T. Lasser, A. Soubret, J. Ripoll, and V. Ntziachristos, “Surface reconstruction for free-space 360° fluorescence molecular tomography and the effects of animal motion,” IEEE Trans. Med. Imaging 27, 188-194 (2008).

[CrossRef]
[PubMed]

W. Bangerth, R. Hartmann, and G. Kanschat, “Deal.II--a general-purpose object-oriented finite element library,” ACM Trans. Math. Softw. 33, 24:1-24:27 (2007).

[CrossRef]

S. C. Davis, H. Dehghani, J. Wang, S. Jiang, B. W. Pogue, and K. D. Paulsen, “Image-guided diffuse optical fluorescence tomography implemented with Laplacian-type regularization,” Opt. Express 15, 4066-4082 (2007).

[CrossRef]
[PubMed]

P. K. Yalavarthy, B. W. Pogue, H. Dehghani, and K. D. Paulsen, “Weight-matrix structured regularization provides optimal generalized least-squares estimate in diffuse optical tomography,” Med. Phys. 34, 2085-2098 (2007).

[CrossRef]
[PubMed]

M. Guven, B. Yazici, X. Intes, and B. Chance, “Diffuse optical tomography with a priori anatomical information,” Phys. Med. Biol. 50, 2837-2858 (2005).

[CrossRef]
[PubMed]

A. Soubret, J. Ripoll, and V. Ntziachristos, “Accuracy of fluorescent tomography in the presence of heterogeneities: Study of the normalized Born ratio,” IEEE Trans. Med. Imaging 24, 1377-1386 (2005).

[CrossRef]
[PubMed]

B. Brooksby, S. Jiang, C. Kogel, M. Doyley, H. Dehghani, J. Weaver, S. Poplack, B. Pogue, and K. Paulsen, “Magnetic resonance guided near infrared tomography of the breast,” Rev. Sci. Instrum. 75, 5262-5270 (2004).

[CrossRef]

V. Ntziachristos, E. A. Schellenberger, J. Ripoll, D. Yessayan, E. Graves, J. Alexi Bogdanov, L. Josephson, and R. Weissleder, “Visualization of antitumor treatment by means of fluorescence molecular tomography with an annexin V-Cy5.5 conjugate,” Proc. Natl. Acad. Sci. U.S.A. 101, 12294-12299 (2004).

[CrossRef]
[PubMed]

A. B. Milstein, J. J. Stott, S. Oh, D. A. Boas, R. P. Millane, C. A. Bouman, and K. J. Webb, “Fluorescence optical diffusion tomography using multiple-frequency data,” J. Opt. Soc. Am. A 21, 1035-1049 (2004).

[CrossRef]

V. Ntziachristos, A. G. Yodh, M. Schnall, and B. Chance, “Concurrent MRI and diffuse optical tomography of breast after indocyanine green enhancement,” Proc. Natl. Acad. Sci. U.S.A. 97, 2767-2772 (2000).

[CrossRef]
[PubMed]

R. Barbour, S. Barbour, P. Koo, H. L. Graber, R. Aronson, and J. Chang, “MRI-guided optical tomography: Prospects and computation for a new imaging method,” IEEE Comput. Sci. Eng. 2, 63-77 (1995).

[CrossRef]

C. Paige and M. Saunders, “LSQR: An algorithm for sparse linear equations and sparse least squares,” ACM Trans. Math. Softw. 8, 43-71 (1982).

[CrossRef]

V. Ntziachristos, E. A. Schellenberger, J. Ripoll, D. Yessayan, E. Graves, J. Alexi Bogdanov, L. Josephson, and R. Weissleder, “Visualization of antitumor treatment by means of fluorescence molecular tomography with an annexin V-Cy5.5 conjugate,” Proc. Natl. Acad. Sci. U.S.A. 101, 12294-12299 (2004).

