Abstract

A method is proposed for the two-dimensional depiction of a holographic image of the volume of a medium with particles, reconstructed from a digital hologram. Such a depiction is intended for simultaneous observation in a single plane and efficient processing of the holographic images of all the particles of the volume, which lie at various distances from the plane in which the hologram is recorded. Possibilities and techniques are considered for automatically processing such a two-dimensional depiction in order to increase the focusing accuracy of the holographic image of each particle and to take into account the possible overlap of the images of particles that have similar transverse coordinates, as well as in order to obtain information on the spatial location of the particles in the volume and concerning their distributions in size, over the layers of the volume, over orientations, and over the other parameters.

© 2013 Optical Society of America

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  1. V. V.  Dyomin, A. S.  Ol’shukov, E. Yu.  Naumova, N. G.  Mel’nik, “Digital holography of plankton,” Opt. Atmos. Okeana 21, 1089 (2008).
  2. N.  Burns, J.  Watson, “A study of focus metrics and their application to automated focusing of inline transmission holograms,” J. Imaging Sci. 58, No. 2, 90 (2011).
  3. V. V.  Dyomin, A. S.  Kozlova, “Methods of determining the coordinates of particles from their digital holographic images,” Izv. Vyssh. Uchebn. Zaved. Fiz. 53, No. 9/3, 35 (2010).
  4. A.  Santos, C.  Ortiz de Solorzano, J. J.  Vaquera, J. M.  Pena, N.  Malpica, F.  del Pozo, “Evaluation of autofocus functions in molecular cytogenetic analysis,” J. Microsc. 188, 264 (1997).
    [CrossRef]
  5. V. V.  Dyomin, D. V.  Kamenev, “Quality criteria of holographic images of particles of various shapes,” Izv. Vyssh. Uchebn. Zaved. Fiz. 53, No. 9, 46 (2010).
  6. V. V.  Dyomin, D. V.  Kamenev, “Image-quality criteria in the digital holography of particles,” Opt. Zh. 79, No. 4, 17 (2012) [J. Opt. Technol. 79, 208 (2012)].
  7. V. V.  Dyomin, D. V.  Kamenev, “Comparison the techniques of finding a best focusing plane of particle image reconstructed from digital hologram,” in EOS Annual Meeting 2012, Aberdeen, Scotland, UK, 25–28 Sept.2012, vol. 7.
  8. V. V.  Dyomin, A. S.  Olshukov, D. V.  Kamenev, “Evaluation of the plankton species coordinates from digital holographic video,” in Proc. Oceans ’11, Santander, Spain, 6–9 June2011, paper 110131-015.
  9. V. A.  So?fer, Methods of Computerized Image Processing (Mir, Moscow, 2003).
  10. V. V.  Dyomin, D. V.  Kamenev, “Two-dimensional representation of digital holographic image of the volume of a medium with particles as a method of depicting and processing information concerning the particles,” in Collection of the Papers of the Seventh International Conference on Fundamental Problems of Optics–2012, St. Petersburg, October, 15–19 2012, V. G.  Bespalov, S. A.  Kozlov, eds. (NIU ITMO, St. Petersburg, 2012), pp. 391–393.
  11. D. V.  Kamenev, “Developing and putting into practice the method of forming a two-dimensional image of a volume with particles, restored from a digital hologram,” in Materials of the Youth Competition–Conference on Photonics and Optical Technology, Novosibirsk, 2012, pp. 15–16.
  12. D. I.  Stasel’ko, V. A.  Kosnikovski?, “Holographic recording of spatial ensembles of rapidly moving particles,” Opt. Spektrosk. 34, 365 (1973).
  13. J.  Watson, N.  Burns, “Advances in submersible digital holography,” in EOS Annual Meeting 2012, Aberdeen, Scotland, UK, 25–28 Sept.2012, vol. 7.
  14. V. V.  Dyomin, A. S.  Ol’shukov, E. V.  Dzyuba, “Digital holographic video for studying the dynamics of plankton,” Izv. Vyssh. Uchebn. Zaved. Fiz. 53, No. 8, 81 (2010).

2012

V. V.  Dyomin, D. V.  Kamenev, “Image-quality criteria in the digital holography of particles,” Opt. Zh. 79, No. 4, 17 (2012) [J. Opt. Technol. 79, 208 (2012)].

2011

N.  Burns, J.  Watson, “A study of focus metrics and their application to automated focusing of inline transmission holograms,” J. Imaging Sci. 58, No. 2, 90 (2011).

