Methods for detecting host genetic modifiers of tumor vascular function using dynamic near-infrared fluorescence imaging

Jaidip Jagtap, Gayatri Sharma, Abdul K. Parchur, Venkateswara Gogineni, Carmen Bergom, Sarah White, Michael J. Flister, and Amit Joshi

Biomed. Opt. Express 9(2), 543-556 (2018)  View: HTML | PDF  [Suppl. Mat. (2)]

High throughput detection chain for time domain optical mammography

Edoardo Ferocino, Edoardo Martinenghi, Alberto Dalla Mora, Antonio Pifferi, Rinaldo Cubeddu, and Paola Taroni

Biomed. Opt. Express 9(2), 755-770 (2018)  View: HTML | PDF

Coherent anti-Stokes Raman scattering rigid endoscope toward robot-assisted surgery

K. Hirose, T. Aoki, T. Furukawa, S. Fukushima, H. Niioka, S. Deguchi, and M. Hashimoto

Biomed. Opt. Express 9(2), 387-396 (2018)  View: HTML | PDF

Novel endoscope with increased depth of field for imaging human nasal tissue by microscopic optical coherence tomography

Hinnerk Schulz-Hildebrandt, Mario Pieper, Charlotte Stehmar, Martin Ahrens, Christian Idel, Barbara Wollenberg, Peter König, and Gereon Hüttmann

Biomed. Opt. Express 9(2), 636-647 (2018)  View: HTML | PDF  [Suppl. Mat. (2)]

Fiber pattern removal and image reconstruction method for snapshot mosaic hyperspectral endoscopic images

Pu Wang, Gianluca Turcatel, Cosimo Arnesano, David Warburton, Scott E. Fraser, and Francesco Cutrale

Biomed. Opt. Express 9(2), 780-790 (2018)  View: HTML | PDF

Imaging transparent intact cardiac tissue with single-cell resolution

Zhiwei Wang, Jie Zhang, Guangpu Fan, Hui Zhao, Xu Wang, Jing Zhang, Peide Zhang, and Wei Wang

Biomed. Opt. Express 9(2), 423-436 (2018)  View: HTML | PDF  [Suppl. Mat. (3)]

Optical volumetric projection for fast 3D imaging through circularly symmetric pupil engineering

Bo Cai, Xiaomin Zhai, Zeguan Wang, Yan Shen, Ronald Xu, Zachary J. Smith, Quan Wen, and Kaiqin Chu

Biomed. Opt. Express 9(2), 437-446 (2018)  View: HTML | PDF

Two-photon absorption spectra of fluorescent isomorphic DNA base analogs

Alexander Mikhaylov, Sophie de Reguardati, Jüri Pahapill, Patrik R. Callis, Bern Kohler, and Aleksander Rebane

Biomed. Opt. Express 9(2), 447-452 (2018)  View: HTML | PDF

Imaging of pre-mRNA splicing in living subjects using a genetically encoded luciferase reporter

Yaru Shi, Wei Liu, Haifeng Zheng, Zhiqiang Li, Xiaorui Shi, Shixuan Cai, Zhiqiang Jiao, Wenjie Mao, Jinrong Xie, Jie Tian, and Fu Wang

Biomed. Opt. Express 9(2), 518-528 (2018)  View: HTML | PDF

In vivo imaging-guided microsurgery based on femtosecond laser produced new fluorescent compounds in biological tissues

Qiqi Sun, Zhongya Qin, Wanjie Wu, Yue Lin, Congping Chen, Sicong He, Xuesong Li, Zhenguo Wu, Yi Luo, and Jianan Y. Qu

Biomed. Opt. Express 9(2), 581-590 (2018)  View: HTML | PDF  [Suppl. Mat. (3)]

Real-time halo correction in phase contrast imaging

Mikhail E. Kandel, Michael Fanous, Catherine Best-Popescu, and Gabriel Popescu

Biomed. Opt. Express 9(2), 623-635 (2018)  View: HTML | PDF  [Suppl. Mat. (4)]

Modality switching between therapy and imaging based on the excitation wavelength dependence of dual-function agents in folic acid-conjugated graphene oxides

Seung Won Jun, Junyoung Kwon, Soo Kyung Chun, Hyun Ah Lee, Jaebeom Lee, Dae Youn Hwang, Chen-Yuan Dong, and Chang-Seok Kim

Biomed. Opt. Express 9(2), 705-716 (2018)  View: HTML | PDF

Mitigating fringing in discrete frequency infrared imaging using time-delayed integration

Shihao Ran, Sebastian Berisha, Rupali Mankar, Wei-Chuan Shih, and David Mayerich

Biomed. Opt. Express 9(2), 832-843 (2018)  View: HTML | PDF

Bloch surface wave enhanced biosensor for the direct detection of Angiopoietin-2 tumor biomarker in human plasma

