioluminescence tomography,” Current Medical Imaging Reviews 2(4), 453–457 (2006).

[CrossRef]

W. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. Wang, E. Hoffman, G. McLennan, P. McCray, J. Zabner, and A. Cong, “Practical reconstruction method for bioluminescence tomography,” Opt. Express 13(18), 6756–6771 (2005).

[CrossRef]
[PubMed]

G. Wang, Y. Li, and M. Jiang, “Uniqueness theorems in bioluminescence tomography,” Med. Phys. 31(8), 2289–2299 (2004).

[CrossRef]
[PubMed]

H. Dehghani, S. C. Davis, S. Jiang, B. W. Pogue, K. D. Paulsen, and M. S. Patterson, “Spectrally resolved bioluminescence optical tomography,” Opt. Lett. 31(3), 365–367 (2006).

[CrossRef]
[PubMed]

A. Charette, J. Boulanger, and H. K. Kim, “An overview on recent radiation transport algorithm development for optical tomography imaging,” J. Quant. Spectrosc. Radiat. Transf. 109(17-18), 2743–2766 (2008).

[CrossRef]

S. J. Kim, K. Koh, M. Lustig, S. Boyd, and D. Gorinevsky, “An Interior-Point Method for Large-Scale l1-Regularized Least Squares,” IEEE J. Sel. Top. Signal Process. 1(4), 606–617 (2007).

[CrossRef]

A. D. Klose, V. Ntziachristos, and A. H. Hielscher, “The inverse source problem based on the radiative transfer equation in optical molecular imaging,” J. Comput. Phys. 202(1), 323–345 (2005).

[CrossRef]

S. J. Kim, K. Koh, M. Lustig, S. Boyd, and D. Gorinevsky, “An Interior-Point Method for Large-Scale l1-Regularized Least Squares,” IEEE J. Sel. Top. Signal Process. 1(4), 606–617 (2007).

[CrossRef]

W. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. Wang, E. Hoffman, G. McLennan, P. McCray, J. Zabner, and A. Cong, “Practical reconstruction method for bioluminescence tomography,” Opt. Express 13(18), 6756–6771 (2005).

[CrossRef]
[PubMed]

C. Kuo, O. Coquoz, T. Troy, D. Zwarg, and B. Rice, “Bioluminescent tomography for in vivo localization and quantification of luminescent sources from a multiple-view imaging system,” Mol. Imaging 4, 370 (2005).

X. Gu, Q. Zhang, L. Larcom, and H. Jiang, “Three-dimensional bioluminescence tomography with model-based reconstruction,” Opt. Express 12(17), 3996–4000 (2004).

[CrossRef]
[PubMed]

A. J. Chaudhari, F. Darvas, J. R. Bading, R. A. Moats, P. S. Conti, D. J. Smith, S. R. Cherry, and R. M. Leahy, “Hyperspectral and multispectral bioluminescence optical tomography for small animal imaging,” Phys. Med. Biol. 50(23), 5421–5441 (2005).

[CrossRef]
[PubMed]

K. Levenberg, “A method for the solution of certain nonlinear problems in least squares,” Q. Appl. Math. 2, 164–168 (1944).

G. Wang, X. Qian, W. Cong, H. Shen, Y. Li, W. Han, K. Durairaj, M. Jiang, T. Zhou, J. Cheng, J. Tian, Y. Lv, H. Li, and J. Luo, “Recent development in bioluminescence tomography,” Current Medical Imaging Reviews 2(4), 453–457 (2006).

[CrossRef]

Y. Lv, J. Tian, W. X. Cong, G. Wang, J. Luo, W. Yang, H. Li, and H. Li, “A multilevel adaptive finite element algorithm for bioluminescence tomography,” Opt. Express 14(18), 8211–8223 (2006).

[CrossRef]
[PubMed]

Y. Lv, J. Tian, W. X. Cong, G. Wang, J. Luo, W. Yang, H. Li, and H. Li, “A multilevel adaptive finite element algorithm for bioluminescence tomography,” Opt. Express 14(18), 8211–8223 (2006).

[CrossRef]
[PubMed]

G. Wang, X. Qian, W. Cong, H. Shen, Y. Li, W. Han, K. Durairaj, M. Jiang, T. Zhou, J. Cheng, J. Tian, Y. Lv, H. Li, and J. Luo, “Recent development in bioluminescence tomography,” Current Medical Imaging Reviews 2(4), 453–457 (2006).

