H. Gao and H. K. Zhao, “A fast forward solver of radiative transfer equation,” Transp. Theory Stat. Phys. 38(3), 149–192 (2009).

[CrossRef]

T. Goldstein and S. Osher, “The split bregman method for l1 regularized problems,” SIAM J. Imaging Sci. 2(2), 323–343 (2009).

[CrossRef]

J. Yang, Y. Zhang, and W. Yin, “An Efficient TVL1 Algorithm for Deblurring Multichannel Images Corrupted by Impulsive Noise,” SIAM J. Sci. Comput. 31(4), 2842–2865 (2009).

[CrossRef]

Y. Lu, X. Zhang, A. Douraghy, D. Stout, J. Tian, T. F. Chan, and A. F. Chatziioannou, “Source reconstruction for spectrally-resolved bioluminescence tomography with sparse a priori information,” Opt. Express 17(10), 8062–8080 (2009).

[CrossRef]
[PubMed]

M. Boffety, M. Allain, A. Sentenac, M. Massonneau, and R. Carminati, “Analysis of the depth resolution limit of luminescence diffuse optical imaging,” Opt. Lett. 33(20), 2290–2292 (2008).

[CrossRef]
[PubMed]

W. Yin, S. Osher, D. Goldfarb, and J. Darbon, “Bregman iterative algorithms for l1-minimization with applications to compressed sensing,” SIAM J. Imaging Sciences 1(1), 143–168 (2008).

[CrossRef]

P. Stefanov and G. Uhlmann, “An inverse source problem in optical molecular imaging,” Analysis and PDE 1, 115–126 (2008).

[CrossRef]

E. J. Candes and M. B. Wakin, “A introduction to compressive sampling,” IEEE Signal Process. Mag. 25(2), 21–30 (2008).

[CrossRef]

A. Charette, J. Boulanger, and H. K. Kim, “An overview on recent radiation transport algorithm development for optical tomography imaging,” J. Quant. Spectrosc. Radiat. Transf. 109(17-18), 2743–2766 (2008).

[CrossRef]

V. Markel and J. Schotland, “Fourier-laplace structure of the linearized inverse scattering problem for the radiative transport equation,” Inv. Prob. Imag. 1, 181–189 (2007).

[CrossRef]

Y. Lv, J. Tian, W. Cong, and G. Wang, “Experimental study on bioluminescence tomography with multimodality fusion,” Int. J. Biomed. Imaging 2007, 86741 (2007).

[CrossRef]

G. Bal and A. Tamasan, “Inverse source problems in transport equations,” SIAM J. Math. Anal. 39(1), 57–76 (2007).

[CrossRef]

S. J. Kim, K. Koh, M. Lustig, S. Boyd, and D. Gorinevsky, “An Interior-Point Method for Large-Scale l1-Regularized Least Squares,” IEEE J. Sel. Top. Signal Process. 1(4), 606–617 (2007).

[CrossRef]

M. Xu and L. V. Wang, “Photoacoustic imaging in biomedicine,” Rev. Sci. Instrum. 77, 041101–1-041101–22 (2006).

[CrossRef]

G. Wang, X. Qian, W. Cong, H. Shen, Y. Li, W. Han, K. Durairaj, M. Jiang, T. Zhou, J. Cheng, J. Tian, Y. Lv, H. Li, and J. Luo, “Recent development in bioluminescence tomography,” Current Medical Imaging Reviews 2(4), 453–457 (2006).

[CrossRef]

G. Wang, H. Shen, K. Durairaj, X. Qian, and W. Cong, “The first bioluminescence tomography system for simultaneous acquisition of multi-view and multi-spectral data,” Int. J. Biomed. Imaging 2006, 1–8 (2006).

[CrossRef]

E. J. Candes and T. Tao, “Near optimal signal recovery from random projections: universal encoding strategies,” IEEE Trans. Inf. Theory 52(12), 5406–5425 (2006).

[CrossRef]

P. Zhao and B. Yu, “On model selection consistency of Lasso,” J. Mach. Learn. Res. 7, 2541–2563 (2006).

D. Donoho, “Compresse sensing,” IEEE Trans. Inf. Theory 52(4), 1289–1306 (2006).

[CrossRef]

E. J. Candes, J. Romberg, and T. Tao, “Robust uncertainty principles: exact signal reconstruction from highly incomplete frequency information,” IEEE Trans. Inf. Theory 52(2), 489–509 (2006).

[CrossRef]

E. J. Candes, J. Romberg, and T. Tao, “Stable signal recovery from incomplete and inaccurate measurements,” Commun. Pure Appl. Math. 59(8), 1207–1223 (2006).

[CrossRef]

H. Dehghani, S. C. Davis, S. Jiang, B. W. Pogue, K. D. Paulsen, and M. S. Patterson, “Spectrally resolved bioluminescence optical tomography,” Opt. Lett. 31(3), 365–367 (2006).

[CrossRef]
[PubMed]

G. Wang, W. Cong, K. Durairaj, X. Qian, H. Shen, P. Sinn, E. Hoffman, G. McLennan, and M. Henry, “In vivo mouse studies with bioluminescence tomography,” Opt. Express 14(17), 7801–7809 (2006).

[CrossRef]
[PubMed]

Y. Lv, J. Tian, W. X. Cong, G. Wang, J. Luo, W. Yang, H. Li, and H. Li, “A multilevel adaptive finite element algorithm for bioluminescence tomography,” Opt. Express 14(18), 8211–8223 (2006).

[CrossRef]
[PubMed]

W. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. Wang, E. Hoffman, G. McLennan, P. McCray, J. Zabner, and A. Cong, “Practical reconstruction method for bioluminescence tomography,” Opt. Express 13(18), 6756–6771 (2005).

[CrossRef]
[PubMed]

E. J. Candes and T. Tao, “Decoding by linear programming,” IEEE Trans. Inf. Theory 51(12), 4203–4215 (2005).

[CrossRef]

C. Kuo, O. Coquoz, T. Troy, D. Zwarg, and B. Rice, “Bioluminescent tomography for in vivo localization and quantification of luminescent sources from a multiple-view imaging system,” Mol. Imaging 4, 370 (2005).

G. Alexandrakis, F. R. Rannou, and A. F. Chatziioannou, “Tomographic bioluminescence imaging by use of a combined optical-PET (OPET) system: a computer simulation feasibility study,” Phys. Med. Biol. 50(17), 4225–4241 (2005).

[CrossRef]
[PubMed]

A. D. Klose, V. Ntziachristos, and A. H. Hielscher, “The inverse source problem based on the radiative transfer equation in optical molecular imaging,” J. Comput. Phys. 202(1), 323–345 (2005).

[CrossRef]

A. J. Chaudhari, F. Darvas, J. R. Bading, R. A. Moats, P. S. Conti, D. J. Smith, S. R. Cherry, and R. M. Leahy, “Hyperspectral and multispectral bioluminescence optical tomography for small animal imaging,” Phys. Med. Biol. 50(23), 5421–5441 (2005).

