Abstract

Simulations and phantom measurements are used to evaluate the ability of time-domain diffuse optical tomography using Mellin-Laplace transforms to quantify the absorption perturbation of centimetric objects immersed at depth 1-2 cm in turbid media. We find that the estimated absorption coefficient varies almost linearly with the absorption change in the range of 0-0.15 cm−1 but is underestimated by a factor that depends on the inclusion depth (~2, 3 and 6 for depths of 1.0, 1.5 and 2.0 cm respectively). For larger absorption changes, the variation is sublinear with ~20% decrease for δμa = 0.37 cm−1. By contrast, constraining the absorption change to the actual volume of the inclusion may considerably improve the accuracy and linearity of the reconstructed absorption.

© 2016 Optical Society of America

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Corrections

14 November 2016: A correction was made to the author affiliations.


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References

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    [Crossref] [PubMed]

2016 (2)

P.-Y. Lin, K. Hagan, A. Fenoglio, P. E. Grant, and M. A. Franceschini, “Reduced cerebral blood flow and oxygen metabolism in extremely preterm neonates with low-grade germinal matrix- intraventricular hemorrhage,” Sci. Rep. 6, 25903 (2016).
[Crossref] [PubMed]

L. Di Sieno, G. Bettega, M. Berger, C. Hamou, M. Aribert, A. D. Mora, A. Puszka, H. Grateau, D. Contini, L. Hervé, J.-L. Coll, J.-M. Dinten, A. Pifferi, and A. Planat-Chrétien, “Toward noninvasive assessment of flap viability with time-resolved diffuse optical tomography: a preclinical test on rats,” J. Biomed. Opt. 21(2), 025004 (2016).
[Crossref] [PubMed]

2015 (2)

2014 (6)

H. Wabnitz, D. R. Taubert, M. Mazurenka, O. Steinkellner, A. Jelzow, R. Macdonald, D. Milej, P. Sawosz, M. Kacprzak, A. Liebert, R. Cooper, J. Hebden, A. Pifferi, A. Farina, I. Bargigia, D. Contini, M. Caffini, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Torricelli, “Performance assessment of time-domain optical brain imagers, part 1: basic instrumental performance protocol,” J. Biomed. Opt. 19(8), 086010 (2014).
[Crossref] [PubMed]

H. Wabnitz, A. Jelzow, M. Mazurenka, O. Steinkellner, R. Macdonald, D. Milej, N. Żołek, M. Kacprzak, P. Sawosz, R. Maniewski, A. Liebert, S. Magazov, J. Hebden, F. Martelli, P. Di Ninni, G. Zaccanti, A. Torricelli, D. Contini, R. Re, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Pifferi, “Performance assessment of time-domain optical brain imagers, part 2: nEUROPt protocol,” J. Biomed. Opt. 19(8), 086012 (2014).
[Crossref] [PubMed]

L. Spinelli, M. Botwicz, N. Zolek, M. Kacprzak, D. Milej, P. Sawosz, A. Liebert, U. Weigel, T. Durduran, F. Foschum, A. Kienle, F. Baribeau, S. Leclair, J.-P. Bouchard, I. Noiseux, P. Gallant, O. Mermut, A. Farina, A. Pifferi, A. Torricelli, R. Cubeddu, H.-C. Ho, M. Mazurenka, H. Wabnitz, K. Klauenberg, O. Bodnar, C. Elster, M. Bénazech-Lavoué, Y. Bérubé-Lauzière, F. Lesage, D. Khoptyar, A. A. Subash, S. Andersson-Engels, P. Di Ninni, F. Martelli, and G. Zaccanti, “Determination of reference values for optical properties of liquid phantoms based on Intralipid and India ink,” Biomed. Opt. Express 5(7), 2037–2053 (2014).
[Crossref] [PubMed]

L. D. Sieno, A. D. Mora, G. Boso, A. Tosi, A. Pifferi, R. Cubeddu, and D. Contini, “Diffuse optics using a dual window fast-gated counter,” Appl. Opt. 53(31), 7394–7401 (2014).
[Crossref] [PubMed]

G. Quarto, L. Spinelli, A. Pifferi, A. Torricelli, R. Cubeddu, F. Abbate, N. Balestreri, S. Menna, E. Cassano, and P. Taroni, “Estimate of tissue composition in malignant and benign breast lesions by time-domain optical mammography,” Biomed. Opt. Express 5(10), 3684–3698 (2014).
[Crossref] [PubMed]

A. T. Eggebrecht, S. L. Ferradal, A. Robichaux-Viehoever, M. S. Hassanpour, H. Dehghani, A. Z. Snyder, T. Hershey, and J. P. Culver, “Mapping distributed brain function and networks with diffuse optical tomography,” Nat. Photonics 8(6), 448–454 (2014).
[Crossref] [PubMed]

2013 (4)

A. Puszka, L. Hervé, A. Planat-Chrétien, A. Koenig, J. Derouard, and J.-M. Dinten, “Time-domain reflectance diffuse optical tomography with Mellin-Laplace transform for experimental detection and depth localization of a single absorbing inclusion,” Biomed. Opt. Express 4(4), 569–583 (2013).
[Crossref] [PubMed]

A. Puszka, L. Di Sieno, A. D. Mora, A. Pifferi, D. Contini, G. Boso, A. Tosi, L. Hervé, A. Planat-Chrétien, A. Koenig, and J.-M. Dinten, “Time-resolved diffuse optical tomography using fast-gated single-photon avalanche diodes,” Biomed. Opt. Express 4(8), 1351–1365 (2013).
[Crossref] [PubMed]

F. Martelli, A. Pifferi, D. Contini, L. Spinelli, A. Torricelli, H. Wabnitz, R. Macdonald, A. Sassaroli, and G. Zaccanti, “Phantoms for diffuse optical imaging based on totally absorbing objects, part 1: Basic concepts,” J. Biomed. Opt. 18(6), 066014 (2013).
[Crossref] [PubMed]

G. Boso, A. Dalla Mora, A. Della Frera, and A. Tosi, “Fast-gating of single-photon avalanche diodes with 200ps transitions and 30ps timing jitter,” Sens. Actuators A Phys. 191, 61–67 (2013).
[Crossref]

2012 (3)

2011 (2)

A. Tosi, A. Dalla Mora, F. Zappa, A. Gulinatti, D. Contini, A. Pifferi, L. Spinelli, A. Torricelli, and R. Cubeddu, “Fast-gated single-photon counting technique widens dynamic range and speeds up acquisition time in time-resolved measurements,” Opt. Express 19(11), 10735–10746 (2011).
[Crossref] [PubMed]

B. W. Pogue, S. C. Davis, F. Leblond, M. A. Mastanduno, H. Dehghani, and K. D. Paulsen, “Implicit and explicit prior information in near-infrared spectral imaging: accuracy, quantification and diagnostic value,” Philos Trans A 369(1955), 4531–4557 (2011).
[Crossref] [PubMed]

2010 (2)

2009 (1)

S. R. Arridge and J. C. Schotland, “Optical tomography: forward and inverse problems,” Inverse Probl. 25(12), 123010 (2009).
[Crossref]

2008 (2)

A. Pifferi, A. Torricelli, L. Spinelli, D. Contini, R. Cubeddu, F. Martelli, G. Zaccanti, A. Tosi, A. Dalla Mora, F. Zappa, and S. Cova, “Time-Resolved Diffuse Reflectance Using Small Source-Detector Separation and Fast Single-Photon Gating,” Phys. Rev. Lett. 100(13), 138101 (2008).
[Crossref] [PubMed]

Z. Yuan, Q. Zhang, E. S. Sobel, and H. Jiang, “Tomographic x-ray-guided three-dimensional diffuse optical tomography of osteoarthritis in the finger joints,” J. Biomed. Opt. 13(4), 044006 (2008).
[Crossref] [PubMed]

2005 (3)

S. C. Davis, B. W. Pogue, H. Dehghani, and K. D. Paulsen, “Contrast-detail analysis characterizing diffuse optical fluorescence tomography image reconstruction,” J. Biomed. Opt. 10(5), 050501 (2005).
[Crossref] [PubMed]

A. Torricelli, A. Pifferi, L. Spinelli, R. Cubeddu, F. Martelli, S. Del Bianco, and G. Zaccanti, “Time-Resolved Reflectance At Null Source-Detector Separation: Improving Contrast and Resolution In Diffuse Optical Imaging,” Phys. Rev. Lett. 95(7), 078101 (2005).
[Crossref] [PubMed]

A. Pifferi, A. Torricelli, A. Bassi, P. Taroni, R. Cubeddu, H. Wabnitz, D. Grosenick, M. Möller, R. Macdonald, J. Swartling, T. Svensson, S. Andersson-Engels, R. L. P. van Veen, H. J. C. M. Sterenborg, J.-M. Tualle, H. L. Nghiem, S. Avrillier, M. Whelan, and H. Stamm, “Performance assessment of photon migration instruments: the MEDPHOT protocol,” Appl. Opt. 44(11), 2104–2114 (2005).
[Crossref] [PubMed]

2004 (1)

S. Srinivasan, B. W. Pogue, H. Dehghani, S. Jiang, X. Song, and K. D. Paulsen, “Improved quantification of small objects in near-infrared diffuse optical tomography,” J. Biomed. Opt. 9(6), 1161–1171 (2004).
[Crossref] [PubMed]

2003 (3)

J. P. Culver, T. Durduran, D. Furuya, C. Cheung, J. H. Greenberg, and A. G. Yodh, “Diffuse optical tomography of cerebral blood flow, oxygenation, and metabolism in rat during focal ischemia,” J. Cereb. Blood Flow Metab. 23(8), 911–924 (2003).
[Crossref] [PubMed]

H. Dehghani, B. W. Pogue, J. Shudong, B. Brooksby, and K. D. Paulsen, “Three-dimensional optical tomography: resolution in small-object imaging,” Appl. Opt. 42(16), 3117–3128 (2003).
[Crossref] [PubMed]

J. P. Culver, R. Choe, M. J. Holboke, L. Zubkov, T. Durduran, A. Slemp, V. Ntziachristos, B. Chance, and A. G. Yodh, “Three-dimensional diffuse optical tomography in the parallel plane transmission geometry: evaluation of a hybrid frequency domain/continuous wave clinical system for breast imaging,” Med. Phys. 30(2), 235–247 (2003).
[Crossref] [PubMed]

2001 (1)

1999 (2)

Abbate, F.

Andersson-Engels, S.

Aribert, M.

L. Di Sieno, G. Bettega, M. Berger, C. Hamou, M. Aribert, A. D. Mora, A. Puszka, H. Grateau, D. Contini, L. Hervé, J.-L. Coll, J.-M. Dinten, A. Pifferi, and A. Planat-Chrétien, “Toward noninvasive assessment of flap viability with time-resolved diffuse optical tomography: a preclinical test on rats,” J. Biomed. Opt. 21(2), 025004 (2016).
[Crossref] [PubMed]

Arridge, S.

Arridge, S. R.

S. R. Arridge and J. C. Schotland, “Optical tomography: forward and inverse problems,” Inverse Probl. 25(12), 123010 (2009).
[Crossref]

S. R. Arridge, “Optical tomography in medical imaging,” Inverse Probl. 15(2), R41–R93 (1999).
[Crossref]

Avrillier, S.

Balestreri, N.

Bargigia, I.

H. Wabnitz, D. R. Taubert, M. Mazurenka, O. Steinkellner, A. Jelzow, R. Macdonald, D. Milej, P. Sawosz, M. Kacprzak, A. Liebert, R. Cooper, J. Hebden, A. Pifferi, A. Farina, I. Bargigia, D. Contini, M. Caffini, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Torricelli, “Performance assessment of time-domain optical brain imagers, part 1: basic instrumental performance protocol,” J. Biomed. Opt. 19(8), 086010 (2014).
[Crossref] [PubMed]

Baribeau, F.

Bassi, A.

Bénazech-Lavoué, M.

Berger, M.

L. Di Sieno, G. Bettega, M. Berger, C. Hamou, M. Aribert, A. D. Mora, A. Puszka, H. Grateau, D. Contini, L. Hervé, J.-L. Coll, J.-M. Dinten, A. Pifferi, and A. Planat-Chrétien, “Toward noninvasive assessment of flap viability with time-resolved diffuse optical tomography: a preclinical test on rats,” J. Biomed. Opt. 21(2), 025004 (2016).
[Crossref] [PubMed]

Bérubé-Lauzière, Y.

Bettega, G.

L. Di Sieno, G. Bettega, M. Berger, C. Hamou, M. Aribert, A. D. Mora, A. Puszka, H. Grateau, D. Contini, L. Hervé, J.-L. Coll, J.-M. Dinten, A. Pifferi, and A. Planat-Chrétien, “Toward noninvasive assessment of flap viability with time-resolved diffuse optical tomography: a preclinical test on rats,” J. Biomed. Opt. 21(2), 025004 (2016).
[Crossref] [PubMed]

Bodnar, O.

Boso, G.

Botwicz, M.

Bouchard, J.-P.

Brooksby, B.

Caffini, M.

H. Wabnitz, D. R. Taubert, M. Mazurenka, O. Steinkellner, A. Jelzow, R. Macdonald, D. Milej, P. Sawosz, M. Kacprzak, A. Liebert, R. Cooper, J. Hebden, A. Pifferi, A. Farina, I. Bargigia, D. Contini, M. Caffini, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Torricelli, “Performance assessment of time-domain optical brain imagers, part 1: basic instrumental performance protocol,” J. Biomed. Opt. 19(8), 086010 (2014).
[Crossref] [PubMed]

Cassano, E.

Chance, B.

J. P. Culver, R. Choe, M. J. Holboke, L. Zubkov, T. Durduran, A. Slemp, V. Ntziachristos, B. Chance, and A. G. Yodh, “Three-dimensional diffuse optical tomography in the parallel plane transmission geometry: evaluation of a hybrid frequency domain/continuous wave clinical system for breast imaging,” Med. Phys. 30(2), 235–247 (2003).
[Crossref] [PubMed]

Chen, J.

Cheung, C.

J. P. Culver, T. Durduran, D. Furuya, C. Cheung, J. H. Greenberg, and A. G. Yodh, “Diffuse optical tomography of cerebral blood flow, oxygenation, and metabolism in rat during focal ischemia,” J. Cereb. Blood Flow Metab. 23(8), 911–924 (2003).
[Crossref] [PubMed]

Choe, R.

J. P. Culver, R. Choe, M. J. Holboke, L. Zubkov, T. Durduran, A. Slemp, V. Ntziachristos, B. Chance, and A. G. Yodh, “Three-dimensional diffuse optical tomography in the parallel plane transmission geometry: evaluation of a hybrid frequency domain/continuous wave clinical system for breast imaging,” Med. Phys. 30(2), 235–247 (2003).
[Crossref] [PubMed]

Coll, J.-L.