[CrossRef]

G. Wang, Y. Li, and M. Jiang, “Uniqueness theorems in bioluminescence tomography,” Med. Phys. 31(8), 2289–2299 (2004).

[CrossRef]
[PubMed]

W. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. Wang, E. Hoffman, G. McLennan, P. McCray, J. Zabner, and A. Cong, “Practical reconstruction method for bioluminescence tomography,” Opt. Express 13(18), 6756–6771 (2005).

[CrossRef]
[PubMed]

Y. Lu, X. Zhang, A. Douraghy, D. Stout, J. Tian, T. F. Chan, and A. F. Chatziioannou, “Source reconstruction for spectrally-resolved bioluminescence tomography with sparse a priori information,” Opt. Express 17(10), 8062–8080 (2009).

[CrossRef]
[PubMed]

G. Wang, X. Qian, W. Cong, H. Shen, Y. Li, W. Han, K. Durairaj, M. Jiang, T. Zhou, J. Cheng, J. Tian, Y. Lv, H. Li, and J. Luo, “Recent development in bioluminescence tomography,” Current Medical Imaging Reviews 2(4), 453–457 (2006).

[CrossRef]

Y. Lv, J. Tian, W. X. Cong, G. Wang, J. Luo, W. Yang, H. Li, and H. Li, “A multilevel adaptive finite element algorithm for bioluminescence tomography,” Opt. Express 14(18), 8211–8223 (2006).

[CrossRef]
[PubMed]

S. J. Kim, K. Koh, M. Lustig, S. Boyd, and D. Gorinevsky, “An Interior-Point Method for Large-Scale l1-Regularized Least Squares,” IEEE J. Sel. Top. Signal Process. 1(4), 606–617 (2007).

[CrossRef]

Y. Lv, J. Tian, W. Cong, and G. Wang, “Experimental study on bioluminescence tomography with multimodality fusion,” Int. J. Biomed. Imaging 2007, 86741 (2007).

[CrossRef]

Y. Lv, J. Tian, W. X. Cong, G. Wang, J. Luo, W. Yang, H. Li, and H. Li, “A multilevel adaptive finite element algorithm for bioluminescence tomography,” Opt. Express 14(18), 8211–8223 (2006).

[CrossRef]
[PubMed]

G. Wang, X. Qian, W. Cong, H. Shen, Y. Li, W. Han, K. Durairaj, M. Jiang, T. Zhou, J. Cheng, J. Tian, Y. Lv, H. Li, and J. Luo, “Recent development in bioluminescence tomography,” Current Medical Imaging Reviews 2(4), 453–457 (2006).

[CrossRef]

R. Weissleder and U. U. Mahmood, “Molecular imaging,” Radiology 219(2), 316–333 (2001).

[PubMed]

S. Osher, Y. Mao, B. Dong, and W. Yin, “Fast linearized Bregman iteration for compressed sensing and sparse denoising,” Commun. Math. Sci. (to be published).

V. Markel and J. Schotland, “Fourier-laplace structure of the linearized inverse scattering problem for the radiative transport equation,” Inv. Prob. Imag. 1, 181–189 (2007).

[CrossRef]

D. W. Marquardt, “An algorithm for least-squares estimation of nonlinear parameters,” J. Soc. Ind. Appl. Math. 11(2), 431–441 (1963).

[CrossRef]

M. Boffety, M. Allain, A. Sentenac, M. Massonneau, and R. Carminati, “Analysis of the depth resolution limit of luminescence diffuse optical imaging,” Opt. Lett. 33(20), 2290–2292 (2008).

[CrossRef]
[PubMed]

Z. Tao, N. J. McCormick, and R. Sanchez, “Ocean source and optical property estimation from explicit and implicit algorithms,” Appl. Opt. 33(15), 3265 (1994).

[CrossRef]
[PubMed]

N. J. McCormick, “Inverse radiative transfer problems: a review,” Nucl. Sci. Eng. 112, 185–198 (1992).

W. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. Wang, E. Hoffman, G. McLennan, P. McCray, J. Zabner, and A. Cong, “Practical reconstruction method for bioluminescence tomography,” Opt. Express 13(18), 6756–6771 (2005).