[CrossRef]
[PubMed]

G. Wang, Y. Li, and M. Jiang, “Uniqueness theorems in bioluminescence tomography,” Med. Phys. 31(8), 2289–2299 (2004).

[CrossRef]
[PubMed]

X. Gu, Q. Zhang, L. Larcom, and H. Jiang, “Three-dimensional bioluminescence tomography with model-based reconstruction,” Opt. Express 12(17), 3996–4000 (2004).

[CrossRef]
[PubMed]

G. Wang, E. A. Hoffman, G. McLennan, L. V. Wang, M. Suter, and J. Meinel, “Development of the first bioluminescent CT scanner,” Radiology 229(P), 566 (2003).

C. H. Contag and B. D. Ross, “It’s not just about anatomy: in vivo bioluminescence imaging as an eyepiece into biology,” J. Magn. Reson. Imaging 16(4), 378–387 (2002).

[CrossRef]
[PubMed]

R. Weissleder and U. U. Mahmood, “Molecular imaging,” Radiology 219(2), 316–333 (2001).

[PubMed]

A. R. Arridge, “Optical tomography in medical imaging,” Inverse Probl. 15(2), R41–R93 (1999).

[CrossRef]

R. Tibshirani, “Regression shrinkage and selection via the Lasso,” J. R. Stat. Soc., B 58, 267–288 (1996).

K. D. Paulsen, P. M. Meaney, M. J. Moskowitz, and J. R. Sullivan, “A dual mesh scheme for finite element based reconstruction algorithms,” IEEE Trans. Med. Imaging 14(3), 504–514 (1995).

[CrossRef]
[PubMed]

A. N. Panchenko, “Inverse source problem of radiative transfer: a special case of the attenuated Radon transform,” Inverse Probl. 9(2), 321–337 (1993).

[CrossRef]

C. E. Siewert, “An inverse source problem in radiative transfer,” J. Quant. Spectrosc. Radiat. Transf. 50(6), 603–609 (1993).

[CrossRef]

N. J. McCormick, “Inverse radiative transfer problems: a review,” Nucl. Sci. Eng. 112, 185–198 (1992).

D. W. Marquardt, “An algorithm for least-squares estimation of nonlinear parameters,” J. Soc. Ind. Appl. Math. 11(2), 431–441 (1963).

[CrossRef]

K. Levenberg, “A method for the solution of certain nonlinear problems in least squares,” Q. Appl. Math. 2, 164–168 (1944).

G. Alexandrakis, F. R. Rannou, and A. F. Chatziioannou, “Tomographic bioluminescence imaging by use of a combined optical-PET (OPET) system: a computer simulation feasibility study,” Phys. Med. Biol. 50(17), 4225–4241 (2005).

[CrossRef]
[PubMed]

A. R. Arridge, “Optical tomography in medical imaging,” Inverse Probl. 15(2), R41–R93 (1999).

[CrossRef]

A. J. Chaudhari, F. Darvas, J. R. Bading, R. A. Moats, P. S. Conti, D. J. Smith, S. R. Cherry, and R. M. Leahy, “Hyperspectral and multispectral bioluminescence optical tomography for small animal imaging,” Phys. Med. Biol. 50(23), 5421–5441 (2005).

[CrossRef]
[PubMed]

G. Bal and A. Tamasan, “Inverse source problems in transport equations,” SIAM J. Math. Anal. 39(1), 57–76 (2007).

[CrossRef]

A. Charette, J. Boulanger, and H. K. Kim, “An overview on recent radiation transport algorithm development for optical tomography imaging,” J. Quant. Spectrosc. Radiat. Transf. 109(17-18), 2743–2766 (2008).

[CrossRef]

S. J. Kim, K. Koh, M. Lustig, S. Boyd, and D. Gorinevsky, “An Interior-Point Method for Large-Scale l1-Regularized Least Squares,” IEEE J. Sel. Top. Signal Process. 1(4), 606–617 (2007).

[CrossRef]

E. J. Candes and M. B. Wakin, “A introduction to compressive sampling,” IEEE Signal Process. Mag. 25(2), 21–30 (2008).

[CrossRef]

E. J. Candes, J. Romberg, and T. Tao, “Robust uncertainty principles: exact signal reconstruction from highly incomplete frequency information,” IEEE Trans. Inf. Theory 52(2), 489–509 (2006).

[CrossRef]

E. J. Candes, J. Romberg, and T. Tao, “Stable signal recovery from incomplete and inaccurate measurements,” Commun. Pure Appl. Math. 59(8), 1207–1223 (2006).

[CrossRef]

E. J. Candes and T. Tao, “Near optimal signal recovery from random projections: universal encoding strategies,” IEEE Trans. Inf. Theory 52(12), 5406–5425 (2006).

[CrossRef]

E. J. Candes and T. Tao, “Decoding by linear programming,” IEEE Trans. Inf. Theory 51(12), 4203–4215 (2005).

[CrossRef]

A. Charette, J. Boulanger, and H. K. Kim, “An overview on recent radiation transport algorithm development for optical tomography imaging,” J. Quant. Spectrosc. Radiat. Transf. 109(17-18), 2743–2766 (2008).

[CrossRef]

Y. Lu, X. Zhang, A. Douraghy, D. Stout, J. Tian, T. F. Chan, and A. F. Chatziioannou, “Source reconstruction for spectrally-resolved bioluminescence tomography with sparse a priori information,” Opt. Express 17(10), 8062–8080 (2009).

[CrossRef]
[PubMed]

G. Alexandrakis, F. R. Rannou, and A. F. Chatziioannou, “Tomographic bioluminescence imaging by use of a combined optical-PET (OPET) system: a computer simulation feasibility study,” Phys. Med. Biol. 50(17), 4225–4241 (2005).

[CrossRef]
[PubMed]

A. J. Chaudhari, F. Darvas, J. R. Bading, R. A. Moats, P. S. Conti, D. J. Smith, S. R. Cherry, and R. M. Leahy, “Hyperspectral and multispectral bioluminescence optical tomography for small animal imaging,” Phys. Med. Biol. 50(23), 5421–5441 (2005).

[CrossRef]
[PubMed]

G. Wang, X. Qian, W. Cong, H. Shen, Y. Li, W. Han, K. Durairaj, M. Jiang, T. Zhou, J. Cheng, J. Tian, Y. Lv, H. Li, and J. Luo, “Recent development in bioluminescence tomography,” Current Medical Imaging Reviews 2(4), 453–457 (2006).

[CrossRef]

A. J. Chaudhari, F. Darvas, J. R. Bading, R. A. Moats, P. S. Conti, D. J. Smith, S. R. Cherry, and R. M. Leahy, “Hyperspectral and multispectral bioluminescence optical tomography for small animal imaging,” Phys. Med. Biol. 50(23), 5421–5441 (2005).

[CrossRef]
[PubMed]

W. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. Wang, E. Hoffman, G. McLennan, P. McCray, J. Zabner, and A. Cong, “Practical reconstruction method for bioluminescence tomography,” Opt. Express 13(18), 6756–6771 (2005).