L. Di Sieno, G. Bettega, M. Berger, C. Hamou, M. Aribert, A. D. Mora, A. Puszka, H. Grateau, D. Contini, L. Hervé, J.-L. Coll, J.-M. Dinten, A. Pifferi, and A. Planat-Chrétien, “Toward noninvasive assessment of flap viability with time-resolved diffuse optical tomography: a preclinical test on rats,” J. Biomed. Opt. 21(2), 025004 (2016).
[Crossref] [PubMed]

Contini, D.

L. Di Sieno, G. Bettega, M. Berger, C. Hamou, M. Aribert, A. D. Mora, A. Puszka, H. Grateau, D. Contini, L. Hervé, J.-L. Coll, J.-M. Dinten, A. Pifferi, and A. Planat-Chrétien, “Toward noninvasive assessment of flap viability with time-resolved diffuse optical tomography: a preclinical test on rats,” J. Biomed. Opt. 21(2), 025004 (2016).
[Crossref] [PubMed]

A. Puszka, L. Di Sieno, A. D. Mora, A. Pifferi, D. Contini, A. Planat-Chrétien, A. Koenig, G. Boso, A. Tosi, L. Hervé, and J.-M. Dinten, “Spatial resolution in depth for time-resolved diffuse optical tomography using short source-detector separations,” Biomed. Opt. Express 6(1), 1–10 (2015).
[Crossref] [PubMed]

A. D. Mora, D. Contini, S. Arridge, F. Martelli, A. Tosi, G. Boso, A. Farina, T. Durduran, E. Martinenghi, A. Torricelli, and A. Pifferi, “Towards next-generation time-domain diffuse optics for extreme depth penetration and sensitivity,” Biomed. Opt. Express 6(5), 1749–1760 (2015).
[Crossref] [PubMed]

L. D. Sieno, A. D. Mora, G. Boso, A. Tosi, A. Pifferi, R. Cubeddu, and D. Contini, “Diffuse optics using a dual window fast-gated counter,” Appl. Opt. 53(31), 7394–7401 (2014).
[Crossref] [PubMed]

H. Wabnitz, D. R. Taubert, M. Mazurenka, O. Steinkellner, A. Jelzow, R. Macdonald, D. Milej, P. Sawosz, M. Kacprzak, A. Liebert, R. Cooper, J. Hebden, A. Pifferi, A. Farina, I. Bargigia, D. Contini, M. Caffini, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Torricelli, “Performance assessment of time-domain optical brain imagers, part 1: basic instrumental performance protocol,” J. Biomed. Opt. 19(8), 086010 (2014).
[Crossref] [PubMed]

H. Wabnitz, A. Jelzow, M. Mazurenka, O. Steinkellner, R. Macdonald, D. Milej, N. Żołek, M. Kacprzak, P. Sawosz, R. Maniewski, A. Liebert, S. Magazov, J. Hebden, F. Martelli, P. Di Ninni, G. Zaccanti, A. Torricelli, D. Contini, R. Re, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Pifferi, “Performance assessment of time-domain optical brain imagers, part 2: nEUROPt protocol,” J. Biomed. Opt. 19(8), 086012 (2014).
[Crossref] [PubMed]

F. Martelli, A. Pifferi, D. Contini, L. Spinelli, A. Torricelli, H. Wabnitz, R. Macdonald, A. Sassaroli, and G. Zaccanti, “Phantoms for diffuse optical imaging based on totally absorbing objects, part 1: Basic concepts,” J. Biomed. Opt. 18(6), 066014 (2013).
[Crossref] [PubMed]

A. Puszka, L. Di Sieno, A. D. Mora, A. Pifferi, D. Contini, G. Boso, A. Tosi, L. Hervé, A. Planat-Chrétien, A. Koenig, and J.-M. Dinten, “Time-resolved diffuse optical tomography using fast-gated single-photon avalanche diodes,” Biomed. Opt. Express 4(8), 1351–1365 (2013).
[Crossref] [PubMed]

A. Tosi, A. Dalla Mora, F. Zappa, A. Gulinatti, D. Contini, A. Pifferi, L. Spinelli, A. Torricelli, and R. Cubeddu, “Fast-gated single-photon counting technique widens dynamic range and speeds up acquisition time in time-resolved measurements,” Opt. Express 19(11), 10735–10746 (2011).
[Crossref] [PubMed]

A. Pifferi, A. Torricelli, L. Spinelli, D. Contini, R. Cubeddu, F. Martelli, G. Zaccanti, A. Tosi, A. Dalla Mora, F. Zappa, and S. Cova, “Time-Resolved Diffuse Reflectance Using Small Source-Detector Separation and Fast Single-Photon Gating,” Phys. Rev. Lett. 100(13), 138101 (2008).
[Crossref] [PubMed]

Cooper, R.

H. Wabnitz, D. R. Taubert, M. Mazurenka, O. Steinkellner, A. Jelzow, R. Macdonald, D. Milej, P. Sawosz, M. Kacprzak, A. Liebert, R. Cooper, J. Hebden, A. Pifferi, A. Farina, I. Bargigia, D. Contini, M. Caffini, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Torricelli, “Performance assessment of time-domain optical brain imagers, part 1: basic instrumental performance protocol,” J. Biomed. Opt. 19(8), 086010 (2014).
[Crossref] [PubMed]

Cova, S.

A. Pifferi, A. Torricelli, L. Spinelli, D. Contini, R. Cubeddu, F. Martelli, G. Zaccanti, A. Tosi, A. Dalla Mora, F. Zappa, and S. Cova, “Time-Resolved Diffuse Reflectance Using Small Source-Detector Separation and Fast Single-Photon Gating,” Phys. Rev. Lett. 100(13), 138101 (2008).
[Crossref] [PubMed]

Cubeddu, R.

H. Wabnitz, D. R. Taubert, M. Mazurenka, O. Steinkellner, A. Jelzow, R. Macdonald, D. Milej, P. Sawosz, M. Kacprzak, A. Liebert, R. Cooper, J. Hebden, A. Pifferi, A. Farina, I. Bargigia, D. Contini, M. Caffini, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Torricelli, “Performance assessment of time-domain optical brain imagers, part 1: basic instrumental performance protocol,” J. Biomed. Opt. 19(8), 086010 (2014).
[Crossref] [PubMed]

H. Wabnitz, A. Jelzow, M. Mazurenka, O. Steinkellner, R. Macdonald, D. Milej, N. Żołek, M. Kacprzak, P. Sawosz, R. Maniewski, A. Liebert, S. Magazov, J. Hebden, F. Martelli, P. Di Ninni, G. Zaccanti, A. Torricelli, D. Contini, R. Re, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Pifferi, “Performance assessment of time-domain optical brain imagers, part 2: nEUROPt protocol,” J. Biomed. Opt. 19(8), 086012 (2014).
[Crossref] [PubMed]

L. Spinelli, M. Botwicz, N. Zolek, M. Kacprzak, D. Milej, P. Sawosz, A. Liebert, U. Weigel, T. Durduran, F. Foschum, A. Kienle, F. Baribeau, S. Leclair, J.-P. Bouchard, I. Noiseux, P. Gallant, O. Mermut, A. Farina, A. Pifferi, A. Torricelli, R. Cubeddu, H.-C. Ho, M. Mazurenka, H. Wabnitz, K. Klauenberg, O. Bodnar, C. Elster, M. Bénazech-Lavoué, Y. Bérubé-Lauzière, F. Lesage, D. Khoptyar, A. A. Subash, S. Andersson-Engels, P. Di Ninni, F. Martelli, and G. Zaccanti, “Determination of reference values for optical properties of liquid phantoms based on Intralipid and India ink,” Biomed. Opt. Express 5(7), 2037–2053 (2014).
[Crossref] [PubMed]

G. Quarto, L. Spinelli, A. Pifferi, A. Torricelli, R. Cubeddu, F. Abbate, N. Balestreri, S. Menna, E. Cassano, and P. Taroni, “Estimate of tissue composition in malignant and benign breast lesions by time-domain optical mammography,” Biomed. Opt. Express 5(10), 3684–3698 (2014).
[Crossref] [PubMed]

L. D. Sieno, A. D. Mora, G. Boso, A. Tosi, A. Pifferi, R. Cubeddu, and D. Contini, “Diffuse optics using a dual window fast-gated counter,” Appl. Opt. 53(31), 7394–7401 (2014).
[Crossref] [PubMed]

A. Pifferi, A. Farina, A. Torricelli, G. Quarto, R. Cubeddu, and P. Taroni, “Review: Time-domain broadband near infrared spectroscopy of the female breast: a focused review from basic principles to future perspectives,” J. Near Infrared Spectrosc. 20(1), 223–235 (2012).
[Crossref]

A. Tosi, A. Dalla Mora, F. Zappa, A. Gulinatti, D. Contini, A. Pifferi, L. Spinelli, A. Torricelli, and R. Cubeddu, “Fast-gated single-photon counting technique widens dynamic range and speeds up acquisition time in time-resolved measurements,” Opt. Express 19(11), 10735–10746 (2011).
[Crossref] [PubMed]

A. Pifferi, A. Torricelli, L. Spinelli, D. Contini, R. Cubeddu, F. Martelli, G. Zaccanti, A. Tosi, A. Dalla Mora, F. Zappa, and S. Cova, “Time-Resolved Diffuse Reflectance Using Small Source-Detector Separation and Fast Single-Photon Gating,” Phys. Rev. Lett. 100(13), 138101 (2008).
[Crossref] [PubMed]

A. Torricelli, A. Pifferi, L. Spinelli, R. Cubeddu, F. Martelli, S. Del Bianco, and G. Zaccanti, “Time-Resolved Reflectance At Null Source-Detector Separation: Improving Contrast and Resolution In Diffuse Optical Imaging,” Phys. Rev. Lett. 95(7), 078101 (2005).
[Crossref] [PubMed]

A. Pifferi, A. Torricelli, A. Bassi, P. Taroni, R. Cubeddu, H. Wabnitz, D. Grosenick, M. Möller, R. Macdonald, J. Swartling, T. Svensson, S. Andersson-Engels, R. L. P. van Veen, H. J. C. M. Sterenborg, J.-M. Tualle, H. L. Nghiem, S. Avrillier, M. Whelan, and H. Stamm, “Performance assessment of photon migration instruments: the MEDPHOT protocol,” Appl. Opt. 44(11), 2104–2114 (2005).
[Crossref] [PubMed]

Culver, J. P.

A. T. Eggebrecht, S. L. Ferradal, A. Robichaux-Viehoever, M. S. Hassanpour, H. Dehghani, A. Z. Snyder, T. Hershey, and J. P. Culver, “Mapping distributed brain function and networks with diffuse optical tomography,” Nat. Photonics 8(6), 448–454 (2014).
[Crossref] [PubMed]

J. P. Culver, T. Durduran, D. Furuya, C. Cheung, J. H. Greenberg, and A. G. Yodh, “Diffuse optical tomography of cerebral blood flow, oxygenation, and metabolism in rat during focal ischemia,” J. Cereb. Blood Flow Metab. 23(8), 911–924 (2003).
[Crossref] [PubMed]

J. P. Culver, R. Choe, M. J. Holboke, L. Zubkov, T. Durduran, A. Slemp, V. Ntziachristos, B. Chance, and A. G. Yodh, “Three-dimensional diffuse optical tomography in the parallel plane transmission geometry: evaluation of a hybrid frequency domain/continuous wave clinical system for breast imaging,” Med. Phys. 30(2), 235–247 (2003).
[Crossref] [PubMed]

D’Andrea, C.

N. Ducros, C. D’Andrea, A. Bassi, G. Valentini, and S. Arridge, “A virtual source pattern method for fluorescence tomography with structured light,” Phys. Med. Biol. 57(12), 3811–3832 (2012).
[Crossref] [PubMed]

C. D’Andrea, N. Ducros, A. Bassi, S. Arridge, and G. Valentini, “Fast 3D optical reconstruction in turbid media using spatially modulated light,” Biomed. Opt. Express 1(2), 471–481 (2010).
[Crossref] [PubMed]

Dalla Mora, A.

G. Boso, A. Dalla Mora, A. Della Frera, and A. Tosi, “Fast-gating of single-photon avalanche diodes with 200ps transitions and 30ps timing jitter,” Sens. Actuators A Phys. 191, 61–67 (2013).
[Crossref]

A. Tosi, A. Dalla Mora, F. Zappa, A. Gulinatti, D. Contini, A. Pifferi, L. Spinelli, A. Torricelli, and R. Cubeddu, “Fast-gated single-photon counting technique widens dynamic range and speeds up acquisition time in time-resolved measurements,” Opt. Express 19(11), 10735–10746 (2011).
[Crossref] [PubMed]

A. Pifferi, A. Torricelli, L. Spinelli, D. Contini, R. Cubeddu, F. Martelli, G. Zaccanti, A. Tosi, A. Dalla Mora, F. Zappa, and S. Cova, “Time-Resolved Diffuse Reflectance Using Small Source-Detector Separation and Fast Single-Photon Gating,” Phys. Rev. Lett. 100(13), 138101 (2008).
[Crossref] [PubMed]

Davis, S. C.

B. W. Pogue, S. C. Davis, F. Leblond, M. A. Mastanduno, H. Dehghani, and K. D. Paulsen, “Implicit and explicit prior information in near-infrared spectral imaging: accuracy, quantification and diagnostic value,” Philos Trans A 369(1955), 4531–4557 (2011).
[Crossref] [PubMed]

S. C. Davis, B. W. Pogue, H. Dehghani, and K. D. Paulsen, “Contrast-detail analysis characterizing diffuse optical fluorescence tomography image reconstruction,” J. Biomed. Opt. 10(5), 050501 (2005).
[Crossref] [PubMed]

Dehghani, H.

A. T. Eggebrecht, S. L. Ferradal, A. Robichaux-Viehoever, M. S. Hassanpour, H. Dehghani, A. Z. Snyder, T. Hershey, and J. P. Culver, “Mapping distributed brain function and networks with diffuse optical tomography,” Nat. Photonics 8(6), 448–454 (2014).
[Crossref] [PubMed]

B. W. Pogue, S. C. Davis, F. Leblond, M. A. Mastanduno, H. Dehghani, and K. D. Paulsen, “Implicit and explicit prior information in near-infrared spectral imaging: accuracy, quantification and diagnostic value,” Philos Trans A 369(1955), 4531–4557 (2011).
[Crossref] [PubMed]

S. C. Davis, B. W. Pogue, H. Dehghani, and K. D. Paulsen, “Contrast-detail analysis characterizing diffuse optical fluorescence tomography image reconstruction,” J. Biomed. Opt. 10(5), 050501 (2005).
[Crossref] [PubMed]

S. Srinivasan, B. W. Pogue, H. Dehghani, S. Jiang, X. Song, and K. D. Paulsen, “Improved quantification of small objects in near-infrared diffuse optical tomography,” J. Biomed. Opt. 9(6), 1161–1171 (2004).
[Crossref] [PubMed]

H. Dehghani, B. W. Pogue, J. Shudong, B. Brooksby, and K. D. Paulsen, “Three-dimensional optical tomography: resolution in small-object imaging,” Appl. Opt. 42(16), 3117–3128 (2003).
[Crossref] [PubMed]

Del Bianco, S.

