Bioluminescence tomography with structural information estimated via statistical mouse atlas registration

Bin Zhang, Wanzhou Yin, Hao Liu, Xu Cao, and Hongkai Wang

Biomed. Opt. Express 9(8), 3544-3558 (2018)  View: HTML | PDF

Comparing the effective attenuation lengths for long wavelength in vivo imaging of the mouse brain

Mengran Wang, Chunyan Wu, David Sinefeld, Bo Li, Fei Xia, and Chris Xu

Biomed. Opt. Express 9(8), 3534-3543 (2018)  View: HTML | PDF

Real-time cancer detection with an integrated lensless fluorescence contact imager

Efthymios P. Papageorgiou, Hui Zhang, Simeon Giverts, Catherine Park, Bernhard E. Boser, and Mekhail Anwar

Biomed. Opt. Express 9(8), 3607-3623 (2018)  View: HTML | PDF

Optical alignment device for two-photon microscopy

Gregorio L. Galiñanes, Paul J. Marchand, Raphaël Turcotte, Sebastien Pellat, Na Ji, and Daniel Huber

Biomed. Opt. Express 9(8), 3624-3639 (2018)  View: HTML | PDF

High speed functional imaging with source localized multifocal two-photon microscopy

Peter Quicke, Stephanie Reynolds, Mark Neil, Thomas Knöpfel, Simon R. Schultz, and Amanda J. Foust

Biomed. Opt. Express 9(8), 3678-3693 (2018)  View: HTML | PDF  [Suppl. Mat. (1)]

Label-free classification of hepatocellular-carcinoma grading using second harmonic generation microscopy

Hongxin Lin, Liyan Lin, Guangxing Wang, Ning Zuo, Zhenlin Zhan, Shusen Xie, Gang Chen, Jianxin Chen, and Shuangmu Zhuo

Biomed. Opt. Express 9(8), 3783-3793 (2018)  View: HTML | PDF

Voltage-sensitive dye delivery through the blood brain barrier using adenosine receptor agonist regadenoson

Rebecca W. Pak, Jeeun Kang, Heather Valentine, Leslie M. Loew, Daniel L. J. Thorek, Emad M. Boctor, Dean F. Wong, and Jin U. Kang

Biomed. Opt. Express 9(8), 3915-3922 (2018)  View: HTML | PDF

Quantitative second harmonic generation microscopy for the structural characterization of capsular collagen in thyroid neoplasms

Radu Hristu, Lucian G. Eftimie, Stefan G. Stanciu, Denis E. Tranca, Bogdan Paun, Maria Sajin, and George A. Stanciu

Biomed. Opt. Express 9(8), 3923-3936 (2018)  View: HTML | PDF

RETRACTED:Quantitative two-photon microscopy imaging analysis of human skin to evaluate enhanced transdermal delivery by hybrid-type multi-lamellar nanostructure

Jinhyo Ahn, Kyeong Hu Kim, Kibaek Choe, Joo Hyuck Lim, Seung Ki Lee, Yeon Sook Kim, and Pilhan Kim

Biomed. Opt. Express 9(8), 3974-3982 (2018)  View: HTML | PDF

Video-rate all-optical ultrasound imaging

Erwin J. Alles, Sacha Noimark, Efthymios Maneas, Edward Z. Zhang, Ivan P. Parkin, Paul C. Beard, and Adrien E. Desjardins

Biomed. Opt. Express 9(8), 3481-3494 (2018)  View: HTML | PDF  [Suppl. Mat. (2)]

Spatially confined quantification of bilirubin concentrations by spectroscopic visible-light optical coherence tomography

Colin Veenstra, Wilma Petersen, Ivo M. Vellekoop, Wiendelt Steenbergen, and Nienke Bosschaart

Biomed. Opt. Express 9(8), 3581-3589 (2018)  View: HTML | PDF

Three-dimensional graph-based skin layer segmentation in optical coherence tomography images for roughness estimation

Ruchir Srivastava, Ai Ping Yow, Jun Cheng, Damon W. K. Wong, and Hong Liang Tey

Biomed. Opt. Express 9(8), 3590-3606 (2018)  View: HTML | PDF

Visible-light optical coherence tomography oximetry based on circumpapillary scan and graph-search segmentation

Brian T. Soetikno, Lisa Beckmann, Xian Zhang, Amani A. Fawzi, and Hao F. Zhang

Biomed. Opt. Express 9(8), 3640-3652 (2018)  View: HTML | PDF

Intelligent epidural needle placement using fiber-probe optical coherence tomography in a piglet model

Meng-Chun Kao, Yu-Te Wu, Mei-Yung Tsou, Wen-Chuan Kuo, and Chien-Kun Ting

Biomed. Opt. Express 9(8), 3711-3724 (2018)  View: HTML | PDF

High-speed, ultrahigh-resolution distal scanning OCT endoscopy at 800 nm for in vivo imaging of colon tumorigenesis on murine models

Jessica Mavadia-Shukla, Payam Fathi, Wenxuan Liang, Shaoguang Wu, Cynthia Sears, and Xingde Li

Biomed. Opt. Express 9(8), 3731-3739 (2018)  View: HTML | PDF

Visible light OCT-based quantitative imaging of lipofuscin in the retinal pigment epithelium with standard reference targets

Zahra Nafar, Rong Wen, and Shuliang Jiao

Biomed. Opt. Express 9(8), 3768-3782 (2018)  View: HTML | PDF

Finite-difference time-domain analysis of increased penetration depth in optical coherence tomography by wavefront shaping

