Biomedical Optics Express

Biomolecule-to-fluorescent-color encoder: modulation of fluorescence emission via DNA structural changes

Takahiro Nishimura, Yusuke Ogura, Kenji Yamada, Yuko Ohno, and Jun Tanida

Biomed. Opt. Express 5(7), 2082-2090 (2014)  View: HTML | PDF

Determination of reference values for optical properties of liquid phantoms based on Intralipid and India ink

L. Spinelli, M. Botwicz, N. Zolek, M. Kacprzak, D. Milej, P. Sawosz, A. Liebert, U. Weigel, T. Durduran, F. Foschum, A. Kienle, F. Baribeau, S. Leclair, J.-P. Bouchard, I. Noiseux, P. Gallant, O. Mermut, A. Farina, A. Pifferi, A. Torricelli, R. Cubeddu, H.-C. Ho, M. Mazurenka, H. Wabnitz, K. Klauenberg, O. Bodnar, C. Elster, M. Bénazech-Lavoué, Y. Bérubé-Lauzière, F. Lesage, D. Khoptyar, A. A. Subash, S. Andersson-Engels, P. Di Ninni, F. Martelli, and G. Zaccanti

Biomed. Opt. Express 5(7), 2037-2053 (2014)  View: HTML | PDF

A quantitative method for measurement of HL-60 cell apoptosis based on diffraction imaging flow cytometry technique

Xu Yang, Yuanming Feng, Yahui Liu, Ning Zhang, Wang Lin, Yu Sa, and Xin-Hua Hu

Biomed. Opt. Express 5(7), 2172-2183 (2014)  View: HTML | PDF

In-vivo imaging of psoriatic lesions with polarization multispectral dermoscopy and multiphoton microscopy

Dimitrios Kapsokalyvas, Riccardo Cicchi, Nicola Bruscino, Domenico Alfieri, Francesca Prignano, Daniela Massi, Torello Lotti, and Francesco S. Pavone

Biomed. Opt. Express 5(7), 2405-2419 (2014)  View: HTML | PDF

Analysis of macular OCT images using deformable registration

Min Chen, Andrew Lang, Howard S. Ying, Peter A. Calabresi, Jerry L. Prince, and Aaron Carass

Biomed. Opt. Express 5(7), 2196-2214 (2014)  View: HTML | PDF

Detecting abnormality in optic nerve head images using a feature extraction analysis

Haogang Zhu, Ali Poostchi, Stephen A Vernon, and David P Crabb

Biomed. Opt. Express 5(7), 2215-2230 (2014)  View: HTML | PDF

Integral-geometry characterization of photobiomodulation effects on retinal vessel morphology

Marconi Barbosa, Riccardo Natoli, Kriztina Valter, Jan Provis, and Ted Maddess

Biomed. Opt. Express 5(7), 2317-2332 (2014)  View: HTML | PDF

Probability method for Cerenkov luminescence tomography based on conformance error minimization

Xintao Ding, Kun Wang, Biao Jie, Yonglong Luo, Zhenhua Hu, and Jie Tian

Biomed. Opt. Express 5(7), 2091-2112 (2014)  View: HTML | PDF

Vibrationally resonant sum-frequency generation microscopy with a solid immersion lens

Eun Seong Lee, Sang-Won Lee, Julie Hsu, and Eric O. Potma

Biomed. Opt. Express 5(7), 2125-2134 (2014)  View: HTML | PDF

Molecular orientation sensitive second harmonic microscopy by radially and azimuthally polarized light

Tobias Ehmke, Tim Heiko Nitzsche, Andreas Knebl, and Alexander Heisterkamp

Biomed. Opt. Express 5(7), 2231-2246 (2014)  View: HTML | PDF

Multiplexed coded illumination for Fourier Ptychography with an LED array microscope