Riccardo Rizzo, Maria Alvaro, Norbert Danz, Lucia Napione, Emiliano Descrovi, Stefan Schmieder, Alberto Sinibaldi, Subinoy Rana, Rona Chandrawati, Peter Munzert, Thomas Schubert, Emmanuel Maillart, Aleksei Anopchenko, Paola Rivolo, Alessandro Mascioletti, Erik Förster, Frank Sonntag, Molly M. Stevens, Federico Bussolino, and Francesco Michelotti

Biomed. Opt. Express 9(2), 529-542 (2018)  View: HTML | PDF

Full ocular biometry through dual-depth whole-eye optical coherence tomography

Hyung-Jin Kim, Minji Kim, Min Gyu Hyeon, Youngwoon Choi, and Beop-Min Kim

Biomed. Opt. Express 9(2), 360-372 (2018)  View: HTML | PDF  [Suppl. Mat. (1)]

Holographic line field en-face OCT with digital adaptive optics in the retina in vivo

Laurin Ginner, Tilman Schmoll, Abhishek Kumar, Matthias Salas, Nastassia Pricoupenko, Lara M. Wurster, and Rainer A. Leitgeb

Biomed. Opt. Express 9(2), 472-485 (2018)  View: HTML | PDF  [Suppl. Mat. (1)]

Complex differential variance angiography with noise-bias correction for optical coherence tomography of the retina

Boy Braaf, Sabine Donner, Ahhyun S. Nam, Brett E. Bouma, and Benjamin J. Vakoc

Biomed. Opt. Express 9(2), 486-506 (2018)  View: HTML | PDF

Assessment of temporary cerebral effects induced by focused ultrasound with optical coherence tomography angiography

Meng-Tsan Tsai, Jia-Wei Zhang, Kuo-Chen Wei, Chih-Kuang Yeh, and Hao-Li Liu

Biomed. Opt. Express 9(2), 507-517 (2018)  View: HTML | PDF

Real-time speckle reduction in optical coherence tomography using the dual window method

Yang Zhao, Kengyeh K. Chu, Will J. Eldridge, Evan T. Jelly, Michael Crose, and Adam Wax

Biomed. Opt. Express 9(2), 616-622 (2018)  View: HTML | PDF

Investigation of tissue cellularity at the tip of the core biopsy needle with optical coherence tomography

Nicusor Iftimia, Jesung Park, Gopi Maguluri, Savitri Krishnamurthy, Amanda McWatters, and Sharjeel H. Sabir

Biomed. Opt. Express 9(2), 694-704 (2018)  View: HTML | PDF

Biomechanical assessment of myocardial infarction using optical coherence elastography

Shang Wang, Manmohan Singh, Thuy Tien Tran, John Leach, Salavat R. Aglyamov, Irina V. Larina, James F. Martin, and Kirill V. Larin

Biomed. Opt. Express 9(2), 728-742 (2018)  View: HTML | PDF

Variability of manual ciliary muscle segmentation in optical coherence tomography images

Yu-Cherng Chang, Keke Liu, Florence Cabot, Sonia H. Yoo, Marco Ruggeri, Arthur Ho, Jean-Marie Parel, and Fabrice Manns

Biomed. Opt. Express 9(2), 791-800 (2018)  View: HTML | PDF

Investigation of albumin-derived perfluorocarbon-based capsules by holographic optical trapping

Jannis Köhler, Jegor Ruschke, Katja Bettina Ferenz, Cemal Esen, Michael Kirsch, and Andreas Ostendorf

Biomed. Opt. Express 9(2), 743-754 (2018)  View: HTML | PDF  [Suppl. Mat. (1)]

Optical tweezers system for live stem cell organization at the single-cell level

Peifeng Jing, Yannan Liu, Ethan G. Keeler, Nelly M. Cruz, Benjamin S. Freedman, and Lih Y. Lin

Biomed. Opt. Express 9(2), 771-779 (2018)  View: HTML | PDF  [Suppl. Mat. (3)]

Extreme sensitive metasensor for targeted biomarkers identification using colloidal nanoparticles-integrated plasmonic unit cells

Arash Ahmadivand, Burak Gerislioglu, Asahi Tomitaka, Pandiaraj Manickam, Ajeet Kaushik, Shekhar Bhansali, Madhavan Nair, and Nezih Pala

Biomed. Opt. Express 9(2), 373-386 (2018)  View: HTML | PDF

Automatic interstitial photodynamic therapy planning via convex optimization

Abdul-Amir Yassine, William Kingsford, Yiwen Xu, Jeffrey Cassidy, Lothar Lilge, and Vaughn Betz

Biomed. Opt. Express 9(2), 898-920 (2018)  View: HTML | PDF

Spectrum- and time-resolved endogenous multiphoton signals reveal quantitative differentiation of premalignant and malignant gastric mucosa