A. Torricelli, A. Pifferi, L. Spinelli, R. Cubeddu, F. Martelli, S. Del Bianco, and G. Zaccanti, “Time-Resolved Reflectance At Null Source-Detector Separation: Improving Contrast and Resolution In Diffuse Optical Imaging,” Phys. Rev. Lett. 95(7), 078101 (2005).
[Crossref] [PubMed]

Della Frera, A.

G. Boso, A. Dalla Mora, A. Della Frera, and A. Tosi, “Fast-gating of single-photon avalanche diodes with 200ps transitions and 30ps timing jitter,” Sens. Actuators A Phys. 191, 61–67 (2013).
[Crossref]

Derouard, J.

Di Ninni, P.

Di Sieno, L.

Dinten, J.-M.

L. Di Sieno, G. Bettega, M. Berger, C. Hamou, M. Aribert, A. D. Mora, A. Puszka, H. Grateau, D. Contini, L. Hervé, J.-L. Coll, J.-M. Dinten, A. Pifferi, and A. Planat-Chrétien, “Toward noninvasive assessment of flap viability with time-resolved diffuse optical tomography: a preclinical test on rats,” J. Biomed. Opt. 21(2), 025004 (2016).
[Crossref] [PubMed]

A. Puszka, L. Di Sieno, A. D. Mora, A. Pifferi, D. Contini, A. Planat-Chrétien, A. Koenig, G. Boso, A. Tosi, L. Hervé, and J.-M. Dinten, “Spatial resolution in depth for time-resolved diffuse optical tomography using short source-detector separations,” Biomed. Opt. Express 6(1), 1–10 (2015).
[Crossref] [PubMed]

A. Puszka, L. Hervé, A. Planat-Chrétien, A. Koenig, J. Derouard, and J.-M. Dinten, “Time-domain reflectance diffuse optical tomography with Mellin-Laplace transform for experimental detection and depth localization of a single absorbing inclusion,” Biomed. Opt. Express 4(4), 569–583 (2013).
[Crossref] [PubMed]

A. Puszka, L. Di Sieno, A. D. Mora, A. Pifferi, D. Contini, G. Boso, A. Tosi, L. Hervé, A. Planat-Chrétien, A. Koenig, and J.-M. Dinten, “Time-resolved diffuse optical tomography using fast-gated single-photon avalanche diodes,” Biomed. Opt. Express 4(8), 1351–1365 (2013).
[Crossref] [PubMed]

L. Hervé, A. Puszka, A. Planat-Chrétien, and J.-M. Dinten, “Time-domain diffuse optical tomography processing by using the Mellin-Laplace transform,” Appl. Opt. 51(25), 5978–5988 (2012).
[Crossref] [PubMed]

Ducros, N.

N. Ducros, C. D’Andrea, A. Bassi, G. Valentini, and S. Arridge, “A virtual source pattern method for fluorescence tomography with structured light,” Phys. Med. Biol. 57(12), 3811–3832 (2012).
[Crossref] [PubMed]

C. D’Andrea, N. Ducros, A. Bassi, S. Arridge, and G. Valentini, “Fast 3D optical reconstruction in turbid media using spatially modulated light,” Biomed. Opt. Express 1(2), 471–481 (2010).
[Crossref] [PubMed]

Durduran, T.

A. D. Mora, D. Contini, S. Arridge, F. Martelli, A. Tosi, G. Boso, A. Farina, T. Durduran, E. Martinenghi, A. Torricelli, and A. Pifferi, “Towards next-generation time-domain diffuse optics for extreme depth penetration and sensitivity,” Biomed. Opt. Express 6(5), 1749–1760 (2015).
[Crossref] [PubMed]

L. Spinelli, M. Botwicz, N. Zolek, M. Kacprzak, D. Milej, P. Sawosz, A. Liebert, U. Weigel, T. Durduran, F. Foschum, A. Kienle, F. Baribeau, S. Leclair, J.-P. Bouchard, I. Noiseux, P. Gallant, O. Mermut, A. Farina, A. Pifferi, A. Torricelli, R. Cubeddu, H.-C. Ho, M. Mazurenka, H. Wabnitz, K. Klauenberg, O. Bodnar, C. Elster, M. Bénazech-Lavoué, Y. Bérubé-Lauzière, F. Lesage, D. Khoptyar, A. A. Subash, S. Andersson-Engels, P. Di Ninni, F. Martelli, and G. Zaccanti, “Determination of reference values for optical properties of liquid phantoms based on Intralipid and India ink,” Biomed. Opt. Express 5(7), 2037–2053 (2014).
[Crossref] [PubMed]

J. P. Culver, R. Choe, M. J. Holboke, L. Zubkov, T. Durduran, A. Slemp, V. Ntziachristos, B. Chance, and A. G. Yodh, “Three-dimensional diffuse optical tomography in the parallel plane transmission geometry: evaluation of a hybrid frequency domain/continuous wave clinical system for breast imaging,” Med. Phys. 30(2), 235–247 (2003).
[Crossref] [PubMed]

J. P. Culver, T. Durduran, D. Furuya, C. Cheung, J. H. Greenberg, and A. G. Yodh, “Diffuse optical tomography of cerebral blood flow, oxygenation, and metabolism in rat during focal ischemia,” J. Cereb. Blood Flow Metab. 23(8), 911–924 (2003).
[Crossref] [PubMed]

Eggebrecht, A. T.

A. T. Eggebrecht, S. L. Ferradal, A. Robichaux-Viehoever, M. S. Hassanpour, H. Dehghani, A. Z. Snyder, T. Hershey, and J. P. Culver, “Mapping distributed brain function and networks with diffuse optical tomography,” Nat. Photonics 8(6), 448–454 (2014).
[Crossref] [PubMed]

Elster, C.

Farina, A.

A. D. Mora, D. Contini, S. Arridge, F. Martelli, A. Tosi, G. Boso, A. Farina, T. Durduran, E. Martinenghi, A. Torricelli, and A. Pifferi, “Towards next-generation time-domain diffuse optics for extreme depth penetration and sensitivity,” Biomed. Opt. Express 6(5), 1749–1760 (2015).
[Crossref] [PubMed]

L. Spinelli, M. Botwicz, N. Zolek, M. Kacprzak, D. Milej, P. Sawosz, A. Liebert, U. Weigel, T. Durduran, F. Foschum, A. Kienle, F. Baribeau, S. Leclair, J.-P. Bouchard, I. Noiseux, P. Gallant, O. Mermut, A. Farina, A. Pifferi, A. Torricelli, R. Cubeddu, H.-C. Ho, M. Mazurenka, H. Wabnitz, K. Klauenberg, O. Bodnar, C. Elster, M. Bénazech-Lavoué, Y. Bérubé-Lauzière, F. Lesage, D. Khoptyar, A. A. Subash, S. Andersson-Engels, P. Di Ninni, F. Martelli, and G. Zaccanti, “Determination of reference values for optical properties of liquid phantoms based on Intralipid and India ink,” Biomed. Opt. Express 5(7), 2037–2053 (2014).
[Crossref] [PubMed]

H. Wabnitz, D. R. Taubert, M. Mazurenka, O. Steinkellner, A. Jelzow, R. Macdonald, D. Milej, P. Sawosz, M. Kacprzak, A. Liebert, R. Cooper, J. Hebden, A. Pifferi, A. Farina, I. Bargigia, D. Contini, M. Caffini, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Torricelli, “Performance assessment of time-domain optical brain imagers, part 1: basic instrumental performance protocol,” J. Biomed. Opt. 19(8), 086010 (2014).
[Crossref] [PubMed]

A. Pifferi, A. Farina, A. Torricelli, G. Quarto, R. Cubeddu, and P. Taroni, “Review: Time-domain broadband near infrared spectroscopy of the female breast: a focused review from basic principles to future perspectives,” J. Near Infrared Spectrosc. 20(1), 223–235 (2012).
[Crossref]

Fenoglio, A.

P.-Y. Lin, K. Hagan, A. Fenoglio, P. E. Grant, and M. A. Franceschini, “Reduced cerebral blood flow and oxygen metabolism in extremely preterm neonates with low-grade germinal matrix- intraventricular hemorrhage,” Sci. Rep. 6, 25903 (2016).
[Crossref] [PubMed]

Ferradal, S. L.

A. T. Eggebrecht, S. L. Ferradal, A. Robichaux-Viehoever, M. S. Hassanpour, H. Dehghani, A. Z. Snyder, T. Hershey, and J. P. Culver, “Mapping distributed brain function and networks with diffuse optical tomography,” Nat. Photonics 8(6), 448–454 (2014).
[Crossref] [PubMed]

Foschum, F.

Franceschini, M. A.

P.-Y. Lin, K. Hagan, A. Fenoglio, P. E. Grant, and M. A. Franceschini, “Reduced cerebral blood flow and oxygen metabolism in extremely preterm neonates with low-grade germinal matrix- intraventricular hemorrhage,” Sci. Rep. 6, 25903 (2016).
[Crossref] [PubMed]

Furuya, D.

J. P. Culver, T. Durduran, D. Furuya, C. Cheung, J. H. Greenberg, and A. G. Yodh, “Diffuse optical tomography of cerebral blood flow, oxygenation, and metabolism in rat during focal ischemia,” J. Cereb. Blood Flow Metab. 23(8), 911–924 (2003).
[Crossref] [PubMed]

Gallant, P.

Gerety, E. D.

Grant, P. E.

P.-Y. Lin, K. Hagan, A. Fenoglio, P. E. Grant, and M. A. Franceschini, “Reduced cerebral blood flow and oxygen metabolism in extremely preterm neonates with low-grade germinal matrix- intraventricular hemorrhage,” Sci. Rep. 6, 25903 (2016).
[Crossref] [PubMed]

Grateau, H.

L. Di Sieno, G. Bettega, M. Berger, C. Hamou, M. Aribert, A. D. Mora, A. Puszka, H. Grateau, D. Contini, L. Hervé, J.-L. Coll, J.-M. Dinten, A. Pifferi, and A. Planat-Chrétien, “Toward noninvasive assessment of flap viability with time-resolved diffuse optical tomography: a preclinical test on rats,” J. Biomed. Opt. 21(2), 025004 (2016).
[Crossref] [PubMed]

Greenberg, J. H.

J. P. Culver, T. Durduran, D. Furuya, C. Cheung, J. H. Greenberg, and A. G. Yodh, “Diffuse optical tomography of cerebral blood flow, oxygenation, and metabolism in rat during focal ischemia,” J. Cereb. Blood Flow Metab. 23(8), 911–924 (2003).
[Crossref] [PubMed]

Grosenick, D.

Gulinatti, A.

Hagan, K.

P.-Y. Lin, K. Hagan, A. Fenoglio, P. E. Grant, and M. A. Franceschini, “Reduced cerebral blood flow and oxygen metabolism in extremely preterm neonates with low-grade germinal matrix- intraventricular hemorrhage,” Sci. Rep. 6, 25903 (2016).
[Crossref] [PubMed]

Hamou, C.

L. Di Sieno, G. Bettega, M. Berger, C. Hamou, M. Aribert, A. D. Mora, A. Puszka, H. Grateau, D. Contini, L. Hervé, J.-L. Coll, J.-M. Dinten, A. Pifferi, and A. Planat-Chrétien, “Toward noninvasive assessment of flap viability with time-resolved diffuse optical tomography: a preclinical test on rats,” J. Biomed. Opt. 21(2), 025004 (2016).
[Crossref] [PubMed]

Hassanpour, M. S.

A. T. Eggebrecht, S. L. Ferradal, A. Robichaux-Viehoever, M. S. Hassanpour, H. Dehghani, A. Z. Snyder, T. Hershey, and J. P. Culver, “Mapping distributed brain function and networks with diffuse optical tomography,” Nat. Photonics 8(6), 448–454 (2014).
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Hebden, J.

H. Wabnitz, D. R. Taubert, M. Mazurenka, O. Steinkellner, A. Jelzow, R. Macdonald, D. Milej, P. Sawosz, M. Kacprzak, A. Liebert, R. Cooper, J. Hebden, A. Pifferi, A. Farina, I. Bargigia, D. Contini, M. Caffini, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Torricelli, “Performance assessment of time-domain optical brain imagers, part 1: basic instrumental performance protocol,” J. Biomed. Opt. 19(8), 086010 (2014).
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H. Wabnitz, A. Jelzow, M. Mazurenka, O. Steinkellner, R. Macdonald, D. Milej, N. Żołek, M. Kacprzak, P. Sawosz, R. Maniewski, A. Liebert, S. Magazov, J. Hebden, F. Martelli, P. Di Ninni, G. Zaccanti, A. Torricelli, D. Contini, R. Re, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Pifferi, “Performance assessment of time-domain optical brain imagers, part 2: nEUROPt protocol,” J. Biomed. Opt. 19(8), 086012 (2014).
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Hershey, T.

A. T. Eggebrecht, S. L. Ferradal, A. Robichaux-Viehoever, M. S. Hassanpour, H. Dehghani, A. Z. Snyder, T. Hershey, and J. P. Culver, “Mapping distributed brain function and networks with diffuse optical tomography,” Nat. Photonics 8(6), 448–454 (2014).
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Hervé, L.

L. Di Sieno, G. Bettega, M. Berger, C. Hamou, M. Aribert, A. D. Mora, A. Puszka, H. Grateau, D. Contini, L. Hervé, J.-L. Coll, J.-M. Dinten, A. Pifferi, and A. Planat-Chrétien, “Toward noninvasive assessment of flap viability with time-resolved diffuse optical tomography: a preclinical test on rats,” J. Biomed. Opt. 21(2), 025004 (2016).
[Crossref] [PubMed]

A. Puszka, L. Di Sieno, A. D. Mora, A. Pifferi, D. Contini, A. Planat-Chrétien, A. Koenig, G. Boso, A. Tosi, L. Hervé, and J.-M. Dinten, “Spatial resolution in depth for time-resolved diffuse optical tomography using short source-detector separations,” Biomed. Opt. Express 6(1), 1–10 (2015).
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A. Puszka, L. Hervé, A. Planat-Chrétien, A. Koenig, J. Derouard, and J.-M. Dinten, “Time-domain reflectance diffuse optical tomography with Mellin-Laplace transform for experimental detection and depth localization of a single absorbing inclusion,” Biomed. Opt. Express 4(4), 569–583 (2013).
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A. Puszka, L. Di Sieno, A. D. Mora, A. Pifferi, D. Contini, G. Boso, A. Tosi, L. Hervé, A. Planat-Chrétien, A. Koenig, and J.-M. Dinten, “Time-resolved diffuse optical tomography using fast-gated single-photon avalanche diodes,” Biomed. Opt. Express 4(8), 1351–1365 (2013).
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L. Hervé, A. Puszka, A. Planat-Chrétien, and J.-M. Dinten, “Time-domain diffuse optical tomography processing by using the Mellin-Laplace transform,” Appl. Opt. 51(25), 5978–5988 (2012).
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Ho, H.-C.