[CrossRef]
[PubMed]

Y. Lv, J. Tian, W. Cong, and G. Wang, “Experimental study on bioluminescence tomography with multimodality fusion,” Int. J. Biomed. Imaging 2007, 86741 (2007).

[CrossRef]

G. Wang, H. Shen, K. Durairaj, X. Qian, and W. Cong, “The first bioluminescence tomography system for simultaneous acquisition of multi-view and multi-spectral data,” Int. J. Biomed. Imaging 2006, 1–8 (2006).

[CrossRef]

G. Wang, X. Qian, W. Cong, H. Shen, Y. Li, W. Han, K. Durairaj, M. Jiang, T. Zhou, J. Cheng, J. Tian, Y. Lv, H. Li, and J. Luo, “Recent development in bioluminescence tomography,” Current Medical Imaging Reviews 2(4), 453–457 (2006).

[CrossRef]

G. Wang, W. Cong, K. Durairaj, X. Qian, H. Shen, P. Sinn, E. Hoffman, G. McLennan, and M. Henry, “In vivo mouse studies with bioluminescence tomography,” Opt. Express 14(17), 7801–7809 (2006).

[CrossRef]
[PubMed]

W. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. Wang, E. Hoffman, G. McLennan, P. McCray, J. Zabner, and A. Cong, “Practical reconstruction method for bioluminescence tomography,” Opt. Express 13(18), 6756–6771 (2005).

[CrossRef]
[PubMed]

Y. Lv, J. Tian, W. X. Cong, G. Wang, J. Luo, W. Yang, H. Li, and H. Li, “A multilevel adaptive finite element algorithm for bioluminescence tomography,” Opt. Express 14(18), 8211–8223 (2006).

[CrossRef]
[PubMed]

C. H. Contag and B. D. Ross, “It’s not just about anatomy: in vivo bioluminescence imaging as an eyepiece into biology,” J. Magn. Reson. Imaging 16(4), 378–387 (2002).

[CrossRef]
[PubMed]

A. J. Chaudhari, F. Darvas, J. R. Bading, R. A. Moats, P. S. Conti, D. J. Smith, S. R. Cherry, and R. M. Leahy, “Hyperspectral and multispectral bioluminescence optical tomography for small animal imaging,” Phys. Med. Biol. 50(23), 5421–5441 (2005).

[CrossRef]
[PubMed]

C. Kuo, O. Coquoz, T. Troy, D. Zwarg, and B. Rice, “Bioluminescent tomography for in vivo localization and quantification of luminescent sources from a multiple-view imaging system,” Mol. Imaging 4, 370 (2005).

W. Yin, S. Osher, D. Goldfarb, and J. Darbon, “Bregman iterative algorithms for l1-minimization with applications to compressed sensing,” SIAM J. Imaging Sciences 1(1), 143–168 (2008).

[CrossRef]

A. J. Chaudhari, F. Darvas, J. R. Bading, R. A. Moats, P. S. Conti, D. J. Smith, S. R. Cherry, and R. M. Leahy, “Hyperspectral and multispectral bioluminescence optical tomography for small animal imaging,” Phys. Med. Biol. 50(23), 5421–5441 (2005).

[CrossRef]
[PubMed]

S. Osher, Y. Mao, B. Dong, and W. Yin, “Fast linearized Bregman iteration for compressed sensing and sparse denoising,” Commun. Math. Sci. (to be published).

D. Donoho, “Compresse sensing,” IEEE Trans. Inf. Theory 52(4), 1289–1306 (2006).

[CrossRef]

G. Wang, H. Shen, K. Durairaj, X. Qian, and W. Cong, “The first bioluminescence tomography system for simultaneous acquisition of multi-view and multi-spectral data,” Int. J. Biomed. Imaging 2006, 1–8 (2006).

[CrossRef]

G. Wang, X. Qian, W. Cong, H. Shen, Y. Li, W. Han, K. Durairaj, M. Jiang, T. Zhou, J. Cheng, J. Tian, Y. Lv, H. Li, and J. Luo, “Recent development in bioluminescence tomography,” Current Medical Imaging Reviews 2(4), 453–457 (2006).

[CrossRef]

G. Wang, W. Cong, K. Durairaj, X. Qian, H. Shen, P. Sinn, E. Hoffman, G. McLennan, and M. Henry, “In vivo mouse studies with bioluminescence tomography,” Opt. Express 14(17), 7801–7809 (2006).

[CrossRef]
[PubMed]

H. Gao and H. K. Zhao, “A fast forward solver of radiative transfer equation,” Transp. Theory Stat. Phys. 38(3), 149–192 (2009).

[CrossRef]

W. Yin, S. Osher, D. Goldfarb, and J. Darbon, “Bregman iterative algorithms for l1-minimization with applications to compressed sensing,” SIAM J. Imaging Sciences 1(1), 143–168 (2008).

[CrossRef]

T. Goldstein and S. Osher, “The split bregman method for l1 regularized problems,” SIAM J. Imaging Sci. 2(2), 323–343 (2009).

[CrossRef]

S. J. Kim, K. Koh, M. Lustig, S. Boyd, and D. Gorinevsky, “An Interior-Point Method for Large-Scale l1-Regularized Least Squares,” IEEE J. Sel. Top. Signal Process. 1(4), 606–617 (2007).

[CrossRef]

G. Wang, X. Qian, W. Cong, H. Shen, Y. Li, W. Han, K. Durairaj, M. Jiang, T. Zhou, J. Cheng, J. Tian, Y. Lv, H. Li, and J. Luo, “Recent development in bioluminescence tomography,” Current Medical Imaging Reviews 2(4), 453–457 (2006).

[CrossRef]

G. Wang, W. Cong, K. Durairaj, X. Qian, H. Shen, P. Sinn, E. Hoffman, G. McLennan, and M. Henry, “In vivo mouse studies with bioluminescence tomography,” Opt. Express 14(17), 7801–7809 (2006).

[CrossRef]
[PubMed]

A. D. Klose, V. Ntziachristos, and A. H. Hielscher, “The inverse source problem based on the radiative transfer equation in optical molecular imaging,” J. Comput. Phys. 202(1), 323–345 (2005).

[CrossRef]

G. Wang, W. Cong, K. Durairaj, X. Qian, H. Shen, P. Sinn, E. Hoffman, G. McLennan, and M. Henry, “In vivo mouse studies with bioluminescence tomography,” Opt. Express 14(17), 7801–7809 (2006).

[CrossRef]
[PubMed]

W. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. Wang, E. Hoffman, G. McLennan, P. McCray, J. Zabner, and A. Cong, “Practical reconstruction method for bioluminescence tomography,” Opt. Express 13(18), 6756–6771 (2005).

[CrossRef]
[PubMed]

G. Wang, E. A. Hoffman, G. McLennan, L. V. Wang, M. Suter, and J. Meinel, “Development of the first bioluminescent CT scanner,” Radiology 229(P), 566 (2003).

G. Wang, X. Qian, W. Cong, H. Shen, Y. Li, W. Han, K. Durairaj, M. Jiang, T. Zhou, J. Cheng, J. Tian, Y. Lv, H. Li, and J. Luo, “Recent development in bioluminescence tomography,” Current Medical Imaging Reviews 2(4), 453–457 (2006).