[CrossRef]
[PubMed]

G. Wang, W. Cong, K. Durairaj, X. Qian, H. Shen, P. Sinn, E. Hoffman, G. McLennan, and M. Henry, “In vivo mouse studies with bioluminescence tomography,” Opt. Express 14(17), 7801–7809 (2006).

[CrossRef]
[PubMed]

W. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. Wang, E. Hoffman, G. McLennan, P. McCray, J. Zabner, and A. Cong, “Practical reconstruction method for bioluminescence tomography,” Opt. Express 13(18), 6756–6771 (2005).

[CrossRef]
[PubMed]

G. Wang, E. A. Hoffman, G. McLennan, L. V. Wang, M. Suter, and J. Meinel, “Development of the first bioluminescent CT scanner,” Radiology 229(P), 566 (2003).

K. D. Paulsen, P. M. Meaney, M. J. Moskowitz, and J. R. Sullivan, “A dual mesh scheme for finite element based reconstruction algorithms,” IEEE Trans. Med. Imaging 14(3), 504–514 (1995).

[CrossRef]
[PubMed]

G. Wang, E. A. Hoffman, G. McLennan, L. V. Wang, M. Suter, and J. Meinel, “Development of the first bioluminescent CT scanner,” Radiology 229(P), 566 (2003).

A. J. Chaudhari, F. Darvas, J. R. Bading, R. A. Moats, P. S. Conti, D. J. Smith, S. R. Cherry, and R. M. Leahy, “Hyperspectral and multispectral bioluminescence optical tomography for small animal imaging,” Phys. Med. Biol. 50(23), 5421–5441 (2005).

[CrossRef]
[PubMed]

K. D. Paulsen, P. M. Meaney, M. J. Moskowitz, and J. R. Sullivan, “A dual mesh scheme for finite element based reconstruction algorithms,” IEEE Trans. Med. Imaging 14(3), 504–514 (1995).

[CrossRef]
[PubMed]

A. D. Klose, V. Ntziachristos, and A. H. Hielscher, “The inverse source problem based on the radiative transfer equation in optical molecular imaging,” J. Comput. Phys. 202(1), 323–345 (2005).

[CrossRef]

T. Goldstein and S. Osher, “The split bregman method for l1 regularized problems,” SIAM J. Imaging Sci. 2(2), 323–343 (2009).

[CrossRef]

W. Yin, S. Osher, D. Goldfarb, and J. Darbon, “Bregman iterative algorithms for l1-minimization with applications to compressed sensing,” SIAM J. Imaging Sciences 1(1), 143–168 (2008).

[CrossRef]

S. Osher, Y. Mao, B. Dong, and W. Yin, “Fast linearized Bregman iteration for compressed sensing and sparse denoising,” Commun. Math. Sci. (to be published).

A. N. Panchenko, “Inverse source problem of radiative transfer: a special case of the attenuated Radon transform,” Inverse Probl. 9(2), 321–337 (1993).

[CrossRef]

H. Dehghani, S. C. Davis, S. Jiang, B. W. Pogue, K. D. Paulsen, and M. S. Patterson, “Spectrally resolved bioluminescence optical tomography,” Opt. Lett. 31(3), 365–367 (2006).

[CrossRef]
[PubMed]

H. Dehghani, S. C. Davis, S. Jiang, B. W. Pogue, K. D. Paulsen, and M. S. Patterson, “Spectrally resolved bioluminescence optical tomography,” Opt. Lett. 31(3), 365–367 (2006).

[CrossRef]
[PubMed]

K. D. Paulsen, P. M. Meaney, M. J. Moskowitz, and J. R. Sullivan, “A dual mesh scheme for finite element based reconstruction algorithms,” IEEE Trans. Med. Imaging 14(3), 504–514 (1995).

[CrossRef]
[PubMed]

H. Dehghani, S. C. Davis, S. Jiang, B. W. Pogue, K. D. Paulsen, and M. S. Patterson, “Spectrally resolved bioluminescence optical tomography,” Opt. Lett. 31(3), 365–367 (2006).

[CrossRef]
[PubMed]

G. Wang, H. Shen, K. Durairaj, X. Qian, and W. Cong, “The first bioluminescence tomography system for simultaneous acquisition of multi-view and multi-spectral data,” Int. J. Biomed. Imaging 2006, 1–8 (2006).

[CrossRef]

G. Wang, X. Qian, W. Cong, H. Shen, Y. Li, W. Han, K. Durairaj, M. Jiang, T. Zhou, J. Cheng, J. Tian, Y. Lv, H. Li, and J. Luo, “Recent development in bioluminescence tomography,” Current Medical Imaging Reviews 2(4), 453–457 (2006).

