OSA Publishing

1 November 2012, Volume 3, Issue 11, pp. 2694-3032   30 articles

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Introduction to the BIOMED 2012 Feature Issue

Biomed. Opt. Express 3(11), 2771-2771 (2012)  View: HTML | PDF

Microscopy

Imaging morphodynamics of human blood cells in vivo with video-rate third harmonic generation microscopy

Biomed. Opt. Express 3(11), 2860-2865 (2012)  View: HTML | PDF

Dynamic quantitative phase imaging for biological objects using a pixelated phase mask

Biomed. Opt. Express 3(11), 2866-2880 (2012)  View: HTML | PDF  [Suppl. Mat. (10)]

Optical Coherence Tomography

Large-field high-speed polarization sensitive spectral domain OCT and its applications in ophthalmology

Biomed. Opt. Express 3(11), 2720-2732 (2012)  View: HTML | PDF  [Suppl. Mat. (2)]

Optics of Tissue and Turbid Media

Elliptically polarized light for depth resolved optical imaging

Biomed. Opt. Express 3(11), 2907-2915 (2012)  View: HTML | PDF

Photoacoustic Imaging and Spectroscopy

Laser-scanning photoacoustic microscopy with ultrasonic phased array transducer

Biomed. Opt. Express 3(11), 2694-2698 (2012)  View: HTML | PDF

Spectroscopic Diagnostics

Broadband continuous-wave technique to measure baseline values and changes in the tissue chromophore concentrations

Biomed. Opt. Express 3(11), 2761-2770 (2012)  View: HTML | PDF

Biodefense and Bioterrorism

Standoff detection of biological agents using laser induced fluorescence—a comparison of 294 nm and 355 nm excitation wavelengths

Biomed. Opt. Express 3(11), 2964-2975 (2012)  View: HTML | PDF

Biosensors and Molecular Diagnostics

Tissue dynamics spectroscopy for phenotypic profiling of drug effects in three-dimensional culture

Biomed. Opt. Express 3(11), 2825-2841 (2012)  View: HTML | PDF

Endoscopes, Catheters and Micro-Optics

An all-fiber-optic endoscopy platform for simultaneous OCT and fluorescence imaging

Biomed. Opt. Express 3(11), 2851-2859 (2012)  View: HTML | PDF  [Suppl. Mat. (1)]

Image Processing

Automatic stent detection in intravascular OCT images using bagged decision trees

Biomed. Opt. Express 3(11), 2809-2824 (2012)  View: HTML | PDF

Image Reconstruction and Inverse Problems

Digital focusing of OCT images based on scalar diffraction theory and information entropy

Biomed. Opt. Express 3(11), 2774-2783 (2012)  View: HTML | PDF  [Suppl. Mat. (2)]

Self-calibrated algorithms for diffuse optical tomography and bioluminescence tomography using relative transmission images

Biomed. Opt. Express 3(11), 2794-2808 (2012)  View: HTML | PDF

Comparative studies of lp-regularization-based reconstruction algorithms for bioluminescence tomography

Biomed. Opt. Express 3(11), 2916-2936 (2012)  View: HTML | PDF

Microfluidics

Integration of optical components on-chip for scattering and fluorescence detection in an optofluidic device

Biomed. Opt. Express 3(11), 2784-2793 (2012)  View: HTML | PDF

Microscopy

Coherent anti-Stokes Raman scattering and spontaneous Raman spectroscopy and microscopy of microalgae with nitrogen depletion

Biomed. Opt. Express 3(11), 2896-2906 (2012)  View: HTML | PDF

Neuroscience and Brain Imaging

In vivo detection of cortical optical changes associated with seizure activity with optical coherence tomography

Biomed. Opt. Express 3(11), 2700-2706 (2012)  View: HTML | PDF

Noninvasive Optical Diagnostics

Noninvasive glucose detection in human skin using wavelength modulated differential laser photothermal radiometry

Biomed. Opt. Express 3(11), 3012-3021 (2012)  View: HTML | PDF

Ophthalmology Applications

Optical clearing of archive-compatible paraffin embedded tissue for multiphoton microscopy

Biomed. Opt. Express 3(11), 2752-2760 (2012)  View: HTML | PDF  [Suppl. Mat. (12)]

Real-time eye motion compensation for OCT imaging with tracking SLO

Biomed. Opt. Express 3(11), 2950-2963 (2012)  View: HTML | PDF  [Suppl. Mat. (2)]

Optical Coherence Tomography

Retinal, anterior segment and full eye imaging using ultrahigh speed swept source OCT with vertical-cavity surface emitting lasers

Biomed. Opt. Express 3(11), 2733-2751 (2012)  View: HTML | PDF  [Suppl. Mat. (1)]

In vivo photothermal optical coherence tomography of gold nanorod contrast agents

Biomed. Opt. Express 3(11), 2881-2895 (2012)  View: HTML | PDF

Optical microangiography of retina and choroid and measurement of total retinal blood flow in mice

Biomed. Opt. Express 3(11), 2976-2986 (2012)  View: HTML | PDF  [Suppl. Mat. (1)]

High-speed polarization sensitive optical coherence tomography scan engine based on Fourier domain mode locked laser

Biomed. Opt. Express 3(11), 2987-3000 (2012)  View: HTML | PDF  [Suppl. Mat. (3)]

4D shear stress maps of the developing heart using Doppler optical coherence tomography

Biomed. Opt. Express 3(11), 3022-3032 (2012)  View: HTML | PDF  [Suppl. Mat. (1)]

Optics of Tissue and Turbid Media

Goniometric measurements of thick tissue using Monte Carlo simulations to obtain the single scattering anisotropy coefficient

Biomed. Opt. Express 3(11), 2707-2719 (2012)  View: HTML | PDF

Radiance detection of non-scattering inclusions in turbid media

Biomed. Opt. Express 3(11), 3001-3011 (2012)  View: HTML | PDF

Spectroscopic Diagnostics

Terahertz time-domain spectroscopy for monitoring the curing of dental composites

Biomed. Opt. Express 3(11), 2842-2850 (2012)  View: HTML | PDF

Selective detection of bacterial layers with terahertz plasmonic antennas

Biomed. Opt. Express 3(11), 2937-2949 (2012)  View: HTML | PDF

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