[CrossRef]

W. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. Wang, E. Hoffman, G. McLennan, P. McCray, J. Zabner, and A. Cong, “Practical reconstruction method for bioluminescence tomography,” Opt. Express 13(18), 6756–6771 (2005).

[CrossRef]
[PubMed]

G. Wang, Y. Li, and M. Jiang, “Uniqueness theorems in bioluminescence tomography,” Med. Phys. 31(8), 2289–2299 (2004).

[CrossRef]
[PubMed]

A. Charette, J. Boulanger, and H. K. Kim, “An overview on recent radiation transport algorithm development for optical tomography imaging,” J. Quant. Spectrosc. Radiat. Transf. 109(17-18), 2743–2766 (2008).

[CrossRef]

S. J. Kim, K. Koh, M. Lustig, S. Boyd, and D. Gorinevsky, “An Interior-Point Method for Large-Scale l1-Regularized Least Squares,” IEEE J. Sel. Top. Signal Process. 1(4), 606–617 (2007).

[CrossRef]

A. D. Klose, V. Ntziachristos, and A. H. Hielscher, “The inverse source problem based on the radiative transfer equation in optical molecular imaging,” J. Comput. Phys. 202(1), 323–345 (2005).

[CrossRef]

S. J. Kim, K. Koh, M. Lustig, S. Boyd, and D. Gorinevsky, “An Interior-Point Method for Large-Scale l1-Regularized Least Squares,” IEEE J. Sel. Top. Signal Process. 1(4), 606–617 (2007).

[CrossRef]

W. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. Wang, E. Hoffman, G. McLennan, P. McCray, J. Zabner, and A. Cong, “Practical reconstruction method for bioluminescence tomography,” Opt. Express 13(18), 6756–6771 (2005).

[CrossRef]
[PubMed]

C. Kuo, O. Coquoz, T. Troy, D. Zwarg, and B. Rice, “Bioluminescent tomography for in vivo localization and quantification of luminescent sources from a multiple-view imaging system,” Mol. Imaging 4, 370 (2005).

A. J. Chaudhari, F. Darvas, J. R. Bading, R. A. Moats, P. S. Conti, D. J. Smith, S. R. Cherry, and R. M. Leahy, “Hyperspectral and multispectral bioluminescence optical tomography for small animal imaging,” Phys. Med. Biol. 50(23), 5421–5441 (2005).

[CrossRef]
[PubMed]

K. Levenberg, “A method for the solution of certain nonlinear problems in least squares,” Q. Appl. Math. 2, 164–168 (1944).

G. Wang, X. Qian, W. Cong, H. Shen, Y. Li, W. Han, K. Durairaj, M. Jiang, T. Zhou, J. Cheng, J. Tian, Y. Lv, H. Li, and J. Luo, “Recent development in bioluminescence tomography,” Current Medical Imaging Reviews 2(4), 453–457 (2006).

[CrossRef]

Y. Lv, J. Tian, W. X. Cong, G. Wang, J. Luo, W. Yang, H. Li, and H. Li, “A multilevel adaptive finite element algorithm for bioluminescence tomography,” Opt. Express 14(18), 8211–8223 (2006).

[CrossRef]
[PubMed]

Y. Lv, J. Tian, W. X. Cong, G. Wang, J. Luo, W. Yang, H. Li, and H. Li, “A multilevel adaptive finite element algorithm for bioluminescence tomography,” Opt. Express 14(18), 8211–8223 (2006).

[CrossRef]
[PubMed]

G. Wang, X. Qian, W. Cong, H. Shen, Y. Li, W. Han, K. Durairaj, M. Jiang, T. Zhou, J. Cheng, J. Tian, Y. Lv, H. Li, and J. Luo, “Recent development in bioluminescence tomography,” Current Medical Imaging Reviews 2(4), 453–457 (2006).

[CrossRef]

G. Wang, Y. Li, and M. Jiang, “Uniqueness theorems in bioluminescence tomography,” Med. Phys. 31(8), 2289–2299 (2004).

[CrossRef]
[PubMed]

W. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. Wang, E. Hoffman, G. McLennan, P. McCray, J. Zabner, and A. Cong, “Practical reconstruction method for bioluminescence tomography,” Opt. Express 13(18), 6756–6771 (2005).

[CrossRef]
[PubMed]

Y. Lv, J. Tian, W. X. Cong, G. Wang, J. Luo, W. Yang, H. Li, and H. Li, “A multilevel adaptive finite element algorithm for bioluminescence tomography,” Opt. Express 14(18), 8211–8223 (2006).

[CrossRef]
[PubMed]

G. Wang, X. Qian, W. Cong, H. Shen, Y. Li, W. Han, K. Durairaj, M. Jiang, T. Zhou, J. Cheng, J. Tian, Y. Lv, H. Li, and J. Luo, “Recent development in bioluminescence tomography,” Current Medical Imaging Reviews 2(4), 453–457 (2006).

[CrossRef]

S. J. Kim, K. Koh, M. Lustig, S. Boyd, and D. Gorinevsky, “An Interior-Point Method for Large-Scale l1-Regularized Least Squares,” IEEE J. Sel. Top. Signal Process. 1(4), 606–617 (2007).

[CrossRef]

Y. Lv, J. Tian, W. Cong, and G. Wang, “Experimental study on bioluminescence tomography with multimodality fusion,” Int. J. Biomed. Imaging 2007, 86741 (2007).

[CrossRef]

G. Wang, X. Qian, W. Cong, H. Shen, Y. Li, W. Han, K. Durairaj, M. Jiang, T. Zhou, J. Cheng, J. Tian, Y. Lv, H. Li, and J. Luo, “Recent development in bioluminescence tomography,” Current Medical Imaging Reviews 2(4), 453–457 (2006).

[CrossRef]

Y. Lv, J. Tian, W. X. Cong, G. Wang, J. Luo, W. Yang, H. Li, and H. Li, “A multilevel adaptive finite element algorithm for bioluminescence tomography,” Opt. Express 14(18), 8211–8223 (2006).

[CrossRef]
[PubMed]

R. Weissleder and U. U. Mahmood, “Molecular imaging,” Radiology 219(2), 316–333 (2001).

[PubMed]

S. Osher, Y. Mao, B. Dong, and W. Yin, “Fast linearized Bregman iteration for compressed sensing and sparse denoising,” Commun. Math. Sci. (to be published).

V. Markel and J. Schotland, “Fourier-laplace structure of the linearized inverse scattering problem for the radiative transport equation,” Inv. Prob. Imag. 1, 181–189 (2007).

[CrossRef]

D. W. Marquardt, “An algorithm for least-squares estimation of nonlinear parameters,” J. Soc. Ind. Appl. Math. 11(2), 431–441 (1963).

[CrossRef]

W. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. Wang, E. Hoffman, G. McLennan, P. McCray, J. Zabner, and A. Cong, “Practical reconstruction method for bioluminescence tomography,” Opt. Express 13(18), 6756–6771 (2005).