2010

V. V.  Dyomin, A. S.  Kozlova, “Methods of determining the coordinates of particles from their digital holographic images,” Izv. Vyssh. Uchebn. Zaved. Fiz. 53, No. 9/3, 35 (2010).

V. V.  Dyomin, D. V.  Kamenev, “Quality criteria of holographic images of particles of various shapes,” Izv. Vyssh. Uchebn. Zaved. Fiz. 53, No. 9, 46 (2010).

V. V.  Dyomin, A. S.  Ol’shukov, E. V.  Dzyuba, “Digital holographic video for studying the dynamics of plankton,” Izv. Vyssh. Uchebn. Zaved. Fiz. 53, No. 8, 81 (2010).

2008

V. V.  Dyomin, A. S.  Ol’shukov, E. Yu.  Naumova, N. G.  Mel’nik, “Digital holography of plankton,” Opt. Atmos. Okeana 21, 1089 (2008).

1997

A.  Santos, C.  Ortiz de Solorzano, J. J.  Vaquera, J. M.  Pena, N.  Malpica, F.  del Pozo, “Evaluation of autofocus functions in molecular cytogenetic analysis,” J. Microsc. 188, 264 (1997).
[CrossRef]

1973

D. I.  Stasel’ko, V. A.  Kosnikovski?, “Holographic recording of spatial ensembles of rapidly moving particles,” Opt. Spektrosk. 34, 365 (1973).

Burns, N.

N.  Burns, J.  Watson, “A study of focus metrics and their application to automated focusing of inline transmission holograms,” J. Imaging Sci. 58, No. 2, 90 (2011).

J.  Watson, N.  Burns, “Advances in submersible digital holography,” in EOS Annual Meeting 2012, Aberdeen, Scotland, UK, 25–28 Sept.2012, vol. 7.

del Pozo, F.

A.  Santos, C.  Ortiz de Solorzano, J. J.  Vaquera, J. M.  Pena, N.  Malpica, F.  del Pozo, “Evaluation of autofocus functions in molecular cytogenetic analysis,” J. Microsc. 188, 264 (1997).
[CrossRef]

Dyomin, V. V.

V. V.  Dyomin, D. V.  Kamenev, “Image-quality criteria in the digital holography of particles,” Opt. Zh. 79, No. 4, 17 (2012) [J. Opt. Technol. 79, 208 (2012)].

V. V.  Dyomin, D. V.  Kamenev, “Quality criteria of holographic images of particles of various shapes,” Izv. Vyssh. Uchebn. Zaved. Fiz. 53, No. 9, 46 (2010).

V. V.  Dyomin, A. S.  Ol’shukov, E. V.  Dzyuba, “Digital holographic video for studying the dynamics of plankton,” Izv. Vyssh. Uchebn. Zaved. Fiz. 53, No. 8, 81 (2010).

V. V.  Dyomin, A. S.  Kozlova, “Methods of determining the coordinates of particles from their digital holographic images,” Izv. Vyssh. Uchebn. Zaved. Fiz. 53, No. 9/3, 35 (2010).

V. V.  Dyomin, A. S.  Ol’shukov, E. Yu.  Naumova, N. G.  Mel’nik, “Digital holography of plankton,” Opt. Atmos. Okeana 21, 1089 (2008).

V. V.  Dyomin, D. V.  Kamenev, “Comparison the techniques of finding a best focusing plane of particle image reconstructed from digital hologram,” in EOS Annual Meeting 2012, Aberdeen, Scotland, UK, 25–28 Sept.2012, vol. 7.

V. V.  Dyomin, A. S.  Olshukov, D. V.  Kamenev, “Evaluation of the plankton species coordinates from digital holographic video,” in Proc. Oceans ’11, Santander, Spain, 6–9 June2011, paper 110131-015.

V. V.  Dyomin, D. V.  Kamenev, “Two-dimensional representation of digital holographic image of the volume of a medium with particles as a method of depicting and processing information concerning the particles,” in Collection of the Papers of the Seventh International Conference on Fundamental Problems of Optics–2012, St. Petersburg, October, 15–19 2012, V. G.  Bespalov, S. A.  Kozlov, eds. (NIU ITMO, St. Petersburg, 2012), pp. 391–393.

Dzyuba, E. V.

V. V.  Dyomin, A. S.  Ol’shukov, E. V.  Dzyuba, “Digital holographic video for studying the dynamics of plankton,” Izv. Vyssh. Uchebn. Zaved. Fiz. 53, No. 8, 81 (2010).

Kamenev, D. V.