Jong Uk Kim, Hyun Choi, YongKeun Park, and Jonghwa Shin

Biomed. Opt. Express 9(8), 3883-3897 (2018)  View: HTML | PDF

Enabling fast and high quality LED photoacoustic imaging: a recurrent neural networks based approach

Emran Mohammad Abu Anas, Haichong K. Zhang, Jin Kang, and Emad Boctor

Biomed. Opt. Express 9(8), 3852-3866 (2018)  View: HTML | PDF

Dual-model analysis for improving the discrimination performance of human and nonhuman blood based on Raman spectroscopy

Haiyi Bian, Peng Wang, Ning Wang, Yubing Tian, Pengli Bai, Haowen Jiang, and Jing Gao

Biomed. Opt. Express 9(8), 3512-3522 (2018)  View: HTML | PDF

Wavelet-based method for removing global physiological noise in functional near-infrared spectroscopy

Lian Duan, Ziping Zhao, Yongling Lin, Xiaoyan Wu, Yuejia Luo, and Pengfei Xu

Biomed. Opt. Express 9(8), 3805-3820 (2018)  View: HTML | PDF

Stability of gel wax based optical scattering phantoms

Charlotte J. Maughan Jones and Peter R. T. Munro

Biomed. Opt. Express 9(8), 3495-3502 (2018)  View: HTML | PDF

Hyperspectral imaging in highly scattering media by the spectral phasor approach using two filters

Alexander Dvornikov and Enrico Gratton

Biomed. Opt. Express 9(8), 3503-3511 (2018)  View: HTML | PDF

Random laser imaging of bovine pericardium under the uniaxial tensile test

Natanael Cuando-Espitia, Francisco Sánchez-Arévalo, and Juan Hernández-Cordero

Biomed. Opt. Express 9(8), 3523-3533 (2018)  View: HTML | PDF

Label-free fluorescence lifetime spectroscopy detects radiation-induced necrotic changes in live brain in real-time

Brad A. Hartl, Htet S. W. Ma, Shamira Sridharan, Katherine S. Hansen, Michael S. Kent, Fredric Gorin, Ruben C. Fragoso, and Laura Marcu

Biomed. Opt. Express 9(8), 3559-3580 (2018)  View: HTML | PDF

Novel analysis of fNIRS acquired dynamic hemoglobin concentrations: application in young children with autism spectrum disorder

Yanwei Li, Huibin Jia, and Dongchuan Yu

Biomed. Opt. Express 9(8), 3694-3710 (2018)  View: HTML | PDF

Quantitative diffuse reflectance spectroscopy of short-term changes in tumor oxygenation after radiation in a matched model of radiation resistance

Paola Monterroso Diaz, Samir V. Jenkins, Kinan Alhallak, Daria Semeniak, Robert J. Griffin, Ruud P. M. Dings, and Narasimhan Rajaram

Biomed. Opt. Express 9(8), 3794-3804 (2018)  View: HTML | PDF

Full video pulse extraction

Wenjin Wang, Albertus C. den Brinker, and Gerard de Haan

Biomed. Opt. Express 9(8), 3898-3914 (2018)  View: HTML | PDF

Wearable speckle plethysmography (SPG) for characterizing microvascular flow and resistance

Michael Ghijsen, Tyler B. Rice, Bruce Yang, Sean M. White, and Bruce J. Tromberg

Biomed. Opt. Express 9(8), 3937-3952 (2018)  View: HTML | PDF

Simultaneous retrieval of optical and geometrical parameters of multilayered turbid media via state-estimation algorithms

Héctor García, Guido Baez, and Juan Pomarico

Biomed. Opt. Express 9(8), 3953-3973 (2018)  View: HTML | PDF

Noninvasive in vivo characterization of erythrocyte motion in human retinal capillaries using high-speed adaptive optics near-confocal imaging

Boyu Gu, Xiaolin Wang, Michael D. Twa, Johnny Tam, Christopher A. Girkin, and Yuhua Zhang

Biomed. Opt. Express 9(8), 3653-3677 (2018)  View: HTML | PDF  [Suppl. Mat. (5)]

Deep learning based detection of cone photoreceptors with multimodal adaptive optics scanning light ophthalmoscope images of achromatopsia

David Cunefare, Christopher S. Langlo, Emily J. Patterson, Sarah Blau, Alfredo Dubra, Joseph Carroll, and Sina Farsiu

Biomed. Opt. Express 9(8), 3740-3756 (2018)  View: HTML | PDF

Volumetric macro- and micro-scale assessment of crystalline lens opacities in cataract patients using long-depth-range swept source optical coherence tomography

Ireneusz Grulkowski, Silvestre Manzanera, Lukasz Cwiklinski, Juan Mompeán, Alberto de Castro, Jose Maria Marin, and Pablo Artal

Biomed. Opt. Express 9(8), 3821-3833 (2018)  View: HTML | PDF  [Suppl. Mat. (3)]

System for on- and off-axis volumetric OCT imaging and ray tracing aberrometry of the crystalline lens

Marco Ruggeri, Siobhan Williams, Bianca Maceo Heilman, Yue Yao, Yu-Cherng Chang, Ashik Mohamed, N. Geetha Sravani, Heather Durkee, Cornelis Rowaan, Alex Gonzalez, Arthur Ho, Jean-Marie Parel, and Fabrice Manns

Biomed. Opt. Express 9(8), 3834-3851 (2018)  View: HTML | PDF  [Suppl. Mat. (4)]

Non-mydriatic chorioretinal imaging in a transmission geometry and application to retinal oximetry

Timothy D. Weber and Jerome Mertz

Biomed. Opt. Express 9(8), 3867-3882 (2018)  View: HTML | PDF