[CrossRef]
[PubMed]

G. Wang, W. Cong, K. Durairaj, X. Qian, H. Shen, P. Sinn, E. Hoffman, G. McLennan, and M. Henry, “In vivo mouse studies with bioluminescence tomography,” Opt. Express 14(17), 7801–7809 (2006).

[CrossRef]
[PubMed]

W. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. Wang, E. Hoffman, G. McLennan, P. McCray, J. Zabner, and A. Cong, “Practical reconstruction method for bioluminescence tomography,” Opt. Express 13(18), 6756–6771 (2005).

[CrossRef]
[PubMed]

G. Wang, E. A. Hoffman, G. McLennan, L. V. Wang, M. Suter, and J. Meinel, “Development of the first bioluminescent CT scanner,” Radiology 229(P), 566 (2003).

K. D. Paulsen, P. M. Meaney, M. J. Moskowitz, and J. R. Sullivan, “A dual mesh scheme for finite element based reconstruction algorithms,” IEEE Trans. Med. Imaging 14(3), 504–514 (1995).

[CrossRef]
[PubMed]

G. Wang, E. A. Hoffman, G. McLennan, L. V. Wang, M. Suter, and J. Meinel, “Development of the first bioluminescent CT scanner,” Radiology 229(P), 566 (2003).

A. J. Chaudhari, F. Darvas, J. R. Bading, R. A. Moats, P. S. Conti, D. J. Smith, S. R. Cherry, and R. M. Leahy, “Hyperspectral and multispectral bioluminescence optical tomography for small animal imaging,” Phys. Med. Biol. 50(23), 5421–5441 (2005).

[CrossRef]
[PubMed]

K. D. Paulsen, P. M. Meaney, M. J. Moskowitz, and J. R. Sullivan, “A dual mesh scheme for finite element based reconstruction algorithms,” IEEE Trans. Med. Imaging 14(3), 504–514 (1995).

[CrossRef]
[PubMed]

A. D. Klose, V. Ntziachristos, and A. H. Hielscher, “The inverse source problem based on the radiative transfer equation in optical molecular imaging,” J. Comput. Phys. 202(1), 323–345 (2005).

[CrossRef]

T. Goldstein and S. Osher, “The split bregman method for l1 regularized problems,” SIAM J. Imaging Sci. 2(2), 323–343 (2009).

[CrossRef]

W. Yin, S. Osher, D. Goldfarb, and J. Darbon, “Bregman iterative algorithms for l1-minimization with applications to compressed sensing,” SIAM J. Imaging Sciences 1(1), 143–168 (2008).

[CrossRef]

S. Osher, Y. Mao, B. Dong, and W. Yin, “Fast linearized Bregman iteration for compressed sensing and sparse denoising,” Commun. Math. Sci. (to be published).

A. N. Panchenko, “Inverse source problem of radiative transfer: a special case of the attenuated Radon transform,” Inverse Probl. 9(2), 321–337 (1993).

[CrossRef]

H. Dehghani, S. C. Davis, S. Jiang, B. W. Pogue, K. D. Paulsen, and M. S. Patterson, “Spectrally resolved bioluminescence optical tomography,” Opt. Lett. 31(3), 365–367 (2006).

[CrossRef]
[PubMed]

K. D. Paulsen, P. M. Meaney, M. J. Moskowitz, and J. R. Sullivan, “A dual mesh scheme for finite element based reconstruction algorithms,” IEEE Trans. Med. Imaging 14(3), 504–514 (1995).

[CrossRef]
[PubMed]

G. Wang, W. Cong, K. Durairaj, X. Qian, H. Shen, P. Sinn, E. Hoffman, G. McLennan, and M. Henry, “In vivo mouse studies with bioluminescence tomography,” Opt. Express 14(17), 7801–7809 (2006).

[CrossRef]
[PubMed]

G. Wang, X. Qian, W. Cong, H. Shen, Y. Li, W. Han, K. Durairaj, M. Jiang, T. Zhou, J. Cheng, J. Tian, Y. Lv, H. Li, and J. Luo, “Recent development in bioluminescence tomography,” Current Medical Imaging Reviews 2(4), 453–457 (2006).

[CrossRef]

G. Wang, H. Shen, K. Durairaj, X. Qian, and W. Cong, “The first bioluminescence tomography system for simultaneous acquisition of multi-view and multi-spectral data,” Int. J. Biomed. Imaging 2006, 1–8 (2006).

[CrossRef]

G. Alexandrakis, F. R. Rannou, and A. F. Chatziioannou, “Tomographic bioluminescence imaging by use of a combined optical-PET (OPET) system: a computer simulation feasibility study,” Phys. Med. Biol. 50(17), 4225–4241 (2005).

[CrossRef]
[PubMed]

C. Kuo, O. Coquoz, T. Troy, D. Zwarg, and B. Rice, “Bioluminescent tomography for in vivo localization and quantification of luminescent sources from a multiple-view imaging system,” Mol. Imaging 4, 370 (2005).

E. J. Candes, J. Romberg, and T. Tao, “Stable signal recovery from incomplete and inaccurate measurements,” Commun. Pure Appl. Math. 59(8), 1207–1223 (2006).

[CrossRef]

E. J. Candes, J. Romberg, and T. Tao, “Robust uncertainty principles: exact signal reconstruction from highly incomplete frequency information,” IEEE Trans. Inf. Theory 52(2), 489–509 (2006).

[CrossRef]

C. H. Contag and B. D. Ross, “It’s not just about anatomy: in vivo bioluminescence imaging as an eyepiece into biology,” J. Magn. Reson. Imaging 16(4), 378–387 (2002).

[CrossRef]
[PubMed]

V. Markel and J. Schotland, “Fourier-laplace structure of the linearized inverse scattering problem for the radiative transport equation,” Inv. Prob. Imag. 1, 181–189 (2007).

[CrossRef]

G. Wang, X. Qian, W. Cong, H. Shen, Y. Li, W. Han, K. Durairaj, M. Jiang, T. Zhou, J. Cheng, J. Tian, Y. Lv, H. Li, and J. Luo, “Recent development in bioluminescence tomography,” Current Medical Imaging Reviews 2(4), 453–457 (2006).

[CrossRef]

G. Wang, H. Shen, K. Durairaj, X. Qian, and W. Cong, “The first bioluminescence tomography system for simultaneous acquisition of multi-view and multi-spectral data,” Int. J. Biomed. Imaging 2006, 1–8 (2006).

[CrossRef]

G. Wang, W. Cong, K. Durairaj, X. Qian, H. Shen, P. Sinn, E. Hoffman, G. McLennan, and M. Henry, “In vivo mouse studies with bioluminescence tomography,” Opt. Express 14(17), 7801–7809 (2006).

[CrossRef]
[PubMed]

C. E. Siewert, “An inverse source problem in radiative transfer,” J. Quant. Spectrosc. Radiat. Transf. 50(6), 603–609 (1993).

[CrossRef]

G. Wang, W. Cong, K. Durairaj, X. Qian, H. Shen, P. Sinn, E. Hoffman, G. McLennan, and M. Henry, “In vivo mouse studies with bioluminescence tomography,” Opt. Express 14(17), 7801–7809 (2006).