V. V.  Dyomin, D. V.  Kamenev, “Image-quality criteria in the digital holography of particles,” Opt. Zh. 79, No. 4, 17 (2012) [J. Opt. Technol. 79, 208 (2012)].

V. V.  Dyomin, D. V.  Kamenev, “Quality criteria of holographic images of particles of various shapes,” Izv. Vyssh. Uchebn. Zaved. Fiz. 53, No. 9, 46 (2010).

V. V.  Dyomin, D. V.  Kamenev, “Comparison the techniques of finding a best focusing plane of particle image reconstructed from digital hologram,” in EOS Annual Meeting 2012, Aberdeen, Scotland, UK, 25–28 Sept.2012, vol. 7.

V. V.  Dyomin, A. S.  Olshukov, D. V.  Kamenev, “Evaluation of the plankton species coordinates from digital holographic video,” in Proc. Oceans ’11, Santander, Spain, 6–9 June2011, paper 110131-015.

D. V.  Kamenev, “Developing and putting into practice the method of forming a two-dimensional image of a volume with particles, restored from a digital hologram,” in Materials of the Youth Competition–Conference on Photonics and Optical Technology, Novosibirsk, 2012, pp. 15–16.

V. V.  Dyomin, D. V.  Kamenev, “Two-dimensional representation of digital holographic image of the volume of a medium with particles as a method of depicting and processing information concerning the particles,” in Collection of the Papers of the Seventh International Conference on Fundamental Problems of Optics–2012, St. Petersburg, October, 15–19 2012, V. G.  Bespalov, S. A.  Kozlov, eds. (NIU ITMO, St. Petersburg, 2012), pp. 391–393.

Kosnikovskii, V. A.

D. I.  Stasel’ko, V. A.  Kosnikovski?, “Holographic recording of spatial ensembles of rapidly moving particles,” Opt. Spektrosk. 34, 365 (1973).

Kozlova, A. S.

V. V.  Dyomin, A. S.  Kozlova, “Methods of determining the coordinates of particles from their digital holographic images,” Izv. Vyssh. Uchebn. Zaved. Fiz. 53, No. 9/3, 35 (2010).

Malpica, N.

A.  Santos, C.  Ortiz de Solorzano, J. J.  Vaquera, J. M.  Pena, N.  Malpica, F.  del Pozo, “Evaluation of autofocus functions in molecular cytogenetic analysis,” J. Microsc. 188, 264 (1997).
[CrossRef]

Mel’nik, N. G.

V. V.  Dyomin, A. S.  Ol’shukov, E. Yu.  Naumova, N. G.  Mel’nik, “Digital holography of plankton,” Opt. Atmos. Okeana 21, 1089 (2008).

Naumova, E. Yu.

V. V.  Dyomin, A. S.  Ol’shukov, E. Yu.  Naumova, N. G.  Mel’nik, “Digital holography of plankton,” Opt. Atmos. Okeana 21, 1089 (2008).

Ol’shukov, A. S.

V. V.  Dyomin, A. S.  Ol’shukov, E. V.  Dzyuba, “Digital holographic video for studying the dynamics of plankton,” Izv. Vyssh. Uchebn. Zaved. Fiz. 53, No. 8, 81 (2010).

V. V.  Dyomin, A. S.  Ol’shukov, E. Yu.  Naumova, N. G.  Mel’nik, “Digital holography of plankton,” Opt. Atmos. Okeana 21, 1089 (2008).

Olshukov, A. S.

V. V.  Dyomin, A. S.  Olshukov, D. V.  Kamenev, “Evaluation of the plankton species coordinates from digital holographic video,” in Proc. Oceans ’11, Santander, Spain, 6–9 June2011, paper 110131-015.

Ortiz de Solorzano, C.

A.  Santos, C.  Ortiz de Solorzano, J. J.  Vaquera, J. M.  Pena, N.  Malpica, F.  del Pozo, “Evaluation of autofocus functions in molecular cytogenetic analysis,” J. Microsc. 188, 264 (1997).
[CrossRef]

Pena, J. M.

A.  Santos, C.  Ortiz de Solorzano, J. J.  Vaquera, J. M.  Pena, N.  Malpica, F.  del Pozo, “Evaluation of autofocus functions in molecular cytogenetic analysis,” J. Microsc. 188, 264 (1997).
[CrossRef]

Santos, A.

A.  Santos, C.  Ortiz de Solorzano, J. J.  Vaquera, J. M.  Pena, N.  Malpica, F.  del Pozo, “Evaluation of autofocus functions in molecular cytogenetic analysis,” J. Microsc. 188, 264 (1997).
[CrossRef]

Soifer, V. A.