Holboke, M. J.

J. P. Culver, R. Choe, M. J. Holboke, L. Zubkov, T. Durduran, A. Slemp, V. Ntziachristos, B. Chance, and A. G. Yodh, “Three-dimensional diffuse optical tomography in the parallel plane transmission geometry: evaluation of a hybrid frequency domain/continuous wave clinical system for breast imaging,” Med. Phys. 30(2), 235–247 (2003).
[Crossref] [PubMed]

Intes, X.

Jelzow, A.

H. Wabnitz, A. Jelzow, M. Mazurenka, O. Steinkellner, R. Macdonald, D. Milej, N. Żołek, M. Kacprzak, P. Sawosz, R. Maniewski, A. Liebert, S. Magazov, J. Hebden, F. Martelli, P. Di Ninni, G. Zaccanti, A. Torricelli, D. Contini, R. Re, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Pifferi, “Performance assessment of time-domain optical brain imagers, part 2: nEUROPt protocol,” J. Biomed. Opt. 19(8), 086012 (2014).
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H. Wabnitz, D. R. Taubert, M. Mazurenka, O. Steinkellner, A. Jelzow, R. Macdonald, D. Milej, P. Sawosz, M. Kacprzak, A. Liebert, R. Cooper, J. Hebden, A. Pifferi, A. Farina, I. Bargigia, D. Contini, M. Caffini, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Torricelli, “Performance assessment of time-domain optical brain imagers, part 1: basic instrumental performance protocol,” J. Biomed. Opt. 19(8), 086010 (2014).
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Jiang, H.

Z. Yuan, Q. Zhang, E. S. Sobel, and H. Jiang, “Tomographic x-ray-guided three-dimensional diffuse optical tomography of osteoarthritis in the finger joints,” J. Biomed. Opt. 13(4), 044006 (2008).
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Jiang, S.

S. Srinivasan, B. W. Pogue, H. Dehghani, S. Jiang, X. Song, and K. D. Paulsen, “Improved quantification of small objects in near-infrared diffuse optical tomography,” J. Biomed. Opt. 9(6), 1161–1171 (2004).
[Crossref] [PubMed]

T. O. McBride, B. W. Pogue, S. Jiang, U. L. Osterberg, K. D. Paulsen, and S. P. Poplack, “Initial studies of in vivo absorbing and scattering heterogeneity in near-infrared tomographic breast imaging,” Opt. Lett. 26(11), 822–824 (2001).
[Crossref] [PubMed]

Kacprzak, M.

L. Spinelli, M. Botwicz, N. Zolek, M. Kacprzak, D. Milej, P. Sawosz, A. Liebert, U. Weigel, T. Durduran, F. Foschum, A. Kienle, F. Baribeau, S. Leclair, J.-P. Bouchard, I. Noiseux, P. Gallant, O. Mermut, A. Farina, A. Pifferi, A. Torricelli, R. Cubeddu, H.-C. Ho, M. Mazurenka, H. Wabnitz, K. Klauenberg, O. Bodnar, C. Elster, M. Bénazech-Lavoué, Y. Bérubé-Lauzière, F. Lesage, D. Khoptyar, A. A. Subash, S. Andersson-Engels, P. Di Ninni, F. Martelli, and G. Zaccanti, “Determination of reference values for optical properties of liquid phantoms based on Intralipid and India ink,” Biomed. Opt. Express 5(7), 2037–2053 (2014).
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H. Wabnitz, D. R. Taubert, M. Mazurenka, O. Steinkellner, A. Jelzow, R. Macdonald, D. Milej, P. Sawosz, M. Kacprzak, A. Liebert, R. Cooper, J. Hebden, A. Pifferi, A. Farina, I. Bargigia, D. Contini, M. Caffini, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Torricelli, “Performance assessment of time-domain optical brain imagers, part 1: basic instrumental performance protocol,” J. Biomed. Opt. 19(8), 086010 (2014).
[Crossref] [PubMed]

H. Wabnitz, A. Jelzow, M. Mazurenka, O. Steinkellner, R. Macdonald, D. Milej, N. Żołek, M. Kacprzak, P. Sawosz, R. Maniewski, A. Liebert, S. Magazov, J. Hebden, F. Martelli, P. Di Ninni, G. Zaccanti, A. Torricelli, D. Contini, R. Re, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Pifferi, “Performance assessment of time-domain optical brain imagers, part 2: nEUROPt protocol,” J. Biomed. Opt. 19(8), 086012 (2014).
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Khoptyar, D.

Kienle, A.

Klauenberg, K.

Koenig, A.

Leblond, F.

B. W. Pogue, S. C. Davis, F. Leblond, M. A. Mastanduno, H. Dehghani, and K. D. Paulsen, “Implicit and explicit prior information in near-infrared spectral imaging: accuracy, quantification and diagnostic value,” Philos Trans A 369(1955), 4531–4557 (2011).
[Crossref] [PubMed]

Leclair, S.

Lesage, F.

Liebert, A.

L. Spinelli, M. Botwicz, N. Zolek, M. Kacprzak, D. Milej, P. Sawosz, A. Liebert, U. Weigel, T. Durduran, F. Foschum, A. Kienle, F. Baribeau, S. Leclair, J.-P. Bouchard, I. Noiseux, P. Gallant, O. Mermut, A. Farina, A. Pifferi, A. Torricelli, R. Cubeddu, H.-C. Ho, M. Mazurenka, H. Wabnitz, K. Klauenberg, O. Bodnar, C. Elster, M. Bénazech-Lavoué, Y. Bérubé-Lauzière, F. Lesage, D. Khoptyar, A. A. Subash, S. Andersson-Engels, P. Di Ninni, F. Martelli, and G. Zaccanti, “Determination of reference values for optical properties of liquid phantoms based on Intralipid and India ink,” Biomed. Opt. Express 5(7), 2037–2053 (2014).
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H. Wabnitz, A. Jelzow, M. Mazurenka, O. Steinkellner, R. Macdonald, D. Milej, N. Żołek, M. Kacprzak, P. Sawosz, R. Maniewski, A. Liebert, S. Magazov, J. Hebden, F. Martelli, P. Di Ninni, G. Zaccanti, A. Torricelli, D. Contini, R. Re, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Pifferi, “Performance assessment of time-domain optical brain imagers, part 2: nEUROPt protocol,” J. Biomed. Opt. 19(8), 086012 (2014).
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H. Wabnitz, D. R. Taubert, M. Mazurenka, O. Steinkellner, A. Jelzow, R. Macdonald, D. Milej, P. Sawosz, M. Kacprzak, A. Liebert, R. Cooper, J. Hebden, A. Pifferi, A. Farina, I. Bargigia, D. Contini, M. Caffini, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Torricelli, “Performance assessment of time-domain optical brain imagers, part 1: basic instrumental performance protocol,” J. Biomed. Opt. 19(8), 086010 (2014).
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Lin, P.-Y.

P.-Y. Lin, K. Hagan, A. Fenoglio, P. E. Grant, and M. A. Franceschini, “Reduced cerebral blood flow and oxygen metabolism in extremely preterm neonates with low-grade germinal matrix- intraventricular hemorrhage,” Sci. Rep. 6, 25903 (2016).
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Macdonald, R.

H. Wabnitz, D. R. Taubert, M. Mazurenka, O. Steinkellner, A. Jelzow, R. Macdonald, D. Milej, P. Sawosz, M. Kacprzak, A. Liebert, R. Cooper, J. Hebden, A. Pifferi, A. Farina, I. Bargigia, D. Contini, M. Caffini, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Torricelli, “Performance assessment of time-domain optical brain imagers, part 1: basic instrumental performance protocol,” J. Biomed. Opt. 19(8), 086010 (2014).
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H. Wabnitz, A. Jelzow, M. Mazurenka, O. Steinkellner, R. Macdonald, D. Milej, N. Żołek, M. Kacprzak, P. Sawosz, R. Maniewski, A. Liebert, S. Magazov, J. Hebden, F. Martelli, P. Di Ninni, G. Zaccanti, A. Torricelli, D. Contini, R. Re, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Pifferi, “Performance assessment of time-domain optical brain imagers, part 2: nEUROPt protocol,” J. Biomed. Opt. 19(8), 086012 (2014).
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F. Martelli, A. Pifferi, D. Contini, L. Spinelli, A. Torricelli, H. Wabnitz, R. Macdonald, A. Sassaroli, and G. Zaccanti, “Phantoms for diffuse optical imaging based on totally absorbing objects, part 1: Basic concepts,” J. Biomed. Opt. 18(6), 066014 (2013).
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A. Pifferi, A. Torricelli, A. Bassi, P. Taroni, R. Cubeddu, H. Wabnitz, D. Grosenick, M. Möller, R. Macdonald, J. Swartling, T. Svensson, S. Andersson-Engels, R. L. P. van Veen, H. J. C. M. Sterenborg, J.-M. Tualle, H. L. Nghiem, S. Avrillier, M. Whelan, and H. Stamm, “Performance assessment of photon migration instruments: the MEDPHOT protocol,” Appl. Opt. 44(11), 2104–2114 (2005).
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Magazov, S.

H. Wabnitz, A. Jelzow, M. Mazurenka, O. Steinkellner, R. Macdonald, D. Milej, N. Żołek, M. Kacprzak, P. Sawosz, R. Maniewski, A. Liebert, S. Magazov, J. Hebden, F. Martelli, P. Di Ninni, G. Zaccanti, A. Torricelli, D. Contini, R. Re, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Pifferi, “Performance assessment of time-domain optical brain imagers, part 2: nEUROPt protocol,” J. Biomed. Opt. 19(8), 086012 (2014).
[Crossref] [PubMed]

Maniewski, R.

H. Wabnitz, A. Jelzow, M. Mazurenka, O. Steinkellner, R. Macdonald, D. Milej, N. Żołek, M. Kacprzak, P. Sawosz, R. Maniewski, A. Liebert, S. Magazov, J. Hebden, F. Martelli, P. Di Ninni, G. Zaccanti, A. Torricelli, D. Contini, R. Re, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Pifferi, “Performance assessment of time-domain optical brain imagers, part 2: nEUROPt protocol,” J. Biomed. Opt. 19(8), 086012 (2014).
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Martelli, F.

A. D. Mora, D. Contini, S. Arridge, F. Martelli, A. Tosi, G. Boso, A. Farina, T. Durduran, E. Martinenghi, A. Torricelli, and A. Pifferi, “Towards next-generation time-domain diffuse optics for extreme depth penetration and sensitivity,” Biomed. Opt. Express 6(5), 1749–1760 (2015).
[Crossref] [PubMed]

H. Wabnitz, A. Jelzow, M. Mazurenka, O. Steinkellner, R. Macdonald, D. Milej, N. Żołek, M. Kacprzak, P. Sawosz, R. Maniewski, A. Liebert, S. Magazov, J. Hebden, F. Martelli, P. Di Ninni, G. Zaccanti, A. Torricelli, D. Contini, R. Re, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Pifferi, “Performance assessment of time-domain optical brain imagers, part 2: nEUROPt protocol,” J. Biomed. Opt. 19(8), 086012 (2014).
[Crossref] [PubMed]

L. Spinelli, M. Botwicz, N. Zolek, M. Kacprzak, D. Milej, P. Sawosz, A. Liebert, U. Weigel, T. Durduran, F. Foschum, A. Kienle, F. Baribeau, S. Leclair, J.-P. Bouchard, I. Noiseux, P. Gallant, O. Mermut, A. Farina, A. Pifferi, A. Torricelli, R. Cubeddu, H.-C. Ho, M. Mazurenka, H. Wabnitz, K. Klauenberg, O. Bodnar, C. Elster, M. Bénazech-Lavoué, Y. Bérubé-Lauzière, F. Lesage, D. Khoptyar, A. A. Subash, S. Andersson-Engels, P. Di Ninni, F. Martelli, and G. Zaccanti, “Determination of reference values for optical properties of liquid phantoms based on Intralipid and India ink,” Biomed. Opt. Express 5(7), 2037–2053 (2014).
[Crossref] [PubMed]

F. Martelli, A. Pifferi, D. Contini, L. Spinelli, A. Torricelli, H. Wabnitz, R. Macdonald, A. Sassaroli, and G. Zaccanti, “Phantoms for diffuse optical imaging based on totally absorbing objects, part 1: Basic concepts,” J. Biomed. Opt. 18(6), 066014 (2013).
[Crossref] [PubMed]

A. Pifferi, A. Torricelli, L. Spinelli, D. Contini, R. Cubeddu, F. Martelli, G. Zaccanti, A. Tosi, A. Dalla Mora, F. Zappa, and S. Cova, “Time-Resolved Diffuse Reflectance Using Small Source-Detector Separation and Fast Single-Photon Gating,” Phys. Rev. Lett. 100(13), 138101 (2008).
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A. Torricelli, A. Pifferi, L. Spinelli, R. Cubeddu, F. Martelli, S. Del Bianco, and G. Zaccanti, “Time-Resolved Reflectance At Null Source-Detector Separation: Improving Contrast and Resolution In Diffuse Optical Imaging,” Phys. Rev. Lett. 95(7), 078101 (2005).
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Martinenghi, E.

Mastanduno, M. A.

B. W. Pogue, S. C. Davis, F. Leblond, M. A. Mastanduno, H. Dehghani, and K. D. Paulsen, “Implicit and explicit prior information in near-infrared spectral imaging: accuracy, quantification and diagnostic value,” Philos Trans A 369(1955), 4531–4557 (2011).
[Crossref] [PubMed]

Mazurenka, M.

