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OSA Publishing

1 November 2016, Volume 7, Issue 11, pp. 4364-4826   40 articles

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Introduction to the BIOMED 2016 feature issue

Biomed. Opt. Express 7(11), 4415-4415 (2016)  View: HTML | PDF

Microscopy

Diet-induced obesity skin changes monitored by in vivo SHG and ex vivo CARS microscopy

Biomed. Opt. Express 7(11), 4480-4489 (2016)  View: HTML | PDF

Optical Coherence Tomography

Extended-focus optical coherence microscopy for high-resolution imaging of the murine brain

Biomed. Opt. Express 7(11), 4400-4414 (2016)  View: HTML | PDF  [Suppl. Mat. (1)]

Tissue Optics and Spectroscopy

Cerebral blood flow is decoupled from blood pressure and linked to EEG bursting after resuscitation from cardiac arrest

Biomed. Opt. Express 7(11), 4660-4673 (2016)  View: HTML | PDF

Diffuse Optical Imaging

Development of a multi-wavelength diffuse optical tomography system for early diagnosis of rheumatoid arthritis: simulation, phantoms and healthy human studies

Biomed. Opt. Express 7(11), 4769-4786 (2016)  View: HTML | PDF

Diffuse and Fluorescence Tomography

Non-stationary reconstruction for dynamic fluorescence molecular tomography with extended kalman filter

Biomed. Opt. Express 7(11), 4527-4542 (2016)  View: HTML | PDF

Endoscopy and Fiber Optics

Fabrication and analysis of microfiber array platform for optogenetics with cellular resolution

Biomed. Opt. Express 7(11), 4416-4423 (2016)  View: HTML | PDF

Microscopy

Optical redox ratio identifies metastatic potential-dependent changes in breast cancer cell metabolism

Biomed. Opt. Express 7(11), 4364-4374 (2016)  View: HTML | PDF

Rapid mesoscale multiphoton microscopy of human skin

Biomed. Opt. Express 7(11), 4375-4387 (2016)  View: HTML | PDF  [Suppl. Mat. (2)]

Motion-corrected Fourier ptychography

Biomed. Opt. Express 7(11), 4543-4553 (2016)  View: HTML | PDF

Ultrahigh-speed, phase-sensitive full-field interferometric confocal microscopy for quantitative microscale physiology

Biomed. Opt. Express 7(11), 4674-4684 (2016)  View: HTML | PDF  [Suppl. Mat. (4)]

Single-frame rapid autofocusing for brightfield and fluorescence whole slide imaging

Biomed. Opt. Express 7(11), 4763-4768 (2016)  View: HTML | PDF

Wide-field Fourier ptychographic microscopy using laser illumination source

Biomed. Opt. Express 7(11), 4787-4802 (2016)  View: HTML | PDF

Simple approach to three-color two-photon microscopy by a fiber-optic wavelength convertor

Biomed. Opt. Express 7(11), 4803-4815 (2016)  View: HTML | PDF

Optical Biophysics and Photobiology

Characterization of fiber-optic light delivery and light-induced temperature changes in a rodent brain for precise optogenetic neuromodulation

Biomed. Opt. Express 7(11), 4450-4471 (2016)  View: HTML | PDF

Photolysis of a peptide with N-peptidyl-7-nitroindoline units using two-photon absorption

Biomed. Opt. Express 7(11), 4654-4659 (2016)  View: HTML | PDF

Optical Coherence Tomography

Influence of coherence length, signal-to-noise ratio, log transform, and low-pass filtering on layer thickness assessment with OCT in the retina

Biomed. Opt. Express 7(11), 4490-4500 (2016)  View: HTML | PDF

Intracellular dynamics measurements with full field optical coherence tomography suggest hindering effect of actomyosin contractility on organelle transport

Biomed. Opt. Express 7(11), 4501-4513 (2016)  View: HTML | PDF

Label-free fast 3D coherent imaging reveals pancreatic islet micro-vascularization and dynamic blood flow

Biomed. Opt. Express 7(11), 4569-4580 (2016)  View: HTML | PDF

Long-range, wide-field swept-source optical coherence tomography with GPU accelerated digital lock-in Doppler vibrography for real-time, in vivo middle ear diagnostics