V. A.  So?fer, Methods of Computerized Image Processing (Mir, Moscow, 2003).

Stasel’ko, D. I.

D. I.  Stasel’ko, V. A.  Kosnikovski?, “Holographic recording of spatial ensembles of rapidly moving particles,” Opt. Spektrosk. 34, 365 (1973).

Vaquera, J. J.

A.  Santos, C.  Ortiz de Solorzano, J. J.  Vaquera, J. M.  Pena, N.  Malpica, F.  del Pozo, “Evaluation of autofocus functions in molecular cytogenetic analysis,” J. Microsc. 188, 264 (1997).
[CrossRef]

Watson, J.

N.  Burns, J.  Watson, “A study of focus metrics and their application to automated focusing of inline transmission holograms,” J. Imaging Sci. 58, No. 2, 90 (2011).

J.  Watson, N.  Burns, “Advances in submersible digital holography,” in EOS Annual Meeting 2012, Aberdeen, Scotland, UK, 25–28 Sept.2012, vol. 7.

Izv. Vyssh. Uchebn. Zaved. Fiz.

V. V.  Dyomin, A. S.  Kozlova, “Methods of determining the coordinates of particles from their digital holographic images,” Izv. Vyssh. Uchebn. Zaved. Fiz. 53, No. 9/3, 35 (2010).

V. V.  Dyomin, D. V.  Kamenev, “Quality criteria of holographic images of particles of various shapes,” Izv. Vyssh. Uchebn. Zaved. Fiz. 53, No. 9, 46 (2010).

V. V.  Dyomin, A. S.  Ol’shukov, E. V.  Dzyuba, “Digital holographic video for studying the dynamics of plankton,” Izv. Vyssh. Uchebn. Zaved. Fiz. 53, No. 8, 81 (2010).

J. Imaging Sci.

N.  Burns, J.  Watson, “A study of focus metrics and their application to automated focusing of inline transmission holograms,” J. Imaging Sci. 58, No. 2, 90 (2011).

J. Microsc.

A.  Santos, C.  Ortiz de Solorzano, J. J.  Vaquera, J. M.  Pena, N.  Malpica, F.  del Pozo, “Evaluation of autofocus functions in molecular cytogenetic analysis,” J. Microsc. 188, 264 (1997).
[CrossRef]

Opt. Atmos. Okeana

V. V.  Dyomin, A. S.  Ol’shukov, E. Yu.  Naumova, N. G.  Mel’nik, “Digital holography of plankton,” Opt. Atmos. Okeana 21, 1089 (2008).

Opt. Spektrosk.

D. I.  Stasel’ko, V. A.  Kosnikovski?, “Holographic recording of spatial ensembles of rapidly moving particles,” Opt. Spektrosk. 34, 365 (1973).

Opt. Zh.

V. V.  Dyomin, D. V.  Kamenev, “Image-quality criteria in the digital holography of particles,” Opt. Zh. 79, No. 4, 17 (2012) [J. Opt. Technol. 79, 208 (2012)].

Other

V. V.  Dyomin, D. V.  Kamenev, “Comparison the techniques of finding a best focusing plane of particle image reconstructed from digital hologram,” in EOS Annual Meeting 2012, Aberdeen, Scotland, UK, 25–28 Sept.2012, vol. 7.

V. V.  Dyomin, A. S.  Olshukov, D. V.  Kamenev, “Evaluation of the plankton species coordinates from digital holographic video,” in Proc. Oceans ’11, Santander, Spain, 6–9 June2011, paper 110131-015.

V. A.  So?fer, Methods of Computerized Image Processing (Mir, Moscow, 2003).

V. V.  Dyomin, D. V.  Kamenev, “Two-dimensional representation of digital holographic image of the volume of a medium with particles as a method of depicting and processing information concerning the particles,” in Collection of the Papers of the Seventh International Conference on Fundamental Problems of Optics–2012, St. Petersburg, October, 15–19 2012, V. G.  Bespalov, S. A.  Kozlov, eds. (NIU ITMO, St. Petersburg, 2012), pp. 391–393.

D. V.  Kamenev, “Developing and putting into practice the method of forming a two-dimensional image of a volume with particles, restored from a digital hologram,” in Materials of the Youth Competition–Conference on Photonics and Optical Technology, Novosibirsk, 2012, pp. 15–16.

J.  Watson, N.  Burns, “Advances in submersible digital holography,” in EOS Annual Meeting 2012, Aberdeen, Scotland, UK, 25–28 Sept.2012, vol. 7.

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