Lei Tian, Xiao Li, Kannan Ramchandran, and Laura Waller

Biomed. Opt. Express 5(7), 2376-2389 (2014)  View: HTML | PDF

Multi-modal label-free imaging based on a femtosecond fiber laser

Ruxin Xie, Jue Su, Eric C. Rentchler, Ziyan Zhang, Carey K. Johnson, Honglian Shi, and Rongqing Hui

Biomed. Opt. Express 5(7), 2390-2396 (2014)  View: HTML | PDF

Integrated photoacoustic, ultrasound and fluorescence platform for diagnostic medical imaging-proof of concept study with a tissue mimicking phantom

Joseph James, Vadakke Matham Murukeshan, and Lye Sun Woh

Biomed. Opt. Express 5(7), 2135-2144 (2014)  View: HTML | PDF

An effective nanosensor for organic molecules based on water-soluble mercaptopropionic acid-capped CdTe nanocrystals with potential application in high-throughput screening and high-resolution optical microscopy

Pick-Chung Lau, Robert A. Norwood, Masud Mansuripur, and Nasser Peyghambarian

Biomed. Opt. Express 5(7), 2420-2434 (2014)  View: HTML | PDF

Multi-photon excited luminescence of magnetic FePt core-shell nanoparticles

K.M. Seemann and B. Kuhn

Biomed. Opt. Express 5(7), 2446-2457 (2014)  View: HTML | PDF

Exploring diazepam’s effect on hemodynamic responses of mouse brain tissue by optical spectroscopic imaging

David Abookasis, Ariel Shochat, Elimelech Nesher, and Albert Pinhasov

Biomed. Opt. Express 5(7), 2184-2195 (2014)  View: HTML | PDF

Noninvasive in vivo glucose sensing on human subjects using mid-infrared light

Sabbir Liakat, Kevin A. Bors, Laura Xu, Callie M. Woods, Jessica Doyle, and Claire F. Gmachl

Biomed. Opt. Express 5(7), 2397-2404 (2014)  View: HTML | PDF

Modelling of diffraction grating based optical filters for fluorescence detection of biomolecules

M. Kovačič, J. Krč, B. Lipovšek, and M. Topič

Biomed. Opt. Express 5(7), 2285-2300 (2014)  View: HTML | PDF

Adaptive optics optical coherence tomography with dynamic retinal tracking

Omer P. Kocaoglu, R. Daniel Ferguson, Ravi S. Jonnal, Zhuolin Liu, Qiang Wang, Daniel X. Hammer, and Donald T. Miller

Biomed. Opt. Express 5(7), 2262-2284 (2014)  View: HTML | PDF  [Suppl. Mat. (3)]

Noncontact quantitative biomechanical characterization of cardiac muscle using shear wave imaging optical coherence tomography

Shang Wang, Andrew L. Lopez, Yuka Morikawa, Ge Tao, Jiasong Li, Irina V. Larina, James F. Martin, and Kirill V. Larin

Biomed. Opt. Express 5(7), 1980-1992 (2014)  View: HTML | PDF  [Suppl. Mat. (1)]

Investigation of temporal vascular effects induced by focused ultrasound treatment with speckle-variance optical coherence tomography

Meng-Tsan Tsai, Feng-Yu Chang, Cheng-Kuang Lee, Cihun-Siyong Alex Gong, Yu-Xiang Lin, Jiann-Der Lee, Chih-Hsun Yang, and Hao-Li Liu

Biomed. Opt. Express 5(7), 2009-2022 (2014)  View: HTML | PDF  [Suppl. Mat. (1)]

Variations in optical coherence tomography resolution and uniformity: a multi-system performance comparison

Anthony Fouad, T. Joshua Pfefer, Chao-Wei Chen, Wei Gong, Anant Agrawal, Peter H. Tomlins, Peter D. Woolliams, Rebekah A. Drezek, and Yu Chen

Biomed. Opt. Express 5(7), 2066-2081 (2014)  View: HTML | PDF  [Suppl. Mat. (17)]