[CrossRef]

G. Wang, W. Cong, K. Durairaj, X. Qian, H. Shen, P. Sinn, E. Hoffman, G. McLennan, and M. Henry, “In vivo mouse studies with bioluminescence tomography,” Opt. Express 14(17), 7801–7809 (2006).

[CrossRef]
[PubMed]

G. Alexandrakis, F. R. Rannou, and A. F. Chatziioannou, “Tomographic bioluminescence imaging by use of a combined optical-PET (OPET) system: a computer simulation feasibility study,” Phys. Med. Biol. 50(17), 4225–4241 (2005).

[CrossRef]
[PubMed]

C. Kuo, O. Coquoz, T. Troy, D. Zwarg, and B. Rice, “Bioluminescent tomography for in vivo localization and quantification of luminescent sources from a multiple-view imaging system,” Mol. Imaging 4, 370 (2005).

E. J. Candes, J. Romberg, and T. Tao, “Stable signal recovery from incomplete and inaccurate measurements,” Commun. Pure Appl. Math. 59(8), 1207–1223 (2006).

[CrossRef]

E. J. Candes, J. Romberg, and T. Tao, “Robust uncertainty principles: exact signal reconstruction from highly incomplete frequency information,” IEEE Trans. Inf. Theory 52(2), 489–509 (2006).

[CrossRef]

C. H. Contag and B. D. Ross, “It’s not just about anatomy: in vivo bioluminescence imaging as an eyepiece into biology,” J. Magn. Reson. Imaging 16(4), 378–387 (2002).

[CrossRef]
[PubMed]

Z. Tao, N. J. McCormick, and R. Sanchez, “Ocean source and optical property estimation from explicit and implicit algorithms,” Appl. Opt. 33(15), 3265 (1994).

[CrossRef]
[PubMed]

V. Markel and J. Schotland, “Fourier-laplace structure of the linearized inverse scattering problem for the radiative transport equation,” Inv. Prob. Imag. 1, 181–189 (2007).

[CrossRef]

M. Boffety, M. Allain, A. Sentenac, M. Massonneau, and R. Carminati, “Analysis of the depth resolution limit of luminescence diffuse optical imaging,” Opt. Lett. 33(20), 2290–2292 (2008).

[CrossRef]
[PubMed]

G. Wang, W. Cong, K. Durairaj, X. Qian, H. Shen, P. Sinn, E. Hoffman, G. McLennan, and M. Henry, “In vivo mouse studies with bioluminescence tomography,” Opt. Express 14(17), 7801–7809 (2006).

[CrossRef]
[PubMed]

G. Wang, X. Qian, W. Cong, H. Shen, Y. Li, W. Han, K. Durairaj, M. Jiang, T. Zhou, J. Cheng, J. Tian, Y. Lv, H. Li, and J. Luo, “Recent development in bioluminescence tomography,” Current Medical Imaging Reviews 2(4), 453–457 (2006).

[CrossRef]

G. Wang, H. Shen, K. Durairaj, X. Qian, and W. Cong, “The first bioluminescence tomography system for simultaneous acquisition of multi-view and multi-spectral data,” Int. J. Biomed. Imaging 2006, 1–8 (2006).

[CrossRef]

C. E. Siewert, “An inverse source problem in radiative transfer,” J. Quant. Spectrosc. Radiat. Transf. 50(6), 603–609 (1993).

[CrossRef]

G. Wang, W. Cong, K. Durairaj, X. Qian, H. Shen, P. Sinn, E. Hoffman, G. McLennan, and M. Henry, “In vivo mouse studies with bioluminescence tomography,” Opt. Express 14(17), 7801–7809 (2006).

[CrossRef]
[PubMed]

A. J. Chaudhari, F. Darvas, J. R. Bading, R. A. Moats, P. S. Conti, D. J. Smith, S. R. Cherry, and R. M. Leahy, “Hyperspectral and multispectral bioluminescence optical tomography for small animal imaging,” Phys. Med. Biol. 50(23), 5421–5441 (2005).

[CrossRef]
[PubMed]

P. Stefanov and G. Uhlmann, “An inverse source problem in optical molecular imaging,” Analysis and PDE 1, 115–126 (2008).