[CrossRef]
[PubMed]

R. Barbour, S. Barbour, P. Koo, H. L. Graber, R. Aronson, and J. Chang, “MRI-guided optical tomography: Prospects and computation for a new imaging method,” IEEE Comput. Sci. Eng. 2, 63-77 (1995).

[CrossRef]

W. Bangerth, R. Hartmann, and G. Kanschat, “Deal.II--a general-purpose object-oriented finite element library,” ACM Trans. Math. Softw. 33, 24:1-24:27 (2007).

[CrossRef]

A. Joshi, W. Bangerth, and E. M. Sevick-Muraca, “Non-contact fluorescence optical tomography with scanning patterned illumination,” Opt. Express 14, 6516-6534 (2006).

[CrossRef]
[PubMed]

W. Bangerth, R. Hartmann, and G. Kanschat, Deal.II: A Finite Element Differential Equations Analysis Library, http://www.dealii.org.

R. Barbour, S. Barbour, P. Koo, H. L. Graber, R. Aronson, and J. Chang, “MRI-guided optical tomography: Prospects and computation for a new imaging method,” IEEE Comput. Sci. Eng. 2, 63-77 (1995).

[CrossRef]

R. Barbour, S. Barbour, P. Koo, H. L. Graber, R. Aronson, and J. Chang, “MRI-guided optical tomography: Prospects and computation for a new imaging method,” IEEE Comput. Sci. Eng. 2, 63-77 (1995).

[CrossRef]

B. Brooksby, S. Jiang, C. Kogel, M. Doyley, H. Dehghani, J. Weaver, S. Poplack, B. Pogue, and K. Paulsen, “Magnetic resonance guided near infrared tomography of the breast,” Rev. Sci. Instrum. 75, 5262-5270 (2004).

[CrossRef]

M. Guven, B. Yazici, X. Intes, and B. Chance, “Diffuse optical tomography with a priori anatomical information,” Phys. Med. Biol. 50, 2837-2858 (2005).

[CrossRef]
[PubMed]

V. Ntziachristos, A. G. Yodh, M. Schnall, and B. Chance, “Concurrent MRI and diffuse optical tomography of breast after indocyanine green enhancement,” Proc. Natl. Acad. Sci. U.S.A. 97, 2767-2772 (2000).

[CrossRef]
[PubMed]

R. Barbour, S. Barbour, P. Koo, H. L. Graber, R. Aronson, and J. Chang, “MRI-guided optical tomography: Prospects and computation for a new imaging method,” IEEE Comput. Sci. Eng. 2, 63-77 (1995).

[CrossRef]

S. C. Davis, H. Dehghani, J. Wang, S. Jiang, B. W. Pogue, and K. D. Paulsen, “Image-guided diffuse optical fluorescence tomography implemented with Laplacian-type regularization,” Opt. Express 15, 4066-4082 (2007).

[CrossRef]
[PubMed]

P. K. Yalavarthy, B. W. Pogue, H. Dehghani, and K. D. Paulsen, “Weight-matrix structured regularization provides optimal generalized least-squares estimate in diffuse optical tomography,” Med. Phys. 34, 2085-2098 (2007).

[CrossRef]
[PubMed]

B. Brooksby, S. Jiang, C. Kogel, M. Doyley, H. Dehghani, J. Weaver, S. Poplack, B. Pogue, and K. Paulsen, “Magnetic resonance guided near infrared tomography of the breast,” Rev. Sci. Instrum. 75, 5262-5270 (2004).

[CrossRef]

B. Brooksby, S. Jiang, C. Kogel, M. Doyley, H. Dehghani, J. Weaver, S. Poplack, B. Pogue, and K. Paulsen, “Magnetic resonance guided near infrared tomography of the breast,” Rev. Sci. Instrum. 75, 5262-5270 (2004).

[CrossRef]

R. Barbour, S. Barbour, P. Koo, H. L. Graber, R. Aronson, and J. Chang, “MRI-guided optical tomography: Prospects and computation for a new imaging method,” IEEE Comput. Sci. Eng. 2, 63-77 (1995).