[CrossRef]
[PubMed]

A. J. Chaudhari, F. Darvas, J. R. Bading, R. A. Moats, P. S. Conti, D. J. Smith, S. R. Cherry, and R. M. Leahy, “Hyperspectral and multispectral bioluminescence optical tomography for small animal imaging,” Phys. Med. Biol. 50(23), 5421–5441 (2005).

[CrossRef]
[PubMed]

P. Stefanov and G. Uhlmann, “An inverse source problem in optical molecular imaging,” Analysis and PDE 1, 115–126 (2008).

[CrossRef]

K. D. Paulsen, P. M. Meaney, M. J. Moskowitz, and J. R. Sullivan, “A dual mesh scheme for finite element based reconstruction algorithms,” IEEE Trans. Med. Imaging 14(3), 504–514 (1995).

[CrossRef]
[PubMed]

G. Wang, E. A. Hoffman, G. McLennan, L. V. Wang, M. Suter, and J. Meinel, “Development of the first bioluminescent CT scanner,” Radiology 229(P), 566 (2003).

G. Bal and A. Tamasan, “Inverse source problems in transport equations,” SIAM J. Math. Anal. 39(1), 57–76 (2007).

[CrossRef]

E. J. Candes, J. Romberg, and T. Tao, “Robust uncertainty principles: exact signal reconstruction from highly incomplete frequency information,” IEEE Trans. Inf. Theory 52(2), 489–509 (2006).

[CrossRef]

E. J. Candes, J. Romberg, and T. Tao, “Stable signal recovery from incomplete and inaccurate measurements,” Commun. Pure Appl. Math. 59(8), 1207–1223 (2006).

[CrossRef]

E. J. Candes and T. Tao, “Near optimal signal recovery from random projections: universal encoding strategies,” IEEE Trans. Inf. Theory 52(12), 5406–5425 (2006).

[CrossRef]

E. J. Candes and T. Tao, “Decoding by linear programming,” IEEE Trans. Inf. Theory 51(12), 4203–4215 (2005).

[CrossRef]

Y. Lu, X. Zhang, A. Douraghy, D. Stout, J. Tian, T. F. Chan, and A. F. Chatziioannou, “Source reconstruction for spectrally-resolved bioluminescence tomography with sparse a priori information,” Opt. Express 17(10), 8062–8080 (2009).

[CrossRef]
[PubMed]

Y. Lv, J. Tian, W. Cong, and G. Wang, “Experimental study on bioluminescence tomography with multimodality fusion,” Int. J. Biomed. Imaging 2007, 86741 (2007).

[CrossRef]

G. Wang, X. Qian, W. Cong, H. Shen, Y. Li, W. Han, K. Durairaj, M. Jiang, T. Zhou, J. Cheng, J. Tian, Y. Lv, H. Li, and J. Luo, “Recent development in bioluminescence tomography,” Current Medical Imaging Reviews 2(4), 453–457 (2006).

[CrossRef]

Y. Lv, J. Tian, W. X. Cong, G. Wang, J. Luo, W. Yang, H. Li, and H. Li, “A multilevel adaptive finite element algorithm for bioluminescence tomography,” Opt. Express 14(18), 8211–8223 (2006).

[CrossRef]
[PubMed]

R. Tibshirani, “Regression shrinkage and selection via the Lasso,” J. R. Stat. Soc., B 58, 267–288 (1996).

C. Kuo, O. Coquoz, T. Troy, D. Zwarg, and B. Rice, “Bioluminescent tomography for in vivo localization and quantification of luminescent sources from a multiple-view imaging system,” Mol. Imaging 4, 370 (2005).

P. Stefanov and G. Uhlmann, “An inverse source problem in optical molecular imaging,” Analysis and PDE 1, 115–126 (2008).

[CrossRef]

E. J. Candes and M. B. Wakin, “A introduction to compressive sampling,” IEEE Signal Process. Mag. 25(2), 21–30 (2008).

[CrossRef]

Y. Lv, J. Tian, W. Cong, and G. Wang, “Experimental study on bioluminescence tomography with multimodality fusion,” Int. J. Biomed. Imaging 2007, 86741 (2007).

[CrossRef]

G. Wang, H. Shen, K. Durairaj, X. Qian, and W. Cong, “The first bioluminescence tomography system for simultaneous acquisition of multi-view and multi-spectral data,” Int. J. Biomed. Imaging 2006, 1–8 (2006).

[CrossRef]

G. Wang, X. Qian, W. Cong, H. Shen, Y. Li, W. Han, K. Durairaj, M. Jiang, T. Zhou, J. Cheng, J. Tian, Y. Lv, H. Li, and J. Luo, “Recent development in bioluminescence tomography,” Current Medical Imaging Reviews 2(4), 453–457 (2006).

[CrossRef]

G. Wang, W. Cong, K. Durairaj, X. Qian, H. Shen, P. Sinn, E. Hoffman, G. McLennan, and M. Henry, “In vivo mouse studies with bioluminescence tomography,” Opt. Express 14(17), 7801–7809 (2006).

[CrossRef]
[PubMed]

Y. Lv, J. Tian, W. X. Cong, G. Wang, J. Luo, W. Yang, H. Li, and H. Li, “A multilevel adaptive finite element algorithm for bioluminescence tomography,” Opt. Express 14(18), 8211–8223 (2006).

[CrossRef]
[PubMed]

W. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. Wang, E. Hoffman, G. McLennan, P. McCray, J. Zabner, and A. Cong, “Practical reconstruction method for bioluminescence tomography,” Opt. Express 13(18), 6756–6771 (2005).

[CrossRef]
[PubMed]

G. Wang, Y. Li, and M. Jiang, “Uniqueness theorems in bioluminescence tomography,” Med. Phys. 31(8), 2289–2299 (2004).

[CrossRef]
[PubMed]

G. Wang, E. A. Hoffman, G. McLennan, L. V. Wang, M. Suter, and J. Meinel, “Development of the first bioluminescent CT scanner,” Radiology 229(P), 566 (2003).

W. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. Wang, E. Hoffman, G. McLennan, P. McCray, J. Zabner, and A. Cong, “Practical reconstruction method for bioluminescence tomography,” Opt. Express 13(18), 6756–6771 (2005).

[CrossRef]
[PubMed]

M. Xu and L. V. Wang, “Photoacoustic imaging in biomedicine,” Rev. Sci. Instrum. 77, 041101–1-041101–22 (2006).

[CrossRef]

G. Wang, E. A. Hoffman, G. McLennan, L. V. Wang, M. Suter, and J. Meinel, “Development of the first bioluminescent CT scanner,” Radiology 229(P), 566 (2003).

R. Weissleder and U. U. Mahmood, “Molecular imaging,” Radiology 219(2), 316–333 (2001).

[PubMed]

M. Xu and L. V. Wang, “Photoacoustic imaging in biomedicine,” Rev. Sci. Instrum. 77, 041101–1-041101–22 (2006).

[CrossRef]

J. Yang, Y. Zhang, and W. Yin, “An Efficient TVL1 Algorithm for Deblurring Multichannel Images Corrupted by Impulsive Noise,” SIAM J. Sci. Comput. 31(4), 2842–2865 (2009).