[CrossRef]

Y. Lu, X. Zhang, A. Douraghy, D. Stout, J. Tian, T. F. Chan, and A. F. Chatziioannou, “Source reconstruction for spectrally-resolved bioluminescence tomography with sparse a priori information,” Opt. Express 17(10), 8062–8080 (2009).

[CrossRef]
[PubMed]

K. D. Paulsen, P. M. Meaney, M. J. Moskowitz, and J. R. Sullivan, “A dual mesh scheme for finite element based reconstruction algorithms,” IEEE Trans. Med. Imaging 14(3), 504–514 (1995).

[CrossRef]
[PubMed]

G. Wang, E. A. Hoffman, G. McLennan, L. V. Wang, M. Suter, and J. Meinel, “Development of the first bioluminescent CT scanner,” Radiology 229(P), 566 (2003).

G. Bal and A. Tamasan, “Inverse source problems in transport equations,” SIAM J. Math. Anal. 39(1), 57–76 (2007).

[CrossRef]

E. J. Candes, J. Romberg, and T. Tao, “Robust uncertainty principles: exact signal reconstruction from highly incomplete frequency information,” IEEE Trans. Inf. Theory 52(2), 489–509 (2006).

[CrossRef]

E. J. Candes, J. Romberg, and T. Tao, “Stable signal recovery from incomplete and inaccurate measurements,” Commun. Pure Appl. Math. 59(8), 1207–1223 (2006).

[CrossRef]

E. J. Candes and T. Tao, “Near optimal signal recovery from random projections: universal encoding strategies,” IEEE Trans. Inf. Theory 52(12), 5406–5425 (2006).

[CrossRef]

E. J. Candes and T. Tao, “Decoding by linear programming,” IEEE Trans. Inf. Theory 51(12), 4203–4215 (2005).

[CrossRef]

Z. Tao, N. J. McCormick, and R. Sanchez, “Ocean source and optical property estimation from explicit and implicit algorithms,” Appl. Opt. 33(15), 3265 (1994).

[CrossRef]
[PubMed]

Y. Lu, X. Zhang, A. Douraghy, D. Stout, J. Tian, T. F. Chan, and A. F. Chatziioannou, “Source reconstruction for spectrally-resolved bioluminescence tomography with sparse a priori information,” Opt. Express 17(10), 8062–8080 (2009).

[CrossRef]
[PubMed]

Y. Lv, J. Tian, W. Cong, and G. Wang, “Experimental study on bioluminescence tomography with multimodality fusion,” Int. J. Biomed. Imaging 2007, 86741 (2007).

[CrossRef]

Y. Lv, J. Tian, W. X. Cong, G. Wang, J. Luo, W. Yang, H. Li, and H. Li, “A multilevel adaptive finite element algorithm for bioluminescence tomography,” Opt. Express 14(18), 8211–8223 (2006).

[CrossRef]
[PubMed]

G. Wang, X. Qian, W. Cong, H. Shen, Y. Li, W. Han, K. Durairaj, M. Jiang, T. Zhou, J. Cheng, J. Tian, Y. Lv, H. Li, and J. Luo, “Recent development in bioluminescence tomography,” Current Medical Imaging Reviews 2(4), 453–457 (2006).

[CrossRef]

R. Tibshirani, “Regression shrinkage and selection via the Lasso,” J. R. Stat. Soc., B 58, 267–288 (1996).

C. Kuo, O. Coquoz, T. Troy, D. Zwarg, and B. Rice, “Bioluminescent tomography for in vivo localization and quantification of luminescent sources from a multiple-view imaging system,” Mol. Imaging 4, 370 (2005).

P. Stefanov and G. Uhlmann, “An inverse source problem in optical molecular imaging,” Analysis and PDE 1, 115–126 (2008).

[CrossRef]

E. J. Candes and M. B. Wakin, “A introduction to compressive sampling,” IEEE Signal Process. Mag. 25(2), 21–30 (2008).

[CrossRef]

Y. Lv, J. Tian, W. Cong, and G. Wang, “Experimental study on bioluminescence tomography with multimodality fusion,” Int. J. Biomed. Imaging 2007, 86741 (2007).

[CrossRef]

G. Wang, W. Cong, K. Durairaj, X. Qian, H. Shen, P. Sinn, E. Hoffman, G. McLennan, and M. Henry, “In vivo mouse studies with bioluminescence tomography,” Opt. Express 14(17), 7801–7809 (2006).