H. Wabnitz, A. Jelzow, M. Mazurenka, O. Steinkellner, R. Macdonald, D. Milej, N. Żołek, M. Kacprzak, P. Sawosz, R. Maniewski, A. Liebert, S. Magazov, J. Hebden, F. Martelli, P. Di Ninni, G. Zaccanti, A. Torricelli, D. Contini, R. Re, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Pifferi, “Performance assessment of time-domain optical brain imagers, part 2: nEUROPt protocol,” J. Biomed. Opt. 19(8), 086012 (2014).
[Crossref] [PubMed]

H. Wabnitz, D. R. Taubert, M. Mazurenka, O. Steinkellner, A. Jelzow, R. Macdonald, D. Milej, P. Sawosz, M. Kacprzak, A. Liebert, R. Cooper, J. Hebden, A. Pifferi, A. Farina, I. Bargigia, D. Contini, M. Caffini, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Torricelli, “Performance assessment of time-domain optical brain imagers, part 1: basic instrumental performance protocol,” J. Biomed. Opt. 19(8), 086010 (2014).
[Crossref] [PubMed]

L. Spinelli, M. Botwicz, N. Zolek, M. Kacprzak, D. Milej, P. Sawosz, A. Liebert, U. Weigel, T. Durduran, F. Foschum, A. Kienle, F. Baribeau, S. Leclair, J.-P. Bouchard, I. Noiseux, P. Gallant, O. Mermut, A. Farina, A. Pifferi, A. Torricelli, R. Cubeddu, H.-C. Ho, M. Mazurenka, H. Wabnitz, K. Klauenberg, O. Bodnar, C. Elster, M. Bénazech-Lavoué, Y. Bérubé-Lauzière, F. Lesage, D. Khoptyar, A. A. Subash, S. Andersson-Engels, P. Di Ninni, F. Martelli, and G. Zaccanti, “Determination of reference values for optical properties of liquid phantoms based on Intralipid and India ink,” Biomed. Opt. Express 5(7), 2037–2053 (2014).
[Crossref] [PubMed]

McBride, T. O.

Menna, S.

Mermut, O.

Milej, D.

L. Spinelli, M. Botwicz, N. Zolek, M. Kacprzak, D. Milej, P. Sawosz, A. Liebert, U. Weigel, T. Durduran, F. Foschum, A. Kienle, F. Baribeau, S. Leclair, J.-P. Bouchard, I. Noiseux, P. Gallant, O. Mermut, A. Farina, A. Pifferi, A. Torricelli, R. Cubeddu, H.-C. Ho, M. Mazurenka, H. Wabnitz, K. Klauenberg, O. Bodnar, C. Elster, M. Bénazech-Lavoué, Y. Bérubé-Lauzière, F. Lesage, D. Khoptyar, A. A. Subash, S. Andersson-Engels, P. Di Ninni, F. Martelli, and G. Zaccanti, “Determination of reference values for optical properties of liquid phantoms based on Intralipid and India ink,” Biomed. Opt. Express 5(7), 2037–2053 (2014).
[Crossref] [PubMed]

H. Wabnitz, A. Jelzow, M. Mazurenka, O. Steinkellner, R. Macdonald, D. Milej, N. Żołek, M. Kacprzak, P. Sawosz, R. Maniewski, A. Liebert, S. Magazov, J. Hebden, F. Martelli, P. Di Ninni, G. Zaccanti, A. Torricelli, D. Contini, R. Re, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Pifferi, “Performance assessment of time-domain optical brain imagers, part 2: nEUROPt protocol,” J. Biomed. Opt. 19(8), 086012 (2014).
[Crossref] [PubMed]

H. Wabnitz, D. R. Taubert, M. Mazurenka, O. Steinkellner, A. Jelzow, R. Macdonald, D. Milej, P. Sawosz, M. Kacprzak, A. Liebert, R. Cooper, J. Hebden, A. Pifferi, A. Farina, I. Bargigia, D. Contini, M. Caffini, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Torricelli, “Performance assessment of time-domain optical brain imagers, part 1: basic instrumental performance protocol,” J. Biomed. Opt. 19(8), 086010 (2014).
[Crossref] [PubMed]

Möller, M.

Mora, A. D.

L. Di Sieno, G. Bettega, M. Berger, C. Hamou, M. Aribert, A. D. Mora, A. Puszka, H. Grateau, D. Contini, L. Hervé, J.-L. Coll, J.-M. Dinten, A. Pifferi, and A. Planat-Chrétien, “Toward noninvasive assessment of flap viability with time-resolved diffuse optical tomography: a preclinical test on rats,” J. Biomed. Opt. 21(2), 025004 (2016).
[Crossref] [PubMed]

A. Puszka, L. Di Sieno, A. D. Mora, A. Pifferi, D. Contini, A. Planat-Chrétien, A. Koenig, G. Boso, A. Tosi, L. Hervé, and J.-M. Dinten, “Spatial resolution in depth for time-resolved diffuse optical tomography using short source-detector separations,” Biomed. Opt. Express 6(1), 1–10 (2015).
[Crossref] [PubMed]

A. D. Mora, D. Contini, S. Arridge, F. Martelli, A. Tosi, G. Boso, A. Farina, T. Durduran, E. Martinenghi, A. Torricelli, and A. Pifferi, “Towards next-generation time-domain diffuse optics for extreme depth penetration and sensitivity,” Biomed. Opt. Express 6(5), 1749–1760 (2015).
[Crossref] [PubMed]

L. D. Sieno, A. D. Mora, G. Boso, A. Tosi, A. Pifferi, R. Cubeddu, and D. Contini, “Diffuse optics using a dual window fast-gated counter,” Appl. Opt. 53(31), 7394–7401 (2014).
[Crossref] [PubMed]

A. Puszka, L. Di Sieno, A. D. Mora, A. Pifferi, D. Contini, G. Boso, A. Tosi, L. Hervé, A. Planat-Chrétien, A. Koenig, and J.-M. Dinten, “Time-resolved diffuse optical tomography using fast-gated single-photon avalanche diodes,” Biomed. Opt. Express 4(8), 1351–1365 (2013).
[Crossref] [PubMed]

Nghiem, H. L.

Noiseux, I.

Ntziachristos, V.

J. P. Culver, R. Choe, M. J. Holboke, L. Zubkov, T. Durduran, A. Slemp, V. Ntziachristos, B. Chance, and A. G. Yodh, “Three-dimensional diffuse optical tomography in the parallel plane transmission geometry: evaluation of a hybrid frequency domain/continuous wave clinical system for breast imaging,” Med. Phys. 30(2), 235–247 (2003).
[Crossref] [PubMed]

Osterberg, U. L.

Paulsen, K. D.

B. W. Pogue, S. C. Davis, F. Leblond, M. A. Mastanduno, H. Dehghani, and K. D. Paulsen, “Implicit and explicit prior information in near-infrared spectral imaging: accuracy, quantification and diagnostic value,” Philos Trans A 369(1955), 4531–4557 (2011).
[Crossref] [PubMed]

S. C. Davis, B. W. Pogue, H. Dehghani, and K. D. Paulsen, “Contrast-detail analysis characterizing diffuse optical fluorescence tomography image reconstruction,” J. Biomed. Opt. 10(5), 050501 (2005).
[Crossref] [PubMed]

S. Srinivasan, B. W. Pogue, H. Dehghani, S. Jiang, X. Song, and K. D. Paulsen, “Improved quantification of small objects in near-infrared diffuse optical tomography,” J. Biomed. Opt. 9(6), 1161–1171 (2004).
[Crossref] [PubMed]

H. Dehghani, B. W. Pogue, J. Shudong, B. Brooksby, and K. D. Paulsen, “Three-dimensional optical tomography: resolution in small-object imaging,” Appl. Opt. 42(16), 3117–3128 (2003).
[Crossref] [PubMed]

T. O. McBride, B. W. Pogue, S. Jiang, U. L. Osterberg, K. D. Paulsen, and S. P. Poplack, “Initial studies of in vivo absorbing and scattering heterogeneity in near-infrared tomographic breast imaging,” Opt. Lett. 26(11), 822–824 (2001).
[Crossref] [PubMed]

T. O. McBride, B. W. Pogue, E. D. Gerety, S. B. Poplack, U. L. Osterberg, and K. D. Paulsen, “Spectroscopic diffuse optical tomography for the quantitative assessment of hemoglobin concentration and oxygen saturation in breast tissue,” Appl. Opt. 38(25), 5480–5490 (1999).
[Crossref] [PubMed]

Pifferi, A.

L. Di Sieno, G. Bettega, M. Berger, C. Hamou, M. Aribert, A. D. Mora, A. Puszka, H. Grateau, D. Contini, L. Hervé, J.-L. Coll, J.-M. Dinten, A. Pifferi, and A. Planat-Chrétien, “Toward noninvasive assessment of flap viability with time-resolved diffuse optical tomography: a preclinical test on rats,” J. Biomed. Opt. 21(2), 025004 (2016).
[Crossref] [PubMed]

A. Puszka, L. Di Sieno, A. D. Mora, A. Pifferi, D. Contini, A. Planat-Chrétien, A. Koenig, G. Boso, A. Tosi, L. Hervé, and J.-M. Dinten, “Spatial resolution in depth for time-resolved diffuse optical tomography using short source-detector separations,” Biomed. Opt. Express 6(1), 1–10 (2015).
[Crossref] [PubMed]

A. D. Mora, D. Contini, S. Arridge, F. Martelli, A. Tosi, G. Boso, A. Farina, T. Durduran, E. Martinenghi, A. Torricelli, and A. Pifferi, “Towards next-generation time-domain diffuse optics for extreme depth penetration and sensitivity,” Biomed. Opt. Express 6(5), 1749–1760 (2015).
[Crossref] [PubMed]

L. D. Sieno, A. D. Mora, G. Boso, A. Tosi, A. Pifferi, R. Cubeddu, and D. Contini, “Diffuse optics using a dual window fast-gated counter,” Appl. Opt. 53(31), 7394–7401 (2014).
[Crossref] [PubMed]

G. Quarto, L. Spinelli, A. Pifferi, A. Torricelli, R. Cubeddu, F. Abbate, N. Balestreri, S. Menna, E. Cassano, and P. Taroni, “Estimate of tissue composition in malignant and benign breast lesions by time-domain optical mammography,” Biomed. Opt. Express 5(10), 3684–3698 (2014).
[Crossref] [PubMed]

L. Spinelli, M. Botwicz, N. Zolek, M. Kacprzak, D. Milej, P. Sawosz, A. Liebert, U. Weigel, T. Durduran, F. Foschum, A. Kienle, F. Baribeau, S. Leclair, J.-P. Bouchard, I. Noiseux, P. Gallant, O. Mermut, A. Farina, A. Pifferi, A. Torricelli, R. Cubeddu, H.-C. Ho, M. Mazurenka, H. Wabnitz, K. Klauenberg, O. Bodnar, C. Elster, M. Bénazech-Lavoué, Y. Bérubé-Lauzière, F. Lesage, D. Khoptyar, A. A. Subash, S. Andersson-Engels, P. Di Ninni, F. Martelli, and G. Zaccanti, “Determination of reference values for optical properties of liquid phantoms based on Intralipid and India ink,” Biomed. Opt. Express 5(7), 2037–2053 (2014).
[Crossref] [PubMed]

H. Wabnitz, A. Jelzow, M. Mazurenka, O. Steinkellner, R. Macdonald, D. Milej, N. Żołek, M. Kacprzak, P. Sawosz, R. Maniewski, A. Liebert, S. Magazov, J. Hebden, F. Martelli, P. Di Ninni, G. Zaccanti, A. Torricelli, D. Contini, R. Re, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Pifferi, “Performance assessment of time-domain optical brain imagers, part 2: nEUROPt protocol,” J. Biomed. Opt. 19(8), 086012 (2014).
[Crossref] [PubMed]

H. Wabnitz, D. R. Taubert, M. Mazurenka, O. Steinkellner, A. Jelzow, R. Macdonald, D. Milej, P. Sawosz, M. Kacprzak, A. Liebert, R. Cooper, J. Hebden, A. Pifferi, A. Farina, I. Bargigia, D. Contini, M. Caffini, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Torricelli, “Performance assessment of time-domain optical brain imagers, part 1: basic instrumental performance protocol,” J. Biomed. Opt. 19(8), 086010 (2014).
[Crossref] [PubMed]

F. Martelli, A. Pifferi, D. Contini, L. Spinelli, A. Torricelli, H. Wabnitz, R. Macdonald, A. Sassaroli, and G. Zaccanti, “Phantoms for diffuse optical imaging based on totally absorbing objects, part 1: Basic concepts,” J. Biomed. Opt. 18(6), 066014 (2013).
[Crossref] [PubMed]

A. Puszka, L. Di Sieno, A. D. Mora, A. Pifferi, D. Contini, G. Boso, A. Tosi, L. Hervé, A. Planat-Chrétien, A. Koenig, and J.-M. Dinten, “Time-resolved diffuse optical tomography using fast-gated single-photon avalanche diodes,” Biomed. Opt. Express 4(8), 1351–1365 (2013).
[Crossref] [PubMed]

A. Pifferi, A. Farina, A. Torricelli, G. Quarto, R. Cubeddu, and P. Taroni, “Review: Time-domain broadband near infrared spectroscopy of the female breast: a focused review from basic principles to future perspectives,” J. Near Infrared Spectrosc. 20(1), 223–235 (2012).
[Crossref]

A. Tosi, A. Dalla Mora, F. Zappa, A. Gulinatti, D. Contini, A. Pifferi, L. Spinelli, A. Torricelli, and R. Cubeddu, “Fast-gated single-photon counting technique widens dynamic range and speeds up acquisition time in time-resolved measurements,” Opt. Express 19(11), 10735–10746 (2011).
[Crossref] [PubMed]

A. Pifferi, A. Torricelli, L. Spinelli, D. Contini, R. Cubeddu, F. Martelli, G. Zaccanti, A. Tosi, A. Dalla Mora, F. Zappa, and S. Cova, “Time-Resolved Diffuse Reflectance Using Small Source-Detector Separation and Fast Single-Photon Gating,” Phys. Rev. Lett. 100(13), 138101 (2008).
[Crossref] [PubMed]

A. Torricelli, A. Pifferi, L. Spinelli, R. Cubeddu, F. Martelli, S. Del Bianco, and G. Zaccanti, “Time-Resolved Reflectance At Null Source-Detector Separation: Improving Contrast and Resolution In Diffuse Optical Imaging,” Phys. Rev. Lett. 95(7), 078101 (2005).
[Crossref] [PubMed]

A. Pifferi, A. Torricelli, A. Bassi, P. Taroni, R. Cubeddu, H. Wabnitz, D. Grosenick, M. Möller, R. Macdonald, J. Swartling, T. Svensson, S. Andersson-Engels, R. L. P. van Veen, H. J. C. M. Sterenborg, J.-M. Tualle, H. L. Nghiem, S. Avrillier, M. Whelan, and H. Stamm, “Performance assessment of photon migration instruments: the MEDPHOT protocol,” Appl. Opt. 44(11), 2104–2114 (2005).
[Crossref] [PubMed]

Planat-Chrétien, A.