Optical coherence micro-elastography: mechanical-contrast imaging of tissue microstructure

Brendan F. Kennedy, Robert A. McLaughlin, Kelsey M. Kennedy, Lixin Chin, Andrea Curatolo, Alan Tien, Bruce Latham, Christobel M. Saunders, and David D. Sampson

Biomed. Opt. Express 5(7), 2113-2124 (2014)  View: HTML | PDF  [Suppl. Mat. (1)]

Magnetomotive optical coherence elastography using magnetic particles to induce mechanical waves

Adeel Ahmad, Jongsik Kim, Nahil A. Sobh, Nathan D. Shemonski, and Stephen A. Boppart

Biomed. Opt. Express 5(7), 2349-2361 (2014)  View: HTML | PDF  [Suppl. Mat. (3)]

A 5-mm piezo-scanning fiber device for high speed ultrafast laser microsurgery

Onur Ferhanoglu, Murat Yildirim, Kaushik Subramanian, and Adela Ben-Yakar

Biomed. Opt. Express 5(7), 2023-2036 (2014)  View: HTML | PDF

Artificially-induced organelles are optimal targets for optical trapping experiments in living cells

C. López-Quesada, A.-S. Fontaine, A. Farré, M. Joseph, J. Selva, G. Egea, M. D. Ludevid, E. Martín-Badosa, and M. Montes-Usategui

Biomed. Opt. Express 5(7), 1993-2008 (2014)  View: HTML | PDF  [Suppl. Mat. (1)]

Controlled 3D rotation of biological cells using optical multiple-force clamps

Yoshio Tanaka and Shin-ich Wakida

Biomed. Opt. Express 5(7), 2341-2348 (2014)  View: HTML | PDF  [Suppl. Mat. (4)]

In vivo hyperspectral imaging of microvessel response to trastuzumab treatment in breast cancer xenografts

Devin R. McCormack, Alex J. Walsh, Wesley Sit, Carlos L. Arteaga, Jin Chen, Rebecca S. Cook, and Melissa C. Skala

Biomed. Opt. Express 5(7), 2247-2261 (2014)  View: HTML | PDF

Quantifying tissue mechanical properties using photoplethysmography

Tony J. Akl, Mark A. Wilson, M. Nance Ericson, and Gerard L. Coté

Biomed. Opt. Express 5(7), 2362-2375 (2014)  View: HTML | PDF

Non-contact small animal fluorescence imaging system for simultaneous multi-directional angular-dependent data acquisition

Jong Hwan Lee, Hyun Keol Kim, Chandhanarat Chandhanayingyong, Francis Young-In Lee, and Andreas H. Hielscher

Biomed. Opt. Express 5(7), 2301-2316 (2014)  View: HTML | PDF

Dynamic light scattering from pulsatile flow in the presence of induced motion artifacts

M. Nemati, C. N. Presura, H. P. Urbach, and N. Bhattacharya

Biomed. Opt. Express 5(7), 2145-2156 (2014)  View: HTML | PDF

Optimization of camera exposure durations for multi-exposure speckle imaging of the microcirculation

S. M. Shams Kazmi, Satyajit Balial, and Andrew K. Dunn

Biomed. Opt. Express 5(7), 2157-2171 (2014)  View: HTML | PDF

Temperature-sensitive gating of hCx26: high-resolution Raman spectroscopy sheds light on conformational changes

Ann-Kathrin Kniggendorf, Merve Meinhardt-Wollweber, Xiaogang Yuan, Bernhard Roth, Astrid Seifert, Niels Fertig, and Carsten Zeilinger

Biomed. Opt. Express 5(7), 2054-2065 (2014)  View: HTML | PDF

Classification for breast cancer diagnosis with Raman spectroscopy

Qingbo Li, Qishuo Gao, and Guangjun Zhang

Biomed. Opt. Express 5(7), 2435-2445 (2014)  View: HTML | PDF