Biomed. Opt. Express 7(11), 4621-4635 (2016)  View: HTML | PDF  [Suppl. Mat. (5)]

Nonlinear characterization of elasticity using quantitative optical coherence elastography

Biomed. Opt. Express 7(11), 4702-4710 (2016)  View: HTML | PDF  [Suppl. Mat. (1)]

Long-range and wide field of view optical coherence tomography for in vivo 3D imaging of large volume object based on akinetic programmable swept source

Biomed. Opt. Express 7(11), 4734-4748 (2016)  View: HTML | PDF

Development and preliminary results of bimanual smart micro-surgical system using a ball-lens coupled OCT distance sensor

Biomed. Opt. Express 7(11), 4816-4826 (2016)  View: HTML | PDF

Photoacoustic Imaging and Spectroscopy

Combined frequency domain photoacoustic and ultrasound imaging for intravascular applications

Biomed. Opt. Express 7(11), 4441-4449 (2016)  View: HTML | PDF

Terahertz Spectroscopy and Imaging

Terahertz identification and quantification of neurotransmitter and neurotrophy mixture

Biomed. Opt. Express 7(11), 4472-4479 (2016)  View: HTML | PDF

Freeze-thaw hysteresis effects in terahertz imaging of biomedical tissues

Biomed. Opt. Express 7(11), 4711-4717 (2016)  View: HTML | PDF

Therapeutic Laser Applications

Thermal therapy with magnetic nanoparticles for cell destruction

Biomed. Opt. Express 7(11), 4581-4594 (2016)  View: HTML | PDF

Kagome fiber based ultrafast laser microsurgery probe delivering micro-Joule pulse energies

Biomed. Opt. Express 7(11), 4639-4653 (2016)  View: HTML | PDF

Tissue Optics and Spectroscopy

Multi-channel multi-distance broadband near-infrared spectroscopy system to measure the spatial response of cellular oxygen metabolism and tissue oxygenation

Biomed. Opt. Express 7(11), 4424-4440 (2016)  View: HTML | PDF

Subtraction-based approach for enhancing the depth sensitivity of time-resolved NIRS

Biomed. Opt. Express 7(11), 4514-4526 (2016)  View: HTML | PDF

Quantifying the effect of adipose tissue in muscle oximetry by near infrared spectroscopy

Biomed. Opt. Express 7(11), 4605-4619 (2016)  View: HTML | PDF

In-vivo monitoring of tissue oxygen saturation in deep brain structures using a single fiber optical system

Biomed. Opt. Express 7(11), 4685-4694 (2016)  View: HTML | PDF

Experimental results of full scattering profile from finger tissue-like phantom

Biomed. Opt. Express 7(11), 4695-4701 (2016)  View: HTML | PDF

Skin inhomogeneity as a source of error in remote PPG-imaging

Biomed. Opt. Express 7(11), 4718-4733 (2016)  View: HTML | PDF

Using electron microscopy to calculate optical properties of biological samples

Biomed. Opt. Express 7(11), 4749-4762 (2016)  View: HTML | PDF

Vision and Visual Optics

Perceived image quality with simulated segmented bifocal corrections

Biomed. Opt. Express 7(11), 4388-4399 (2016)  View: HTML | PDF

Spotlight on Optics

Photoreceptor disc shedding in the living human eye

Biomed. Opt. Express 7(11), 4554-4568 (2016)  View: HTML | PDF  [Suppl. Mat. (1)]

Quantifying intraocular scatter with near diffraction-limited double-pass point spread function

Biomed. Opt. Express 7(11), 4595-4604 (2016)  View: HTML | PDF

Optical Coherence Tomography

Estimation of Jones matrix, birefringence and entropy using Cloude-Pottier decomposition in polarization-sensitive optical coherence tomography: erratum

Biomed. Opt. Express 7(11), 4636-4638 (2016)  View: HTML | PDF

Vision and Visual Optics

Perceived image quality with simulated segmented bifocal corrections: publisher’s note

Biomed. Opt. Express 7(11), 4620-4620 (2016)  View: HTML | PDF

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