L. Di Sieno, G. Bettega, M. Berger, C. Hamou, M. Aribert, A. D. Mora, A. Puszka, H. Grateau, D. Contini, L. Hervé, J.-L. Coll, J.-M. Dinten, A. Pifferi, and A. Planat-Chrétien, “Toward noninvasive assessment of flap viability with time-resolved diffuse optical tomography: a preclinical test on rats,” J. Biomed. Opt. 21(2), 025004 (2016).
[Crossref] [PubMed]

A. Puszka, L. Di Sieno, A. D. Mora, A. Pifferi, D. Contini, A. Planat-Chrétien, A. Koenig, G. Boso, A. Tosi, L. Hervé, and J.-M. Dinten, “Spatial resolution in depth for time-resolved diffuse optical tomography using short source-detector separations,” Biomed. Opt. Express 6(1), 1–10 (2015).
[Crossref] [PubMed]

A. Puszka, L. Di Sieno, A. D. Mora, A. Pifferi, D. Contini, G. Boso, A. Tosi, L. Hervé, A. Planat-Chrétien, A. Koenig, and J.-M. Dinten, “Time-resolved diffuse optical tomography using fast-gated single-photon avalanche diodes,” Biomed. Opt. Express 4(8), 1351–1365 (2013).
[Crossref] [PubMed]

A. Puszka, L. Hervé, A. Planat-Chrétien, A. Koenig, J. Derouard, and J.-M. Dinten, “Time-domain reflectance diffuse optical tomography with Mellin-Laplace transform for experimental detection and depth localization of a single absorbing inclusion,” Biomed. Opt. Express 4(4), 569–583 (2013).
[Crossref] [PubMed]

L. Hervé, A. Puszka, A. Planat-Chrétien, and J.-M. Dinten, “Time-domain diffuse optical tomography processing by using the Mellin-Laplace transform,” Appl. Opt. 51(25), 5978–5988 (2012).
[Crossref] [PubMed]

Pogue, B. W.

B. W. Pogue, S. C. Davis, F. Leblond, M. A. Mastanduno, H. Dehghani, and K. D. Paulsen, “Implicit and explicit prior information in near-infrared spectral imaging: accuracy, quantification and diagnostic value,” Philos Trans A 369(1955), 4531–4557 (2011).
[Crossref] [PubMed]

S. C. Davis, B. W. Pogue, H. Dehghani, and K. D. Paulsen, “Contrast-detail analysis characterizing diffuse optical fluorescence tomography image reconstruction,” J. Biomed. Opt. 10(5), 050501 (2005).
[Crossref] [PubMed]

S. Srinivasan, B. W. Pogue, H. Dehghani, S. Jiang, X. Song, and K. D. Paulsen, “Improved quantification of small objects in near-infrared diffuse optical tomography,” J. Biomed. Opt. 9(6), 1161–1171 (2004).
[Crossref] [PubMed]

H. Dehghani, B. W. Pogue, J. Shudong, B. Brooksby, and K. D. Paulsen, “Three-dimensional optical tomography: resolution in small-object imaging,” Appl. Opt. 42(16), 3117–3128 (2003).
[Crossref] [PubMed]

T. O. McBride, B. W. Pogue, S. Jiang, U. L. Osterberg, K. D. Paulsen, and S. P. Poplack, “Initial studies of in vivo absorbing and scattering heterogeneity in near-infrared tomographic breast imaging,” Opt. Lett. 26(11), 822–824 (2001).
[Crossref] [PubMed]

T. O. McBride, B. W. Pogue, E. D. Gerety, S. B. Poplack, U. L. Osterberg, and K. D. Paulsen, “Spectroscopic diffuse optical tomography for the quantitative assessment of hemoglobin concentration and oxygen saturation in breast tissue,” Appl. Opt. 38(25), 5480–5490 (1999).
[Crossref] [PubMed]

Poplack, S. B.

Poplack, S. P.

Puszka, A.

L. Di Sieno, G. Bettega, M. Berger, C. Hamou, M. Aribert, A. D. Mora, A. Puszka, H. Grateau, D. Contini, L. Hervé, J.-L. Coll, J.-M. Dinten, A. Pifferi, and A. Planat-Chrétien, “Toward noninvasive assessment of flap viability with time-resolved diffuse optical tomography: a preclinical test on rats,” J. Biomed. Opt. 21(2), 025004 (2016).
[Crossref] [PubMed]

A. Puszka, L. Di Sieno, A. D. Mora, A. Pifferi, D. Contini, A. Planat-Chrétien, A. Koenig, G. Boso, A. Tosi, L. Hervé, and J.-M. Dinten, “Spatial resolution in depth for time-resolved diffuse optical tomography using short source-detector separations,” Biomed. Opt. Express 6(1), 1–10 (2015).
[Crossref] [PubMed]

A. Puszka, L. Hervé, A. Planat-Chrétien, A. Koenig, J. Derouard, and J.-M. Dinten, “Time-domain reflectance diffuse optical tomography with Mellin-Laplace transform for experimental detection and depth localization of a single absorbing inclusion,” Biomed. Opt. Express 4(4), 569–583 (2013).
[Crossref] [PubMed]

A. Puszka, L. Di Sieno, A. D. Mora, A. Pifferi, D. Contini, G. Boso, A. Tosi, L. Hervé, A. Planat-Chrétien, A. Koenig, and J.-M. Dinten, “Time-resolved diffuse optical tomography using fast-gated single-photon avalanche diodes,” Biomed. Opt. Express 4(8), 1351–1365 (2013).
[Crossref] [PubMed]

L. Hervé, A. Puszka, A. Planat-Chrétien, and J.-M. Dinten, “Time-domain diffuse optical tomography processing by using the Mellin-Laplace transform,” Appl. Opt. 51(25), 5978–5988 (2012).
[Crossref] [PubMed]

Quarto, G.

Re, R.

H. Wabnitz, A. Jelzow, M. Mazurenka, O. Steinkellner, R. Macdonald, D. Milej, N. Żołek, M. Kacprzak, P. Sawosz, R. Maniewski, A. Liebert, S. Magazov, J. Hebden, F. Martelli, P. Di Ninni, G. Zaccanti, A. Torricelli, D. Contini, R. Re, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Pifferi, “Performance assessment of time-domain optical brain imagers, part 2: nEUROPt protocol,” J. Biomed. Opt. 19(8), 086012 (2014).
[Crossref] [PubMed]

Robichaux-Viehoever, A.

A. T. Eggebrecht, S. L. Ferradal, A. Robichaux-Viehoever, M. S. Hassanpour, H. Dehghani, A. Z. Snyder, T. Hershey, and J. P. Culver, “Mapping distributed brain function and networks with diffuse optical tomography,” Nat. Photonics 8(6), 448–454 (2014).
[Crossref] [PubMed]

Sassaroli, A.

F. Martelli, A. Pifferi, D. Contini, L. Spinelli, A. Torricelli, H. Wabnitz, R. Macdonald, A. Sassaroli, and G. Zaccanti, “Phantoms for diffuse optical imaging based on totally absorbing objects, part 1: Basic concepts,” J. Biomed. Opt. 18(6), 066014 (2013).
[Crossref] [PubMed]

Sawosz, P.

H. Wabnitz, A. Jelzow, M. Mazurenka, O. Steinkellner, R. Macdonald, D. Milej, N. Żołek, M. Kacprzak, P. Sawosz, R. Maniewski, A. Liebert, S. Magazov, J. Hebden, F. Martelli, P. Di Ninni, G. Zaccanti, A. Torricelli, D. Contini, R. Re, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Pifferi, “Performance assessment of time-domain optical brain imagers, part 2: nEUROPt protocol,” J. Biomed. Opt. 19(8), 086012 (2014).
[Crossref] [PubMed]

H. Wabnitz, D. R. Taubert, M. Mazurenka, O. Steinkellner, A. Jelzow, R. Macdonald, D. Milej, P. Sawosz, M. Kacprzak, A. Liebert, R. Cooper, J. Hebden, A. Pifferi, A. Farina, I. Bargigia, D. Contini, M. Caffini, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Torricelli, “Performance assessment of time-domain optical brain imagers, part 1: basic instrumental performance protocol,” J. Biomed. Opt. 19(8), 086010 (2014).
[Crossref] [PubMed]

L. Spinelli, M. Botwicz, N. Zolek, M. Kacprzak, D. Milej, P. Sawosz, A. Liebert, U. Weigel, T. Durduran, F. Foschum, A. Kienle, F. Baribeau, S. Leclair, J.-P. Bouchard, I. Noiseux, P. Gallant, O. Mermut, A. Farina, A. Pifferi, A. Torricelli, R. Cubeddu, H.-C. Ho, M. Mazurenka, H. Wabnitz, K. Klauenberg, O. Bodnar, C. Elster, M. Bénazech-Lavoué, Y. Bérubé-Lauzière, F. Lesage, D. Khoptyar, A. A. Subash, S. Andersson-Engels, P. Di Ninni, F. Martelli, and G. Zaccanti, “Determination of reference values for optical properties of liquid phantoms based on Intralipid and India ink,” Biomed. Opt. Express 5(7), 2037–2053 (2014).
[Crossref] [PubMed]

Schotland, J. C.

S. R. Arridge and J. C. Schotland, “Optical tomography: forward and inverse problems,” Inverse Probl. 25(12), 123010 (2009).
[Crossref]

Shudong, J.

Sieno, L. D.

Slemp, A.

J. P. Culver, R. Choe, M. J. Holboke, L. Zubkov, T. Durduran, A. Slemp, V. Ntziachristos, B. Chance, and A. G. Yodh, “Three-dimensional diffuse optical tomography in the parallel plane transmission geometry: evaluation of a hybrid frequency domain/continuous wave clinical system for breast imaging,” Med. Phys. 30(2), 235–247 (2003).
[Crossref] [PubMed]

Snyder, A. Z.

A. T. Eggebrecht, S. L. Ferradal, A. Robichaux-Viehoever, M. S. Hassanpour, H. Dehghani, A. Z. Snyder, T. Hershey, and J. P. Culver, “Mapping distributed brain function and networks with diffuse optical tomography,” Nat. Photonics 8(6), 448–454 (2014).
[Crossref] [PubMed]

Sobel, E. S.

Z. Yuan, Q. Zhang, E. S. Sobel, and H. Jiang, “Tomographic x-ray-guided three-dimensional diffuse optical tomography of osteoarthritis in the finger joints,” J. Biomed. Opt. 13(4), 044006 (2008).
[Crossref] [PubMed]

Song, X.

S. Srinivasan, B. W. Pogue, H. Dehghani, S. Jiang, X. Song, and K. D. Paulsen, “Improved quantification of small objects in near-infrared diffuse optical tomography,” J. Biomed. Opt. 9(6), 1161–1171 (2004).
[Crossref] [PubMed]

Spinelli, L.

H. Wabnitz, A. Jelzow, M. Mazurenka, O. Steinkellner, R. Macdonald, D. Milej, N. Żołek, M. Kacprzak, P. Sawosz, R. Maniewski, A. Liebert, S. Magazov, J. Hebden, F. Martelli, P. Di Ninni, G. Zaccanti, A. Torricelli, D. Contini, R. Re, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Pifferi, “Performance assessment of time-domain optical brain imagers, part 2: nEUROPt protocol,” J. Biomed. Opt. 19(8), 086012 (2014).
[Crossref] [PubMed]

H. Wabnitz, D. R. Taubert, M. Mazurenka, O. Steinkellner, A. Jelzow, R. Macdonald, D. Milej, P. Sawosz, M. Kacprzak, A. Liebert, R. Cooper, J. Hebden, A. Pifferi, A. Farina, I. Bargigia, D. Contini, M. Caffini, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Torricelli, “Performance assessment of time-domain optical brain imagers, part 1: basic instrumental performance protocol,” J. Biomed. Opt. 19(8), 086010 (2014).
[Crossref] [PubMed]

G. Quarto, L. Spinelli, A. Pifferi, A. Torricelli, R. Cubeddu, F. Abbate, N. Balestreri, S. Menna, E. Cassano, and P. Taroni, “Estimate of tissue composition in malignant and benign breast lesions by time-domain optical mammography,” Biomed. Opt. Express 5(10), 3684–3698 (2014).
[Crossref] [PubMed]

L. Spinelli, M. Botwicz, N. Zolek, M. Kacprzak, D. Milej, P. Sawosz, A. Liebert, U. Weigel, T. Durduran, F. Foschum, A. Kienle, F. Baribeau, S. Leclair, J.-P. Bouchard, I. Noiseux, P. Gallant, O. Mermut, A. Farina, A. Pifferi, A. Torricelli, R. Cubeddu, H.-C. Ho, M. Mazurenka, H. Wabnitz, K. Klauenberg, O. Bodnar, C. Elster, M. Bénazech-Lavoué, Y. Bérubé-Lauzière, F. Lesage, D. Khoptyar, A. A. Subash, S. Andersson-Engels, P. Di Ninni, F. Martelli, and G. Zaccanti, “Determination of reference values for optical properties of liquid phantoms based on Intralipid and India ink,” Biomed. Opt. Express 5(7), 2037–2053 (2014).
[Crossref] [PubMed]

F. Martelli, A. Pifferi, D. Contini, L. Spinelli, A. Torricelli, H. Wabnitz, R. Macdonald, A. Sassaroli, and G. Zaccanti, “Phantoms for diffuse optical imaging based on totally absorbing objects, part 1: Basic concepts,” J. Biomed. Opt. 18(6), 066014 (2013).
[Crossref] [PubMed]

A. Tosi, A. Dalla Mora, F. Zappa, A. Gulinatti, D. Contini, A. Pifferi, L. Spinelli, A. Torricelli, and R. Cubeddu, “Fast-gated single-photon counting technique widens dynamic range and speeds up acquisition time in time-resolved measurements,” Opt. Express 19(11), 10735–10746 (2011).
[Crossref] [PubMed]

A. Pifferi, A. Torricelli, L. Spinelli, D. Contini, R. Cubeddu, F. Martelli, G. Zaccanti, A. Tosi, A. Dalla Mora, F. Zappa, and S. Cova, “Time-Resolved Diffuse Reflectance Using Small Source-Detector Separation and Fast Single-Photon Gating,” Phys. Rev. Lett. 100(13), 138101 (2008).
[Crossref] [PubMed]

A. Torricelli, A. Pifferi, L. Spinelli, R. Cubeddu, F. Martelli, S. Del Bianco, and G. Zaccanti, “Time-Resolved Reflectance At Null Source-Detector Separation: Improving Contrast and Resolution In Diffuse Optical Imaging,” Phys. Rev. Lett. 95(7), 078101 (2005).
[Crossref] [PubMed]

Srinivasan, S.