Xi Li, Hui Li, Xingzhen He, Tingai Chen, Xianyuan Xia, Chunxia Yang, and Wei Zheng

Biomed. Opt. Express 9(2), 453-471 (2018)  View: HTML | PDF

Diffuse optical monitoring of peripheral tissues during uncontrolled internal hemorrhage in a porcine model

Karthik Vishwanath, Rajan Gurjar, David Wolf, Suzannah Riccardi, Michael Duggan, and David King

Biomed. Opt. Express 9(2), 569-580 (2018)  View: HTML | PDF

Plasmonic nanoparticle-based expansion microscopy with surface-enhanced Raman and dark-field spectroscopic imaging

Camille G. Artur, Tasha Womack, Fusheng Zhao, Jason L. Eriksen, David Mayerich, and Wei-Chuan Shih

Biomed. Opt. Express 9(2), 603-615 (2018)  View: HTML | PDF

Optical property uncertainty estimates for spatial frequency domain imaging

Vivian Pera, Kavon Karrobi, Syeda Tabassum, Fei Teng, and Darren Roblyer

Biomed. Opt. Express 9(2), 661-678 (2018)  View: HTML | PDF  [Suppl. Mat. (1)]

Surface-enhanced Raman scattering for the detection of polycystic ovary syndrome

Ali Momenpour, Patrícia D. A. Lima, Yi-An Chen, Chii-Ruey Tzeng, Benjamin K. Tsang, and Hanan Anis

Biomed. Opt. Express 9(2), 801-817 (2018)  View: HTML | PDF

Detecting brain tumor in pathological slides using hyperspectral imaging

Samuel Ortega, Himar Fabelo, Rafael Camacho, María de la Luz Plaza, Gustavo M. Callicó, and Roberto Sarmiento

Biomed. Opt. Express 9(2), 818-831 (2018)  View: HTML | PDF

Raman spectroscopy combined with a support vector machine for differentiating between feeding male and female infants mother’s milk

Rahat Ullah, Saranjam Khan, Samina Javaid, Hina Ali, Muhammad Bilal, and Muhammad Saleem

Biomed. Opt. Express 9(2), 844-851 (2018)  View: HTML | PDF

Shedding light on the variability of optical skin properties: finding a path towards more accurate prediction of light propagation in human cutaneous compartments

C. Mignon, D. J. Tobin, M. Zeitouny, and N. E. Uzunbajakava

Biomed. Opt. Express 9(2), 852-872 (2018)  View: HTML | PDF

Bounded Kalman filter method for motion-robust, non-contact heart rate estimation

Sakthi Kumar Arul Prakash and Conrad S. Tucker

Biomed. Opt. Express 9(2), 873-897 (2018)  View: HTML | PDF

Multi-modal and multi-vendor retina image registration

Zhang Li, Fan Huang, Jiong Zhang, Behdad Dashtbozorg, Samaneh Abbasi-Sureshjani, Yue Sun, Xi Long, Qifeng Yu, Bart ter Haar Romeny, and Tao Tan

Biomed. Opt. Express 9(2), 410-422 (2018)  View: HTML | PDF

In vivo retinal imaging for fixational eye motion detection using a high-speed digital micromirror device (DMD)-based ophthalmoscope

Kari V. Vienola, Mathi Damodaran, Boy Braaf, Koenraad A. Vermeer, and Johannes F. de Boer

Biomed. Opt. Express 9(2), 591-602 (2018)  View: HTML | PDF  [Suppl. Mat. (1)]

Use of focus measure operators for characterization of flood illumination adaptive optics ophthalmoscopy image quality

David Alonso-Caneiro, Danuta M. Sampson, Avenell L. Chew, Michael J. Collins, and Fred K. Chen

Biomed. Opt. Express 9(2), 679-693 (2018)  View: HTML | PDF

Fixational eye movement: a negligible source of dynamic aberration

Pedro Mecê, Jessica Jarosz, Jean-Marc Conan, Cyril Petit, Kate Grieve, Michel Paques, and Serge Meimon

Biomed. Opt. Express 9(2), 717-727 (2018)  View: HTML | PDF  [Suppl. Mat. (1)]

Time-resolved fluorescence spectroscopy for clinical diagnosis of actinic cheilitis: erratum

Alessandro Cosci, Marcelo Saito Nogueira, Sebastião Prataviera, Ademar Takahama, Rebeca de Souza Azevedo, and Cristina Kurachi

Biomed. Opt. Express 9(2), 648-648 (2018)  View: HTML | PDF

Raman spectral post-processing for oral tissue discrimination – a step for an automatized diagnostic system: erratum

Luis Felipe C. S. Carvalho, Marcelo Saito Nogueira, Lázaro P. M. Neto, Tanmoy T. Bhattacharjee, and Airton A. Martin

Biomed. Opt. Express 9(2), 649-649 (2018)  View: HTML | PDF