[CrossRef]

Y. Lv, J. Tian, W. X. Cong, G. Wang, J. Luo, W. Yang, H. Li, and H. Li, “A multilevel adaptive finite element algorithm for bioluminescence tomography,” Opt. Express 14(18), 8211–8223 (2006).

[CrossRef]
[PubMed]

J. Yang, Y. Zhang, and W. Yin, “An Efficient TVL1 Algorithm for Deblurring Multichannel Images Corrupted by Impulsive Noise,” SIAM J. Sci. Comput. 31(4), 2842–2865 (2009).

[CrossRef]

W. Yin, S. Osher, D. Goldfarb, and J. Darbon, “Bregman iterative algorithms for l1-minimization with applications to compressed sensing,” SIAM J. Imaging Sciences 1(1), 143–168 (2008).

[CrossRef]

S. Osher, Y. Mao, B. Dong, and W. Yin, “Fast linearized Bregman iteration for compressed sensing and sparse denoising,” Commun. Math. Sci. (to be published).

P. Zhao and B. Yu, “On model selection consistency of Lasso,” J. Mach. Learn. Res. 7, 2541–2563 (2006).

W. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. Wang, E. Hoffman, G. McLennan, P. McCray, J. Zabner, and A. Cong, “Practical reconstruction method for bioluminescence tomography,” Opt. Express 13(18), 6756–6771 (2005).

[CrossRef]
[PubMed]

J. Yang, Y. Zhang, and W. Yin, “An Efficient TVL1 Algorithm for Deblurring Multichannel Images Corrupted by Impulsive Noise,” SIAM J. Sci. Comput. 31(4), 2842–2865 (2009).

[CrossRef]

H. Gao and H. K. Zhao, “A fast forward solver of radiative transfer equation,” Transp. Theory Stat. Phys. 38(3), 149–192 (2009).

[CrossRef]

P. Zhao and B. Yu, “On model selection consistency of Lasso,” J. Mach. Learn. Res. 7, 2541–2563 (2006).

G. Wang, X. Qian, W. Cong, H. Shen, Y. Li, W. Han, K. Durairaj, M. Jiang, T. Zhou, J. Cheng, J. Tian, Y. Lv, H. Li, and J. Luo, “Recent development in bioluminescence tomography,” Current Medical Imaging Reviews 2(4), 453–457 (2006).

[CrossRef]

C. Kuo, O. Coquoz, T. Troy, D. Zwarg, and B. Rice, “Bioluminescent tomography for in vivo localization and quantification of luminescent sources from a multiple-view imaging system,” Mol. Imaging 4, 370 (2005).

P. Stefanov and G. Uhlmann, “An inverse source problem in optical molecular imaging,” Analysis and PDE 1, 115–126 (2008).

[CrossRef]

S. Osher, Y. Mao, B. Dong, and W. Yin, “Fast linearized Bregman iteration for compressed sensing and sparse denoising,” Commun. Math. Sci. (to be published).

E. J. Candes, J. Romberg, and T. Tao, “Stable signal recovery from incomplete and inaccurate measurements,” Commun. Pure Appl. Math. 59(8), 1207–1223 (2006).

[CrossRef]

G. Wang, X. Qian, W. Cong, H. Shen, Y. Li, W. Han, K. Durairaj, M. Jiang, T. Zhou, J. Cheng, J. Tian, Y. Lv, H. Li, and J. Luo, “Recent development in bioluminescence tomography,” Current Medical Imaging Reviews 2(4), 453–457 (2006).

[CrossRef]

S. J. Kim, K. Koh, M. Lustig, S. Boyd, and D. Gorinevsky, “An Interior-Point Method for Large-Scale l1-Regularized Least Squares,” IEEE J. Sel. Top. Signal Process. 1(4), 606–617 (2007).

[CrossRef]

E. J. Candes and M. B. Wakin, “A introduction to compressive sampling,” IEEE Signal Process. Mag. 25(2), 21–30 (2008).

[CrossRef]

E. J. Candes, J. Romberg, and T. Tao, “Robust uncertainty principles: exact signal reconstruction from highly incomplete frequency information,” IEEE Trans. Inf. Theory 52(2), 489–509 (2006).

[CrossRef]

E. J. Candes and T. Tao, “Decoding by linear programming,” IEEE Trans. Inf. Theory 51(12), 4203–4215 (2005).

[CrossRef]

E. J. Candes and T. Tao, “Near optimal signal recovery from random projections: universal encoding strategies,” IEEE Trans. Inf. Theory 52(12), 5406–5425 (2006).

[CrossRef]

D. Donoho, “Compresse sensing,” IEEE Trans. Inf. Theory 52(4), 1289–1306 (2006).

[CrossRef]

K. D. Paulsen, P. M. Meaney, M. J. Moskowitz, and J. R. Sullivan, “A dual mesh scheme for finite element based reconstruction algorithms,” IEEE Trans. Med. Imaging 14(3), 504–514 (1995).

[CrossRef]
[PubMed]

G. Wang, H. Shen, K. Durairaj, X. Qian, and W. Cong, “The first bioluminescence tomography system for simultaneous acquisition of multi-view and multi-spectral data,” Int. J. Biomed. Imaging 2006, 1–8 (2006).

[CrossRef]

Y. Lv, J. Tian, W. Cong, and G. Wang, “Experimental study on bioluminescence tomography with multimodality fusion,” Int. J. Biomed. Imaging 2007, 86741 (2007).

[CrossRef]

V. Markel and J. Schotland, “Fourier-laplace structure of the linearized inverse scattering problem for the radiative transport equation,” Inv. Prob. Imag. 1, 181–189 (2007).

[CrossRef]

A. R. Arridge, “Optical tomography in medical imaging,” Inverse Probl. 15(2), R41–R93 (1999).

[CrossRef]

A. N. Panchenko, “Inverse source problem of radiative transfer: a special case of the attenuated Radon transform,” Inverse Probl. 9(2), 321–337 (1993).

[CrossRef]

A. D. Klose, V. Ntziachristos, and A. H. Hielscher, “The inverse source problem based on the radiative transfer equation in optical molecular imaging,” J. Comput. Phys. 202(1), 323–345 (2005).

[CrossRef]

P. Zhao and B. Yu, “On model selection consistency of Lasso,” J. Mach. Learn. Res. 7, 2541–2563 (2006).

C. H. Contag and B. D. Ross, “It’s not just about anatomy: in vivo bioluminescence imaging as an eyepiece into biology,” J. Magn. Reson. Imaging 16(4), 378–387 (2002).

[CrossRef]
[PubMed]

C. E. Siewert, “An inverse source problem in radiative transfer,” J. Quant. Spectrosc. Radiat. Transf. 50(6), 603–609 (1993).