S. Srinivasan, B. W. Pogue, H. Dehghani, S. Jiang, X. Song, and K. D. Paulsen, “Improved quantification of small objects in near-infrared diffuse optical tomography,” J. Biomed. Opt. 9(6), 1161–1171 (2004).
[Crossref] [PubMed]

Stamm, H.

Steinkellner, O.

H. Wabnitz, A. Jelzow, M. Mazurenka, O. Steinkellner, R. Macdonald, D. Milej, N. Żołek, M. Kacprzak, P. Sawosz, R. Maniewski, A. Liebert, S. Magazov, J. Hebden, F. Martelli, P. Di Ninni, G. Zaccanti, A. Torricelli, D. Contini, R. Re, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Pifferi, “Performance assessment of time-domain optical brain imagers, part 2: nEUROPt protocol,” J. Biomed. Opt. 19(8), 086012 (2014).
[Crossref] [PubMed]

H. Wabnitz, D. R. Taubert, M. Mazurenka, O. Steinkellner, A. Jelzow, R. Macdonald, D. Milej, P. Sawosz, M. Kacprzak, A. Liebert, R. Cooper, J. Hebden, A. Pifferi, A. Farina, I. Bargigia, D. Contini, M. Caffini, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Torricelli, “Performance assessment of time-domain optical brain imagers, part 1: basic instrumental performance protocol,” J. Biomed. Opt. 19(8), 086010 (2014).
[Crossref] [PubMed]

Sterenborg, H. J. C. M.

Subash, A. A.

Svensson, T.

Swartling, J.

Taroni, P.

Taubert, D. R.

H. Wabnitz, D. R. Taubert, M. Mazurenka, O. Steinkellner, A. Jelzow, R. Macdonald, D. Milej, P. Sawosz, M. Kacprzak, A. Liebert, R. Cooper, J. Hebden, A. Pifferi, A. Farina, I. Bargigia, D. Contini, M. Caffini, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Torricelli, “Performance assessment of time-domain optical brain imagers, part 1: basic instrumental performance protocol,” J. Biomed. Opt. 19(8), 086010 (2014).
[Crossref] [PubMed]

Torricelli, A.

A. D. Mora, D. Contini, S. Arridge, F. Martelli, A. Tosi, G. Boso, A. Farina, T. Durduran, E. Martinenghi, A. Torricelli, and A. Pifferi, “Towards next-generation time-domain diffuse optics for extreme depth penetration and sensitivity,” Biomed. Opt. Express 6(5), 1749–1760 (2015).
[Crossref] [PubMed]

H. Wabnitz, A. Jelzow, M. Mazurenka, O. Steinkellner, R. Macdonald, D. Milej, N. Żołek, M. Kacprzak, P. Sawosz, R. Maniewski, A. Liebert, S. Magazov, J. Hebden, F. Martelli, P. Di Ninni, G. Zaccanti, A. Torricelli, D. Contini, R. Re, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Pifferi, “Performance assessment of time-domain optical brain imagers, part 2: nEUROPt protocol,” J. Biomed. Opt. 19(8), 086012 (2014).
[Crossref] [PubMed]

H. Wabnitz, D. R. Taubert, M. Mazurenka, O. Steinkellner, A. Jelzow, R. Macdonald, D. Milej, P. Sawosz, M. Kacprzak, A. Liebert, R. Cooper, J. Hebden, A. Pifferi, A. Farina, I. Bargigia, D. Contini, M. Caffini, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Torricelli, “Performance assessment of time-domain optical brain imagers, part 1: basic instrumental performance protocol,” J. Biomed. Opt. 19(8), 086010 (2014).
[Crossref] [PubMed]

G. Quarto, L. Spinelli, A. Pifferi, A. Torricelli, R. Cubeddu, F. Abbate, N. Balestreri, S. Menna, E. Cassano, and P. Taroni, “Estimate of tissue composition in malignant and benign breast lesions by time-domain optical mammography,” Biomed. Opt. Express 5(10), 3684–3698 (2014).
[Crossref] [PubMed]

L. Spinelli, M. Botwicz, N. Zolek, M. Kacprzak, D. Milej, P. Sawosz, A. Liebert, U. Weigel, T. Durduran, F. Foschum, A. Kienle, F. Baribeau, S. Leclair, J.-P. Bouchard, I. Noiseux, P. Gallant, O. Mermut, A. Farina, A. Pifferi, A. Torricelli, R. Cubeddu, H.-C. Ho, M. Mazurenka, H. Wabnitz, K. Klauenberg, O. Bodnar, C. Elster, M. Bénazech-Lavoué, Y. Bérubé-Lauzière, F. Lesage, D. Khoptyar, A. A. Subash, S. Andersson-Engels, P. Di Ninni, F. Martelli, and G. Zaccanti, “Determination of reference values for optical properties of liquid phantoms based on Intralipid and India ink,” Biomed. Opt. Express 5(7), 2037–2053 (2014).
[Crossref] [PubMed]

F. Martelli, A. Pifferi, D. Contini, L. Spinelli, A. Torricelli, H. Wabnitz, R. Macdonald, A. Sassaroli, and G. Zaccanti, “Phantoms for diffuse optical imaging based on totally absorbing objects, part 1: Basic concepts,” J. Biomed. Opt. 18(6), 066014 (2013).
[Crossref] [PubMed]

A. Pifferi, A. Farina, A. Torricelli, G. Quarto, R. Cubeddu, and P. Taroni, “Review: Time-domain broadband near infrared spectroscopy of the female breast: a focused review from basic principles to future perspectives,” J. Near Infrared Spectrosc. 20(1), 223–235 (2012).
[Crossref]

A. Tosi, A. Dalla Mora, F. Zappa, A. Gulinatti, D. Contini, A. Pifferi, L. Spinelli, A. Torricelli, and R. Cubeddu, “Fast-gated single-photon counting technique widens dynamic range and speeds up acquisition time in time-resolved measurements,” Opt. Express 19(11), 10735–10746 (2011).
[Crossref] [PubMed]

A. Pifferi, A. Torricelli, L. Spinelli, D. Contini, R. Cubeddu, F. Martelli, G. Zaccanti, A. Tosi, A. Dalla Mora, F. Zappa, and S. Cova, “Time-Resolved Diffuse Reflectance Using Small Source-Detector Separation and Fast Single-Photon Gating,” Phys. Rev. Lett. 100(13), 138101 (2008).
[Crossref] [PubMed]

A. Torricelli, A. Pifferi, L. Spinelli, R. Cubeddu, F. Martelli, S. Del Bianco, and G. Zaccanti, “Time-Resolved Reflectance At Null Source-Detector Separation: Improving Contrast and Resolution In Diffuse Optical Imaging,” Phys. Rev. Lett. 95(7), 078101 (2005).
[Crossref] [PubMed]

A. Pifferi, A. Torricelli, A. Bassi, P. Taroni, R. Cubeddu, H. Wabnitz, D. Grosenick, M. Möller, R. Macdonald, J. Swartling, T. Svensson, S. Andersson-Engels, R. L. P. van Veen, H. J. C. M. Sterenborg, J.-M. Tualle, H. L. Nghiem, S. Avrillier, M. Whelan, and H. Stamm, “Performance assessment of photon migration instruments: the MEDPHOT protocol,” Appl. Opt. 44(11), 2104–2114 (2005).
[Crossref] [PubMed]

Tosi, A.

A. Puszka, L. Di Sieno, A. D. Mora, A. Pifferi, D. Contini, A. Planat-Chrétien, A. Koenig, G. Boso, A. Tosi, L. Hervé, and J.-M. Dinten, “Spatial resolution in depth for time-resolved diffuse optical tomography using short source-detector separations,” Biomed. Opt. Express 6(1), 1–10 (2015).
[Crossref] [PubMed]

A. D. Mora, D. Contini, S. Arridge, F. Martelli, A. Tosi, G. Boso, A. Farina, T. Durduran, E. Martinenghi, A. Torricelli, and A. Pifferi, “Towards next-generation time-domain diffuse optics for extreme depth penetration and sensitivity,” Biomed. Opt. Express 6(5), 1749–1760 (2015).
[Crossref] [PubMed]

L. D. Sieno, A. D. Mora, G. Boso, A. Tosi, A. Pifferi, R. Cubeddu, and D. Contini, “Diffuse optics using a dual window fast-gated counter,” Appl. Opt. 53(31), 7394–7401 (2014).
[Crossref] [PubMed]

A. Puszka, L. Di Sieno, A. D. Mora, A. Pifferi, D. Contini, G. Boso, A. Tosi, L. Hervé, A. Planat-Chrétien, A. Koenig, and J.-M. Dinten, “Time-resolved diffuse optical tomography using fast-gated single-photon avalanche diodes,” Biomed. Opt. Express 4(8), 1351–1365 (2013).
[Crossref] [PubMed]

G. Boso, A. Dalla Mora, A. Della Frera, and A. Tosi, “Fast-gating of single-photon avalanche diodes with 200ps transitions and 30ps timing jitter,” Sens. Actuators A Phys. 191, 61–67 (2013).
[Crossref]

A. Tosi, A. Dalla Mora, F. Zappa, A. Gulinatti, D. Contini, A. Pifferi, L. Spinelli, A. Torricelli, and R. Cubeddu, “Fast-gated single-photon counting technique widens dynamic range and speeds up acquisition time in time-resolved measurements,” Opt. Express 19(11), 10735–10746 (2011).
[Crossref] [PubMed]

A. Pifferi, A. Torricelli, L. Spinelli, D. Contini, R. Cubeddu, F. Martelli, G. Zaccanti, A. Tosi, A. Dalla Mora, F. Zappa, and S. Cova, “Time-Resolved Diffuse Reflectance Using Small Source-Detector Separation and Fast Single-Photon Gating,” Phys. Rev. Lett. 100(13), 138101 (2008).
[Crossref] [PubMed]

Tualle, J.-M.

Valentini, G.

N. Ducros, C. D’Andrea, A. Bassi, G. Valentini, and S. Arridge, “A virtual source pattern method for fluorescence tomography with structured light,” Phys. Med. Biol. 57(12), 3811–3832 (2012).
[Crossref] [PubMed]

C. D’Andrea, N. Ducros, A. Bassi, S. Arridge, and G. Valentini, “Fast 3D optical reconstruction in turbid media using spatially modulated light,” Biomed. Opt. Express 1(2), 471–481 (2010).
[Crossref] [PubMed]

van Veen, R. L. P.

Venugopal, V.

Wabnitz, H.

L. Spinelli, M. Botwicz, N. Zolek, M. Kacprzak, D. Milej, P. Sawosz, A. Liebert, U. Weigel, T. Durduran, F. Foschum, A. Kienle, F. Baribeau, S. Leclair, J.-P. Bouchard, I. Noiseux, P. Gallant, O. Mermut, A. Farina, A. Pifferi, A. Torricelli, R. Cubeddu, H.-C. Ho, M. Mazurenka, H. Wabnitz, K. Klauenberg, O. Bodnar, C. Elster, M. Bénazech-Lavoué, Y. Bérubé-Lauzière, F. Lesage, D. Khoptyar, A. A. Subash, S. Andersson-Engels, P. Di Ninni, F. Martelli, and G. Zaccanti, “Determination of reference values for optical properties of liquid phantoms based on Intralipid and India ink,” Biomed. Opt. Express 5(7), 2037–2053 (2014).
[Crossref] [PubMed]

H. Wabnitz, D. R. Taubert, M. Mazurenka, O. Steinkellner, A. Jelzow, R. Macdonald, D. Milej, P. Sawosz, M. Kacprzak, A. Liebert, R. Cooper, J. Hebden, A. Pifferi, A. Farina, I. Bargigia, D. Contini, M. Caffini, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Torricelli, “Performance assessment of time-domain optical brain imagers, part 1: basic instrumental performance protocol,” J. Biomed. Opt. 19(8), 086010 (2014).
[Crossref] [PubMed]

H. Wabnitz, A. Jelzow, M. Mazurenka, O. Steinkellner, R. Macdonald, D. Milej, N. Żołek, M. Kacprzak, P. Sawosz, R. Maniewski, A. Liebert, S. Magazov, J. Hebden, F. Martelli, P. Di Ninni, G. Zaccanti, A. Torricelli, D. Contini, R. Re, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Pifferi, “Performance assessment of time-domain optical brain imagers, part 2: nEUROPt protocol,” J. Biomed. Opt. 19(8), 086012 (2014).
[Crossref] [PubMed]

F. Martelli, A. Pifferi, D. Contini, L. Spinelli, A. Torricelli, H. Wabnitz, R. Macdonald, A. Sassaroli, and G. Zaccanti, “Phantoms for diffuse optical imaging based on totally absorbing objects, part 1: Basic concepts,” J. Biomed. Opt. 18(6), 066014 (2013).
[Crossref] [PubMed]

A. Pifferi, A. Torricelli, A. Bassi, P. Taroni, R. Cubeddu, H. Wabnitz, D. Grosenick, M. Möller, R. Macdonald, J. Swartling, T. Svensson, S. Andersson-Engels, R. L. P. van Veen, H. J. C. M. Sterenborg, J.-M. Tualle, H. L. Nghiem, S. Avrillier, M. Whelan, and H. Stamm, “Performance assessment of photon migration instruments: the MEDPHOT protocol,” Appl. Opt. 44(11), 2104–2114 (2005).
[Crossref] [PubMed]

Weigel, U.

Whelan, M.

Yodh, A. G.

J. P. Culver, R. Choe, M. J. Holboke, L. Zubkov, T. Durduran, A. Slemp, V. Ntziachristos, B. Chance, and A. G. Yodh, “Three-dimensional diffuse optical tomography in the parallel plane transmission geometry: evaluation of a hybrid frequency domain/continuous wave clinical system for breast imaging,” Med. Phys. 30(2), 235–247 (2003).
[Crossref] [PubMed]

J. P. Culver, T. Durduran, D. Furuya, C. Cheung, J. H. Greenberg, and A. G. Yodh, “Diffuse optical tomography of cerebral blood flow, oxygenation, and metabolism in rat during focal ischemia,” J. Cereb. Blood Flow Metab. 23(8), 911–924 (2003).
[Crossref] [PubMed]

Yuan, Z.

Z. Yuan, Q. Zhang, E. S. Sobel, and H. Jiang, “Tomographic x-ray-guided three-dimensional diffuse optical tomography of osteoarthritis in the finger joints,” J. Biomed. Opt. 13(4), 044006 (2008).
[Crossref] [PubMed]

Zaccanti, G.