[CrossRef]

V. Ntziachristos, E. A. Schellenberger, J. Ripoll, D. Yessayan, E. Graves, J. Alexi Bogdanov, L. Josephson, and R. Weissleder, “Visualization of antitumor treatment by means of fluorescence molecular tomography with an annexin V-Cy5.5 conjugate,” Proc. Natl. Acad. Sci. U.S.A. 101, 12294-12299 (2004).

[CrossRef]
[PubMed]

M. Guven, B. Yazici, X. Intes, and B. Chance, “Diffuse optical tomography with a priori anatomical information,” Phys. Med. Biol. 50, 2837-2858 (2005).

[CrossRef]
[PubMed]

W. Bangerth, R. Hartmann, and G. Kanschat, “Deal.II--a general-purpose object-oriented finite element library,” ACM Trans. Math. Softw. 33, 24:1-24:27 (2007).

[CrossRef]

W. Bangerth, R. Hartmann, and G. Kanschat, Deal.II: A Finite Element Differential Equations Analysis Library, http://www.dealii.org.

M. Guven, B. Yazici, X. Intes, and B. Chance, “Diffuse optical tomography with a priori anatomical information,” Phys. Med. Biol. 50, 2837-2858 (2005).

[CrossRef]
[PubMed]

S. C. Davis, H. Dehghani, J. Wang, S. Jiang, B. W. Pogue, and K. D. Paulsen, “Image-guided diffuse optical fluorescence tomography implemented with Laplacian-type regularization,” Opt. Express 15, 4066-4082 (2007).

[CrossRef]
[PubMed]

B. Brooksby, S. Jiang, C. Kogel, M. Doyley, H. Dehghani, J. Weaver, S. Poplack, B. Pogue, and K. Paulsen, “Magnetic resonance guided near infrared tomography of the breast,” Rev. Sci. Instrum. 75, 5262-5270 (2004).

[CrossRef]

V. Ntziachristos, E. A. Schellenberger, J. Ripoll, D. Yessayan, E. Graves, J. Alexi Bogdanov, L. Josephson, and R. Weissleder, “Visualization of antitumor treatment by means of fluorescence molecular tomography with an annexin V-Cy5.5 conjugate,” Proc. Natl. Acad. Sci. U.S.A. 101, 12294-12299 (2004).

[CrossRef]
[PubMed]

W. Bangerth, R. Hartmann, and G. Kanschat, “Deal.II--a general-purpose object-oriented finite element library,” ACM Trans. Math. Softw. 33, 24:1-24:27 (2007).

[CrossRef]

W. Bangerth, R. Hartmann, and G. Kanschat, Deal.II: A Finite Element Differential Equations Analysis Library, http://www.dealii.org.

B. Brooksby, S. Jiang, C. Kogel, M. Doyley, H. Dehghani, J. Weaver, S. Poplack, B. Pogue, and K. Paulsen, “Magnetic resonance guided near infrared tomography of the breast,” Rev. Sci. Instrum. 75, 5262-5270 (2004).

[CrossRef]

R. Barbour, S. Barbour, P. Koo, H. L. Graber, R. Aronson, and J. Chang, “MRI-guided optical tomography: Prospects and computation for a new imaging method,” IEEE Comput. Sci. Eng. 2, 63-77 (1995).

[CrossRef]

T. Lasser, A. Soubret, J. Ripoll, and V. Ntziachristos, “Surface reconstruction for free-space 360° fluorescence molecular tomography and the effects of animal motion,” IEEE Trans. Med. Imaging 27, 188-194 (2008).

[CrossRef]
[PubMed]

T. Lasser, A. Soubret, J. Ripoll, and V. Ntziachristos, “Surface reconstruction for free-space 360° fluorescence molecular tomography and the effects of animal motion,” IEEE Trans. Med. Imaging 27, 188-194 (2008).