[CrossRef]
[PubMed]

G. Wang, H. Shen, K. Durairaj, X. Qian, and W. Cong, “The first bioluminescence tomography system for simultaneous acquisition of multi-view and multi-spectral data,” Int. J. Biomed. Imaging 2006, 1–8 (2006).

[CrossRef]

G. Wang, X. Qian, W. Cong, H. Shen, Y. Li, W. Han, K. Durairaj, M. Jiang, T. Zhou, J. Cheng, J. Tian, Y. Lv, H. Li, and J. Luo, “Recent development in bioluminescence tomography,” Current Medical Imaging Reviews 2(4), 453–457 (2006).

[CrossRef]

Y. Lv, J. Tian, W. X. Cong, G. Wang, J. Luo, W. Yang, H. Li, and H. Li, “A multilevel adaptive finite element algorithm for bioluminescence tomography,” Opt. Express 14(18), 8211–8223 (2006).

[CrossRef]
[PubMed]

W. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. Wang, E. Hoffman, G. McLennan, P. McCray, J. Zabner, and A. Cong, “Practical reconstruction method for bioluminescence tomography,” Opt. Express 13(18), 6756–6771 (2005).

[CrossRef]
[PubMed]

G. Wang, Y. Li, and M. Jiang, “Uniqueness theorems in bioluminescence tomography,” Med. Phys. 31(8), 2289–2299 (2004).

[CrossRef]
[PubMed]

G. Wang, E. A. Hoffman, G. McLennan, L. V. Wang, M. Suter, and J. Meinel, “Development of the first bioluminescent CT scanner,” Radiology 229(P), 566 (2003).

W. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. Wang, E. Hoffman, G. McLennan, P. McCray, J. Zabner, and A. Cong, “Practical reconstruction method for bioluminescence tomography,” Opt. Express 13(18), 6756–6771 (2005).

[CrossRef]
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[CrossRef]

G. Wang, E. A. Hoffman, G. McLennan, L. V. Wang, M. Suter, and J. Meinel, “Development of the first bioluminescent CT scanner,” Radiology 229(P), 566 (2003).

R. Weissleder and U. U. Mahmood, “Molecular imaging,” Radiology 219(2), 316–333 (2001).

[PubMed]

M. Xu and L. V. Wang, “Photoacoustic imaging in biomedicine,” Rev. Sci. Instrum. 77, 041101–1-041101–22 (2006).

[CrossRef]

J. Yang, Y. Zhang, and W. Yin, “An Efficient TVL1 Algorithm for Deblurring Multichannel Images Corrupted by Impulsive Noise,” SIAM J. Sci. Comput. 31(4), 2842–2865 (2009).

[CrossRef]

Y. Lv, J. Tian, W. X. Cong, G. Wang, J. Luo, W. Yang, H. Li, and H. Li, “A multilevel adaptive finite element algorithm for bioluminescence tomography,” Opt. Express 14(18), 8211–8223 (2006).

[CrossRef]
[PubMed]

J. Yang, Y. Zhang, and W. Yin, “An Efficient TVL1 Algorithm for Deblurring Multichannel Images Corrupted by Impulsive Noise,” SIAM J. Sci. Comput. 31(4), 2842–2865 (2009).

[CrossRef]

W. Yin, S. Osher, D. Goldfarb, and J. Darbon, “Bregman iterative algorithms for l1-minimization with applications to compressed sensing,” SIAM J. Imaging Sciences 1(1), 143–168 (2008).

[CrossRef]

S. Osher, Y. Mao, B. Dong, and W. Yin, “Fast linearized Bregman iteration for compressed sensing and sparse denoising,” Commun. Math. Sci. (to be published).

P. Zhao and B. Yu, “On model selection consistency of Lasso,” J. Mach. Learn. Res. 7, 2541–2563 (2006).

W. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. Wang, E. Hoffman, G. McLennan, P. McCray, J. Zabner, and A. Cong, “Practical reconstruction method for bioluminescence tomography,” Opt. Express 13(18), 6756–6771 (2005).

[CrossRef]
[PubMed]

X. Gu, Q. Zhang, L. Larcom, and H. Jiang, “Three-dimensional bioluminescence tomography with model-based reconstruction,” Opt. Express 12(17), 3996–4000 (2004).