[CrossRef]

A. Charette, J. Boulanger, and H. K. Kim, “An overview on recent radiation transport algorithm development for optical tomography imaging,” J. Quant. Spectrosc. Radiat. Transf. 109(17-18), 2743–2766 (2008).

[CrossRef]

R. Tibshirani, “Regression shrinkage and selection via the Lasso,” J. R. Stat. Soc., B 58, 267–288 (1996).

D. W. Marquardt, “An algorithm for least-squares estimation of nonlinear parameters,” J. Soc. Ind. Appl. Math. 11(2), 431–441 (1963).

[CrossRef]

G. Wang, Y. Li, and M. Jiang, “Uniqueness theorems in bioluminescence tomography,” Med. Phys. 31(8), 2289–2299 (2004).

[CrossRef]
[PubMed]

C. Kuo, O. Coquoz, T. Troy, D. Zwarg, and B. Rice, “Bioluminescent tomography for in vivo localization and quantification of luminescent sources from a multiple-view imaging system,” Mol. Imaging 4, 370 (2005).

N. J. McCormick, “Inverse radiative transfer problems: a review,” Nucl. Sci. Eng. 112, 185–198 (1992).

W. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. Wang, E. Hoffman, G. McLennan, P. McCray, J. Zabner, and A. Cong, “Practical reconstruction method for bioluminescence tomography,” Opt. Express 13(18), 6756–6771 (2005).

[CrossRef]
[PubMed]

G. Wang, W. Cong, K. Durairaj, X. Qian, H. Shen, P. Sinn, E. Hoffman, G. McLennan, and M. Henry, “In vivo mouse studies with bioluminescence tomography,” Opt. Express 14(17), 7801–7809 (2006).

[CrossRef]
[PubMed]

Y. Lv, J. Tian, W. X. Cong, G. Wang, J. Luo, W. Yang, H. Li, and H. Li, “A multilevel adaptive finite element algorithm for bioluminescence tomography,” Opt. Express 14(18), 8211–8223 (2006).

[CrossRef]
[PubMed]

X. Gu, Q. Zhang, L. Larcom, and H. Jiang, “Three-dimensional bioluminescence tomography with model-based reconstruction,” Opt. Express 12(17), 3996–4000 (2004).

[CrossRef]
[PubMed]

Y. Lu, X. Zhang, A. Douraghy, D. Stout, J. Tian, T. F. Chan, and A. F. Chatziioannou, “Source reconstruction for spectrally-resolved bioluminescence tomography with sparse a priori information,” Opt. Express 17(10), 8062–8080 (2009).

[CrossRef]
[PubMed]

H. Dehghani, S. C. Davis, S. Jiang, B. W. Pogue, K. D. Paulsen, and M. S. Patterson, “Spectrally resolved bioluminescence optical tomography,” Opt. Lett. 31(3), 365–367 (2006).

[CrossRef]
[PubMed]

M. Boffety, M. Allain, A. Sentenac, M. Massonneau, and R. Carminati, “Analysis of the depth resolution limit of luminescence diffuse optical imaging,” Opt. Lett. 33(20), 2290–2292 (2008).

[CrossRef]
[PubMed]

A. J. Chaudhari, F. Darvas, J. R. Bading, R. A. Moats, P. S. Conti, D. J. Smith, S. R. Cherry, and R. M. Leahy, “Hyperspectral and multispectral bioluminescence optical tomography for small animal imaging,” Phys. Med. Biol. 50(23), 5421–5441 (2005).

[CrossRef]
[PubMed]

G. Alexandrakis, F. R. Rannou, and A. F. Chatziioannou, “Tomographic bioluminescence imaging by use of a combined optical-PET (OPET) system: a computer simulation feasibility study,” Phys. Med. Biol. 50(17), 4225–4241 (2005).

[CrossRef]
[PubMed]

K. Levenberg, “A method for the solution of certain nonlinear problems in least squares,” Q. Appl. Math. 2, 164–168 (1944).

G. Wang, E. A. Hoffman, G. McLennan, L. V. Wang, M. Suter, and J. Meinel, “Development of the first bioluminescent CT scanner,” Radiology 229(P), 566 (2003).

R. Weissleder and U. U. Mahmood, “Molecular imaging,” Radiology 219(2), 316–333 (2001).

[PubMed]

M. Xu and L. V. Wang, “Photoacoustic imaging in biomedicine,” Rev. Sci. Instrum. 77, 041101–1-041101–22 (2006).

[CrossRef]

T. Goldstein and S. Osher, “The split bregman method for l1 regularized problems,” SIAM J. Imaging Sci. 2(2), 323–343 (2009).

[CrossRef]

W. Yin, S. Osher, D. Goldfarb, and J. Darbon, “Bregman iterative algorithms for l1-minimization with applications to compressed sensing,” SIAM J. Imaging Sciences 1(1), 143–168 (2008).

[CrossRef]

G. Bal and A. Tamasan, “Inverse source problems in transport equations,” SIAM J. Math. Anal. 39(1), 57–76 (2007).

[CrossRef]

J. Yang, Y. Zhang, and W. Yin, “An Efficient TVL1 Algorithm for Deblurring Multichannel Images Corrupted by Impulsive Noise,” SIAM J. Sci. Comput. 31(4), 2842–2865 (2009).

[CrossRef]

H. Gao and H. K. Zhao, “A fast forward solver of radiative transfer equation,” Transp. Theory Stat. Phys. 38(3), 149–192 (2009).

[CrossRef]

H. Gao, and H. Zhao, “A multilevel and multigrid optical tomography based on radiative transfer equation,” in Proceedings of SPIE (Munich, Germany, 2009), pp. 73690E–1-73690E–10.

A. Ishimaru, Wave Propagation and Scattering in Random Media (Academic Press, 1978).

Y. Zhang, “Theory of compressive sensing via l1-minimization: a non-RIP analysis and extensions,” Rice University CAAM Technical Report TR08–11, (2008).

E. E. Lewis, and W. F. Miller, Computational Methods of Neutron Transport (Wiley, 1984).

E. Esser, X. Zhang, and T. Chan, “A general framework for a class of first order primal-dual algorithms for TV minimization,” UCLA CAM Report 09–67, (2009).

K. Madsen, H. B. Nielsen, and O. Tingleff, Methods for Non-linear Least Squares Problems (Technical University of Denmark, 1999).

S. J. Kim, K. Koh, M. Lustig, and S. Boyd, “An efficient method for compressed sensing,” IEEE International Conference on Image Processing 3, 117–120 (2007).

S. Chandrasekhar, Radiative Transfer (Dover Publications, 1960).

J. Demmel, Applied Numerical Linear Algebra (Cambidge Univ. Press, 1997).

Z. Wen, W. Yin, D. Goldfarb, and Y. Zhang, “A fast algorithm for sparse reconstruction based on shrinkage, subspace optimization and continuation,” Rice University CAAM Technical Report TR09–01, (2009).

S. Boyd, and L. Vandenberghe, Convex Optimization (Cambridge university press, 2004).

K. M. Case, and P. F. P. F. Zweifel, Linear Transport Theory (Addison-Wesley Educational Publishers Inc., 1967).