[CrossRef]
[PubMed]

A. Soubret, J. Ripoll, and V. Ntziachristos, “Accuracy of fluorescent tomography in the presence of heterogeneities: Study of the normalized Born ratio,” IEEE Trans. Med. Imaging 24, 1377-1386 (2005).

[CrossRef]
[PubMed]

V. Ntziachristos, E. A. Schellenberger, J. Ripoll, D. Yessayan, E. Graves, J. Alexi Bogdanov, L. Josephson, and R. Weissleder, “Visualization of antitumor treatment by means of fluorescence molecular tomography with an annexin V-Cy5.5 conjugate,” Proc. Natl. Acad. Sci. U.S.A. 101, 12294-12299 (2004).

[CrossRef]
[PubMed]

V. Ntziachristos and R. Weissleder, “Experimental three-dimensional fluorescence reconstruction of diffuse media by use of the normalized Born approximation,” Opt. Lett. 26, 893-895 (2001).

[CrossRef]

V. Ntziachristos, A. G. Yodh, M. Schnall, and B. Chance, “Concurrent MRI and diffuse optical tomography of breast after indocyanine green enhancement,” Proc. Natl. Acad. Sci. U.S.A. 97, 2767-2772 (2000).

[CrossRef]
[PubMed]

C. Paige and M. Saunders, “LSQR: An algorithm for sparse linear equations and sparse least squares,” ACM Trans. Math. Softw. 8, 43-71 (1982).

[CrossRef]

B. Brooksby, S. Jiang, C. Kogel, M. Doyley, H. Dehghani, J. Weaver, S. Poplack, B. Pogue, and K. Paulsen, “Magnetic resonance guided near infrared tomography of the breast,” Rev. Sci. Instrum. 75, 5262-5270 (2004).

[CrossRef]

S. C. Davis, H. Dehghani, J. Wang, S. Jiang, B. W. Pogue, and K. D. Paulsen, “Image-guided diffuse optical fluorescence tomography implemented with Laplacian-type regularization,” Opt. Express 15, 4066-4082 (2007).

[CrossRef]
[PubMed]

P. K. Yalavarthy, B. W. Pogue, H. Dehghani, and K. D. Paulsen, “Weight-matrix structured regularization provides optimal generalized least-squares estimate in diffuse optical tomography,” Med. Phys. 34, 2085-2098 (2007).

[CrossRef]
[PubMed]

B. Brooksby, S. Jiang, C. Kogel, M. Doyley, H. Dehghani, J. Weaver, S. Poplack, B. Pogue, and K. Paulsen, “Magnetic resonance guided near infrared tomography of the breast,” Rev. Sci. Instrum. 75, 5262-5270 (2004).

[CrossRef]

P. K. Yalavarthy, B. W. Pogue, H. Dehghani, and K. D. Paulsen, “Weight-matrix structured regularization provides optimal generalized least-squares estimate in diffuse optical tomography,” Med. Phys. 34, 2085-2098 (2007).

[CrossRef]
[PubMed]

S. C. Davis, H. Dehghani, J. Wang, S. Jiang, B. W. Pogue, and K. D. Paulsen, “Image-guided diffuse optical fluorescence tomography implemented with Laplacian-type regularization,” Opt. Express 15, 4066-4082 (2007).

[CrossRef]
[PubMed]

B. Brooksby, S. Jiang, C. Kogel, M. Doyley, H. Dehghani, J. Weaver, S. Poplack, B. Pogue, and K. Paulsen, “Magnetic resonance guided near infrared tomography of the breast,” Rev. Sci. Instrum. 75, 5262-5270 (2004).

[CrossRef]

T. Lasser, A. Soubret, J. Ripoll, and V. Ntziachristos, “Surface reconstruction for free-space 360° fluorescence molecular tomography and the effects of animal motion,” IEEE Trans. Med. Imaging 27, 188-194 (2008).