[CrossRef]
[PubMed]

Y. Lu, X. Zhang, A. Douraghy, D. Stout, J. Tian, T. F. Chan, and A. F. Chatziioannou, “Source reconstruction for spectrally-resolved bioluminescence tomography with sparse a priori information,” Opt. Express 17(10), 8062–8080 (2009).

[CrossRef]
[PubMed]

J. Yang, Y. Zhang, and W. Yin, “An Efficient TVL1 Algorithm for Deblurring Multichannel Images Corrupted by Impulsive Noise,” SIAM J. Sci. Comput. 31(4), 2842–2865 (2009).

[CrossRef]

H. Gao and H. K. Zhao, “A fast forward solver of radiative transfer equation,” Transp. Theory Stat. Phys. 38(3), 149–192 (2009).

[CrossRef]

P. Zhao and B. Yu, “On model selection consistency of Lasso,” J. Mach. Learn. Res. 7, 2541–2563 (2006).

G. Wang, X. Qian, W. Cong, H. Shen, Y. Li, W. Han, K. Durairaj, M. Jiang, T. Zhou, J. Cheng, J. Tian, Y. Lv, H. Li, and J. Luo, “Recent development in bioluminescence tomography,” Current Medical Imaging Reviews 2(4), 453–457 (2006).

[CrossRef]

C. Kuo, O. Coquoz, T. Troy, D. Zwarg, and B. Rice, “Bioluminescent tomography for in vivo localization and quantification of luminescent sources from a multiple-view imaging system,” Mol. Imaging 4, 370 (2005).

P. Stefanov and G. Uhlmann, “An inverse source problem in optical molecular imaging,” Analysis and PDE 1, 115–126 (2008).

[CrossRef]

Z. Tao, N. J. McCormick, and R. Sanchez, “Ocean source and optical property estimation from explicit and implicit algorithms,” Appl. Opt. 33(15), 3265 (1994).

[CrossRef]
[PubMed]

S. Osher, Y. Mao, B. Dong, and W. Yin, “Fast linearized Bregman iteration for compressed sensing and sparse denoising,” Commun. Math. Sci. (to be published).

E. J. Candes, J. Romberg, and T. Tao, “Stable signal recovery from incomplete and inaccurate measurements,” Commun. Pure Appl. Math. 59(8), 1207–1223 (2006).

[CrossRef]

G. Wang, X. Qian, W. Cong, H. Shen, Y. Li, W. Han, K. Durairaj, M. Jiang, T. Zhou, J. Cheng, J. Tian, Y. Lv, H. Li, and J. Luo, “Recent development in bioluminescence tomography,” Current Medical Imaging Reviews 2(4), 453–457 (2006).

[CrossRef]

S. J. Kim, K. Koh, M. Lustig, S. Boyd, and D. Gorinevsky, “An Interior-Point Method for Large-Scale l1-Regularized Least Squares,” IEEE J. Sel. Top. Signal Process. 1(4), 606–617 (2007).

[CrossRef]

E. J. Candes and M. B. Wakin, “A introduction to compressive sampling,” IEEE Signal Process. Mag. 25(2), 21–30 (2008).

[CrossRef]

D. Donoho, “Compresse sensing,” IEEE Trans. Inf. Theory 52(4), 1289–1306 (2006).

[CrossRef]

E. J. Candes, J. Romberg, and T. Tao, “Robust uncertainty principles: exact signal reconstruction from highly incomplete frequency information,” IEEE Trans. Inf. Theory 52(2), 489–509 (2006).

[CrossRef]

E. J. Candes and T. Tao, “Decoding by linear programming,” IEEE Trans. Inf. Theory 51(12), 4203–4215 (2005).

[CrossRef]

E. J. Candes and T. Tao, “Near optimal signal recovery from random projections: universal encoding strategies,” IEEE Trans. Inf. Theory 52(12), 5406–5425 (2006).

[CrossRef]

K. D. Paulsen, P. M. Meaney, M. J. Moskowitz, and J. R. Sullivan, “A dual mesh scheme for finite element based reconstruction algorithms,” IEEE Trans. Med. Imaging 14(3), 504–514 (1995).

[CrossRef]
[PubMed]

G. Wang, H. Shen, K. Durairaj, X. Qian, and W. Cong, “The first bioluminescence tomography system for simultaneous acquisition of multi-view and multi-spectral data,” Int. J. Biomed. Imaging 2006, 1–8 (2006).