[CrossRef]
[PubMed]

A. Soubret, J. Ripoll, and V. Ntziachristos, “Accuracy of fluorescent tomography in the presence of heterogeneities: Study of the normalized Born ratio,” IEEE Trans. Med. Imaging 24, 1377-1386 (2005).

[CrossRef]
[PubMed]

V. Ntziachristos, E. A. Schellenberger, J. Ripoll, D. Yessayan, E. Graves, J. Alexi Bogdanov, L. Josephson, and R. Weissleder, “Visualization of antitumor treatment by means of fluorescence molecular tomography with an annexin V-Cy5.5 conjugate,” Proc. Natl. Acad. Sci. U.S.A. 101, 12294-12299 (2004).

[CrossRef]
[PubMed]

C. Paige and M. Saunders, “LSQR: An algorithm for sparse linear equations and sparse least squares,” ACM Trans. Math. Softw. 8, 43-71 (1982).

[CrossRef]

V. Ntziachristos, E. A. Schellenberger, J. Ripoll, D. Yessayan, E. Graves, J. Alexi Bogdanov, L. Josephson, and R. Weissleder, “Visualization of antitumor treatment by means of fluorescence molecular tomography with an annexin V-Cy5.5 conjugate,” Proc. Natl. Acad. Sci. U.S.A. 101, 12294-12299 (2004).

[CrossRef]
[PubMed]

V. Ntziachristos, A. G. Yodh, M. Schnall, and B. Chance, “Concurrent MRI and diffuse optical tomography of breast after indocyanine green enhancement,” Proc. Natl. Acad. Sci. U.S.A. 97, 2767-2772 (2000).

[CrossRef]
[PubMed]

T. Lasser, A. Soubret, J. Ripoll, and V. Ntziachristos, “Surface reconstruction for free-space 360° fluorescence molecular tomography and the effects of animal motion,” IEEE Trans. Med. Imaging 27, 188-194 (2008).

[CrossRef]
[PubMed]

A. Soubret, J. Ripoll, and V. Ntziachristos, “Accuracy of fluorescent tomography in the presence of heterogeneities: Study of the normalized Born ratio,” IEEE Trans. Med. Imaging 24, 1377-1386 (2005).

[CrossRef]
[PubMed]

B. Brooksby, S. Jiang, C. Kogel, M. Doyley, H. Dehghani, J. Weaver, S. Poplack, B. Pogue, and K. Paulsen, “Magnetic resonance guided near infrared tomography of the breast,” Rev. Sci. Instrum. 75, 5262-5270 (2004).

[CrossRef]

V. Ntziachristos, E. A. Schellenberger, J. Ripoll, D. Yessayan, E. Graves, J. Alexi Bogdanov, L. Josephson, and R. Weissleder, “Visualization of antitumor treatment by means of fluorescence molecular tomography with an annexin V-Cy5.5 conjugate,” Proc. Natl. Acad. Sci. U.S.A. 101, 12294-12299 (2004).

[CrossRef]
[PubMed]

V. Ntziachristos and R. Weissleder, “Experimental three-dimensional fluorescence reconstruction of diffuse media by use of the normalized Born approximation,” Opt. Lett. 26, 893-895 (2001).

[CrossRef]

P. K. Yalavarthy, B. W. Pogue, H. Dehghani, and K. D. Paulsen, “Weight-matrix structured regularization provides optimal generalized least-squares estimate in diffuse optical tomography,” Med. Phys. 34, 2085-2098 (2007).

[CrossRef]
[PubMed]

M. Guven, B. Yazici, X. Intes, and B. Chance, “Diffuse optical tomography with a priori anatomical information,” Phys. Med. Biol. 50, 2837-2858 (2005).

[CrossRef]
[PubMed]

V. Ntziachristos, E. A. Schellenberger, J. Ripoll, D. Yessayan, E. Graves, J. Alexi Bogdanov, L. Josephson, and R. Weissleder, “Visualization of antitumor treatment by means of fluorescence molecular tomography with an annexin V-Cy5.5 conjugate,” Proc. Natl. Acad. Sci. U.S.A. 101, 12294-12299 (2004).

[CrossRef]
[PubMed]

V. Ntziachristos, A. G. Yodh, M. Schnall, and B. Chance, “Concurrent MRI and diffuse optical tomography of breast after indocyanine green enhancement,” Proc. Natl. Acad. Sci. U.S.A. 97, 2767-2772 (2000).

[CrossRef]
[PubMed]

W. Bangerth, R. Hartmann, and G. Kanschat, “Deal.II--a general-purpose object-oriented finite element library,” ACM Trans. Math. Softw. 33, 24:1-24:27 (2007).

[CrossRef]

C. Paige and M. Saunders, “LSQR: An algorithm for sparse linear equations and sparse least squares,” ACM Trans. Math. Softw. 8, 43-71 (1982).

[CrossRef]

R. Barbour, S. Barbour, P. Koo, H. L. Graber, R. Aronson, and J. Chang, “MRI-guided optical tomography: Prospects and computation for a new imaging method,” IEEE Comput. Sci. Eng. 2, 63-77 (1995).

[CrossRef]

A. Soubret, J. Ripoll, and V. Ntziachristos, “Accuracy of fluorescent tomography in the presence of heterogeneities: Study of the normalized Born ratio,” IEEE Trans. Med. Imaging 24, 1377-1386 (2005).

[CrossRef]
[PubMed]

T. Lasser, A. Soubret, J. Ripoll, and V. Ntziachristos, “Surface reconstruction for free-space 360° fluorescence molecular tomography and the effects of animal motion,” IEEE Trans. Med. Imaging 27, 188-194 (2008).

[CrossRef]
[PubMed]

P. K. Yalavarthy, B. W. Pogue, H. Dehghani, and K. D. Paulsen, “Weight-matrix structured regularization provides optimal generalized least-squares estimate in diffuse optical tomography,” Med. Phys. 34, 2085-2098 (2007).

[CrossRef]
[PubMed]

A. Joshi, W. Bangerth, and E. M. Sevick-Muraca, “Non-contact fluorescence optical tomography with scanning patterned illumination,” Opt. Express 14, 6516-6534 (2006).

[CrossRef]
[PubMed]

S. C. Davis, H. Dehghani, J. Wang, S. Jiang, B. W. Pogue, and K. D. Paulsen, “Image-guided diffuse optical fluorescence tomography implemented with Laplacian-type regularization,” Opt. Express 15, 4066-4082 (2007).

[CrossRef]
[PubMed]

M. Guven, B. Yazici, X. Intes, and B. Chance, “Diffuse optical tomography with a priori anatomical information,” Phys. Med. Biol. 50, 2837-2858 (2005).

[CrossRef]
[PubMed]

V. Ntziachristos, A. G. Yodh, M. Schnall, and B. Chance, “Concurrent MRI and diffuse optical tomography of breast after indocyanine green enhancement,” Proc. Natl. Acad. Sci. U.S.A. 97, 2767-2772 (2000).

[CrossRef]
[PubMed]

V. Ntziachristos, E. A. Schellenberger, J. Ripoll, D. Yessayan, E. Graves, J. Alexi Bogdanov, L. Josephson, and R. Weissleder, “Visualization of antitumor treatment by means of fluorescence molecular tomography with an annexin V-Cy5.5 conjugate,” Proc. Natl. Acad. Sci. U.S.A. 101, 12294-12299 (2004).

[CrossRef]
[PubMed]

B. Brooksby, S. Jiang, C. Kogel, M. Doyley, H. Dehghani, J. Weaver, S. Poplack, B. Pogue, and K. Paulsen, “Magnetic resonance guided near infrared tomography of the breast,” Rev. Sci. Instrum. 75, 5262-5270 (2004).

[CrossRef]

W. Bangerth, R. Hartmann, and G. Kanschat, Deal.II: A Finite Element Differential Equations Analysis Library, http://www.dealii.org.