[CrossRef]

Y. Lv, J. Tian, W. Cong, and G. Wang, “Experimental study on bioluminescence tomography with multimodality fusion,” Int. J. Biomed. Imaging 2007, 86741 (2007).

[CrossRef]

V. Markel and J. Schotland, “Fourier-laplace structure of the linearized inverse scattering problem for the radiative transport equation,” Inv. Prob. Imag. 1, 181–189 (2007).

[CrossRef]

A. N. Panchenko, “Inverse source problem of radiative transfer: a special case of the attenuated Radon transform,” Inverse Probl. 9(2), 321–337 (1993).

[CrossRef]

A. R. Arridge, “Optical tomography in medical imaging,” Inverse Probl. 15(2), R41–R93 (1999).

[CrossRef]

A. D. Klose, V. Ntziachristos, and A. H. Hielscher, “The inverse source problem based on the radiative transfer equation in optical molecular imaging,” J. Comput. Phys. 202(1), 323–345 (2005).

[CrossRef]

P. Zhao and B. Yu, “On model selection consistency of Lasso,” J. Mach. Learn. Res. 7, 2541–2563 (2006).

C. H. Contag and B. D. Ross, “It’s not just about anatomy: in vivo bioluminescence imaging as an eyepiece into biology,” J. Magn. Reson. Imaging 16(4), 378–387 (2002).

[CrossRef]
[PubMed]

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[CrossRef]

C. E. Siewert, “An inverse source problem in radiative transfer,” J. Quant. Spectrosc. Radiat. Transf. 50(6), 603–609 (1993).

[CrossRef]

R. Tibshirani, “Regression shrinkage and selection via the Lasso,” J. R. Stat. Soc., B 58, 267–288 (1996).

D. W. Marquardt, “An algorithm for least-squares estimation of nonlinear parameters,” J. Soc. Ind. Appl. Math. 11(2), 431–441 (1963).

[CrossRef]

G. Wang, Y. Li, and M. Jiang, “Uniqueness theorems in bioluminescence tomography,” Med. Phys. 31(8), 2289–2299 (2004).

[CrossRef]
[PubMed]

C. Kuo, O. Coquoz, T. Troy, D. Zwarg, and B. Rice, “Bioluminescent tomography for in vivo localization and quantification of luminescent sources from a multiple-view imaging system,” Mol. Imaging 4, 370 (2005).

N. J. McCormick, “Inverse radiative transfer problems: a review,” Nucl. Sci. Eng. 112, 185–198 (1992).

G. Wang, W. Cong, K. Durairaj, X. Qian, H. Shen, P. Sinn, E. Hoffman, G. McLennan, and M. Henry, “In vivo mouse studies with bioluminescence tomography,” Opt. Express 14(17), 7801–7809 (2006).

[CrossRef]
[PubMed]

W. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. Wang, E. Hoffman, G. McLennan, P. McCray, J. Zabner, and A. Cong, “Practical reconstruction method for bioluminescence tomography,” Opt. Express 13(18), 6756–6771 (2005).

[CrossRef]
[PubMed]

X. Gu, Q. Zhang, L. Larcom, and H. Jiang, “Three-dimensional bioluminescence tomography with model-based reconstruction,” Opt. Express 12(17), 3996–4000 (2004).

[CrossRef]
[PubMed]

Y. Lv, J. Tian, W. X. Cong, G. Wang, J. Luo, W. Yang, H. Li, and H. Li, “A multilevel adaptive finite element algorithm for bioluminescence tomography,” Opt. Express 14(18), 8211–8223 (2006).

[CrossRef]
[PubMed]

Y. Lu, X. Zhang, A. Douraghy, D. Stout, J. Tian, T. F. Chan, and A. F. Chatziioannou, “Source reconstruction for spectrally-resolved bioluminescence tomography with sparse a priori information,” Opt. Express 17(10), 8062–8080 (2009).

[CrossRef]
[PubMed]

M. Boffety, M. Allain, A. Sentenac, M. Massonneau, and R. Carminati, “Analysis of the depth resolution limit of luminescence diffuse optical imaging,” Opt. Lett. 33(20), 2290–2292 (2008).

[CrossRef]
[PubMed]

H. Dehghani, S. C. Davis, S. Jiang, B. W. Pogue, K. D. Paulsen, and M. S. Patterson, “Spectrally resolved bioluminescence optical tomography,” Opt. Lett. 31(3), 365–367 (2006).

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