H. Wabnitz, A. Jelzow, M. Mazurenka, O. Steinkellner, R. Macdonald, D. Milej, N. Żołek, M. Kacprzak, P. Sawosz, R. Maniewski, A. Liebert, S. Magazov, J. Hebden, F. Martelli, P. Di Ninni, G. Zaccanti, A. Torricelli, D. Contini, R. Re, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Pifferi, “Performance assessment of time-domain optical brain imagers, part 2: nEUROPt protocol,” J. Biomed. Opt. 19(8), 086012 (2014).
[Crossref] [PubMed]

L. Spinelli, M. Botwicz, N. Zolek, M. Kacprzak, D. Milej, P. Sawosz, A. Liebert, U. Weigel, T. Durduran, F. Foschum, A. Kienle, F. Baribeau, S. Leclair, J.-P. Bouchard, I. Noiseux, P. Gallant, O. Mermut, A. Farina, A. Pifferi, A. Torricelli, R. Cubeddu, H.-C. Ho, M. Mazurenka, H. Wabnitz, K. Klauenberg, O. Bodnar, C. Elster, M. Bénazech-Lavoué, Y. Bérubé-Lauzière, F. Lesage, D. Khoptyar, A. A. Subash, S. Andersson-Engels, P. Di Ninni, F. Martelli, and G. Zaccanti, “Determination of reference values for optical properties of liquid phantoms based on Intralipid and India ink,” Biomed. Opt. Express 5(7), 2037–2053 (2014).
[Crossref] [PubMed]

F. Martelli, A. Pifferi, D. Contini, L. Spinelli, A. Torricelli, H. Wabnitz, R. Macdonald, A. Sassaroli, and G. Zaccanti, “Phantoms for diffuse optical imaging based on totally absorbing objects, part 1: Basic concepts,” J. Biomed. Opt. 18(6), 066014 (2013).
[Crossref] [PubMed]

A. Pifferi, A. Torricelli, L. Spinelli, D. Contini, R. Cubeddu, F. Martelli, G. Zaccanti, A. Tosi, A. Dalla Mora, F. Zappa, and S. Cova, “Time-Resolved Diffuse Reflectance Using Small Source-Detector Separation and Fast Single-Photon Gating,” Phys. Rev. Lett. 100(13), 138101 (2008).
[Crossref] [PubMed]

A. Torricelli, A. Pifferi, L. Spinelli, R. Cubeddu, F. Martelli, S. Del Bianco, and G. Zaccanti, “Time-Resolved Reflectance At Null Source-Detector Separation: Improving Contrast and Resolution In Diffuse Optical Imaging,” Phys. Rev. Lett. 95(7), 078101 (2005).
[Crossref] [PubMed]

Zappa, F.

A. Tosi, A. Dalla Mora, F. Zappa, A. Gulinatti, D. Contini, A. Pifferi, L. Spinelli, A. Torricelli, and R. Cubeddu, “Fast-gated single-photon counting technique widens dynamic range and speeds up acquisition time in time-resolved measurements,” Opt. Express 19(11), 10735–10746 (2011).
[Crossref] [PubMed]

A. Pifferi, A. Torricelli, L. Spinelli, D. Contini, R. Cubeddu, F. Martelli, G. Zaccanti, A. Tosi, A. Dalla Mora, F. Zappa, and S. Cova, “Time-Resolved Diffuse Reflectance Using Small Source-Detector Separation and Fast Single-Photon Gating,” Phys. Rev. Lett. 100(13), 138101 (2008).
[Crossref] [PubMed]

Zhang, Q.

Z. Yuan, Q. Zhang, E. S. Sobel, and H. Jiang, “Tomographic x-ray-guided three-dimensional diffuse optical tomography of osteoarthritis in the finger joints,” J. Biomed. Opt. 13(4), 044006 (2008).
[Crossref] [PubMed]

Zolek, N.

Zubkov, L.

J. P. Culver, R. Choe, M. J. Holboke, L. Zubkov, T. Durduran, A. Slemp, V. Ntziachristos, B. Chance, and A. G. Yodh, “Three-dimensional diffuse optical tomography in the parallel plane transmission geometry: evaluation of a hybrid frequency domain/continuous wave clinical system for breast imaging,” Med. Phys. 30(2), 235–247 (2003).
[Crossref] [PubMed]

Zucchelli, L.

H. Wabnitz, A. Jelzow, M. Mazurenka, O. Steinkellner, R. Macdonald, D. Milej, N. Żołek, M. Kacprzak, P. Sawosz, R. Maniewski, A. Liebert, S. Magazov, J. Hebden, F. Martelli, P. Di Ninni, G. Zaccanti, A. Torricelli, D. Contini, R. Re, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Pifferi, “Performance assessment of time-domain optical brain imagers, part 2: nEUROPt protocol,” J. Biomed. Opt. 19(8), 086012 (2014).
[Crossref] [PubMed]

H. Wabnitz, D. R. Taubert, M. Mazurenka, O. Steinkellner, A. Jelzow, R. Macdonald, D. Milej, P. Sawosz, M. Kacprzak, A. Liebert, R. Cooper, J. Hebden, A. Pifferi, A. Farina, I. Bargigia, D. Contini, M. Caffini, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Torricelli, “Performance assessment of time-domain optical brain imagers, part 1: basic instrumental performance protocol,” J. Biomed. Opt. 19(8), 086010 (2014).
[Crossref] [PubMed]

Appl. Opt. (5)

Biomed. Opt. Express (7)

A. Puszka, L. Di Sieno, A. D. Mora, A. Pifferi, D. Contini, A. Planat-Chrétien, A. Koenig, G. Boso, A. Tosi, L. Hervé, and J.-M. Dinten, “Spatial resolution in depth for time-resolved diffuse optical tomography using short source-detector separations,” Biomed. Opt. Express 6(1), 1–10 (2015).
[Crossref] [PubMed]

A. D. Mora, D. Contini, S. Arridge, F. Martelli, A. Tosi, G. Boso, A. Farina, T. Durduran, E. Martinenghi, A. Torricelli, and A. Pifferi, “Towards next-generation time-domain diffuse optics for extreme depth penetration and sensitivity,” Biomed. Opt. Express 6(5), 1749–1760 (2015).
[Crossref] [PubMed]

A. Puszka, L. Hervé, A. Planat-Chrétien, A. Koenig, J. Derouard, and J.-M. Dinten, “Time-domain reflectance diffuse optical tomography with Mellin-Laplace transform for experimental detection and depth localization of a single absorbing inclusion,” Biomed. Opt. Express 4(4), 569–583 (2013).
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A. Puszka, L. Di Sieno, A. D. Mora, A. Pifferi, D. Contini, G. Boso, A. Tosi, L. Hervé, A. Planat-Chrétien, A. Koenig, and J.-M. Dinten, “Time-resolved diffuse optical tomography using fast-gated single-photon avalanche diodes,” Biomed. Opt. Express 4(8), 1351–1365 (2013).
[Crossref] [PubMed]

L. Spinelli, M. Botwicz, N. Zolek, M. Kacprzak, D. Milej, P. Sawosz, A. Liebert, U. Weigel, T. Durduran, F. Foschum, A. Kienle, F. Baribeau, S. Leclair, J.-P. Bouchard, I. Noiseux, P. Gallant, O. Mermut, A. Farina, A. Pifferi, A. Torricelli, R. Cubeddu, H.-C. Ho, M. Mazurenka, H. Wabnitz, K. Klauenberg, O. Bodnar, C. Elster, M. Bénazech-Lavoué, Y. Bérubé-Lauzière, F. Lesage, D. Khoptyar, A. A. Subash, S. Andersson-Engels, P. Di Ninni, F. Martelli, and G. Zaccanti, “Determination of reference values for optical properties of liquid phantoms based on Intralipid and India ink,” Biomed. Opt. Express 5(7), 2037–2053 (2014).
[Crossref] [PubMed]

G. Quarto, L. Spinelli, A. Pifferi, A. Torricelli, R. Cubeddu, F. Abbate, N. Balestreri, S. Menna, E. Cassano, and P. Taroni, “Estimate of tissue composition in malignant and benign breast lesions by time-domain optical mammography,” Biomed. Opt. Express 5(10), 3684–3698 (2014).
[Crossref] [PubMed]

C. D’Andrea, N. Ducros, A. Bassi, S. Arridge, and G. Valentini, “Fast 3D optical reconstruction in turbid media using spatially modulated light,” Biomed. Opt. Express 1(2), 471–481 (2010).
[Crossref] [PubMed]

Inverse Probl. (2)

S. R. Arridge, “Optical tomography in medical imaging,” Inverse Probl. 15(2), R41–R93 (1999).
[Crossref]

S. R. Arridge and J. C. Schotland, “Optical tomography: forward and inverse problems,” Inverse Probl. 25(12), 123010 (2009).
[Crossref]

J. Biomed. Opt. (7)

S. Srinivasan, B. W. Pogue, H. Dehghani, S. Jiang, X. Song, and K. D. Paulsen, “Improved quantification of small objects in near-infrared diffuse optical tomography,” J. Biomed. Opt. 9(6), 1161–1171 (2004).
[Crossref] [PubMed]

Z. Yuan, Q. Zhang, E. S. Sobel, and H. Jiang, “Tomographic x-ray-guided three-dimensional diffuse optical tomography of osteoarthritis in the finger joints,” J. Biomed. Opt. 13(4), 044006 (2008).
[Crossref] [PubMed]

L. Di Sieno, G. Bettega, M. Berger, C. Hamou, M. Aribert, A. D. Mora, A. Puszka, H. Grateau, D. Contini, L. Hervé, J.-L. Coll, J.-M. Dinten, A. Pifferi, and A. Planat-Chrétien, “Toward noninvasive assessment of flap viability with time-resolved diffuse optical tomography: a preclinical test on rats,” J. Biomed. Opt. 21(2), 025004 (2016).
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F. Martelli, A. Pifferi, D. Contini, L. Spinelli, A. Torricelli, H. Wabnitz, R. Macdonald, A. Sassaroli, and G. Zaccanti, “Phantoms for diffuse optical imaging based on totally absorbing objects, part 1: Basic concepts,” J. Biomed. Opt. 18(6), 066014 (2013).
[Crossref] [PubMed]

S. C. Davis, B. W. Pogue, H. Dehghani, and K. D. Paulsen, “Contrast-detail analysis characterizing diffuse optical fluorescence tomography image reconstruction,” J. Biomed. Opt. 10(5), 050501 (2005).
[Crossref] [PubMed]

H. Wabnitz, D. R. Taubert, M. Mazurenka, O. Steinkellner, A. Jelzow, R. Macdonald, D. Milej, P. Sawosz, M. Kacprzak, A. Liebert, R. Cooper, J. Hebden, A. Pifferi, A. Farina, I. Bargigia, D. Contini, M. Caffini, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Torricelli, “Performance assessment of time-domain optical brain imagers, part 1: basic instrumental performance protocol,” J. Biomed. Opt. 19(8), 086010 (2014).
[Crossref] [PubMed]

H. Wabnitz, A. Jelzow, M. Mazurenka, O. Steinkellner, R. Macdonald, D. Milej, N. Żołek, M. Kacprzak, P. Sawosz, R. Maniewski, A. Liebert, S. Magazov, J. Hebden, F. Martelli, P. Di Ninni, G. Zaccanti, A. Torricelli, D. Contini, R. Re, L. Zucchelli, L. Spinelli, R. Cubeddu, and A. Pifferi, “Performance assessment of time-domain optical brain imagers, part 2: nEUROPt protocol,” J. Biomed. Opt. 19(8), 086012 (2014).
[Crossref] [PubMed]

J. Cereb. Blood Flow Metab. (1)

J. P. Culver, T. Durduran, D. Furuya, C. Cheung, J. H. Greenberg, and A. G. Yodh, “Diffuse optical tomography of cerebral blood flow, oxygenation, and metabolism in rat during focal ischemia,” J. Cereb. Blood Flow Metab. 23(8), 911–924 (2003).
[Crossref] [PubMed]

J. Near Infrared Spectrosc. (1)

Med. Phys. (1)

J. P. Culver, R. Choe, M. J. Holboke, L. Zubkov, T. Durduran, A. Slemp, V. Ntziachristos, B. Chance, and A. G. Yodh, “Three-dimensional diffuse optical tomography in the parallel plane transmission geometry: evaluation of a hybrid frequency domain/continuous wave clinical system for breast imaging,” Med. Phys. 30(2), 235–247 (2003).
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A. T. Eggebrecht, S. L. Ferradal, A. Robichaux-Viehoever, M. S. Hassanpour, H. Dehghani, A. Z. Snyder, T. Hershey, and J. P. Culver, “Mapping distributed brain function and networks with diffuse optical tomography,” Nat. Photonics 8(6), 448–454 (2014).
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B. W. Pogue, S. C. Davis, F. Leblond, M. A. Mastanduno, H. Dehghani, and K. D. Paulsen, “Implicit and explicit prior information in near-infrared spectral imaging: accuracy, quantification and diagnostic value,” Philos Trans A 369(1955), 4531–4557 (2011).
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N. Ducros, C. D’Andrea, A. Bassi, G. Valentini, and S. Arridge, “A virtual source pattern method for fluorescence tomography with structured light,” Phys. Med. Biol. 57(12), 3811–3832 (2012).
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Phys. Rev. Lett. (2)

A. Pifferi, A. Torricelli, L. Spinelli, D. Contini, R. Cubeddu, F. Martelli, G. Zaccanti, A. Tosi, A. Dalla Mora, F. Zappa, and S. Cova, “Time-Resolved Diffuse Reflectance Using Small Source-Detector Separation and Fast Single-Photon Gating,” Phys. Rev. Lett. 100(13), 138101 (2008).
[Crossref] [PubMed]

A. Torricelli, A. Pifferi, L. Spinelli, R. Cubeddu, F. Martelli, S. Del Bianco, and G. Zaccanti, “Time-Resolved Reflectance At Null Source-Detector Separation: Improving Contrast and Resolution In Diffuse Optical Imaging,” Phys. Rev. Lett. 95(7), 078101 (2005).
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P.-Y. Lin, K. Hagan, A. Fenoglio, P. E. Grant, and M. A. Franceschini, “Reduced cerebral blood flow and oxygen metabolism in extremely preterm neonates with low-grade germinal matrix- intraventricular hemorrhage,” Sci. Rep. 6, 25903 (2016).
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G. Boso, A. Dalla Mora, A. Della Frera, and A. Tosi, “Fast-gating of single-photon avalanche diodes with 200ps transitions and 30ps timing jitter,” Sens. Actuators A Phys. 191, 61–67 (2013).
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Figures (7)

Fig. 1
Fig. 1 (a) Geometry of the scan x-y of both source-detector distances. The source (yellow circle) scan the yellow area. The grey disc corresponds to the position of the inclusion (x = 0 cm. y = 0 cm). The crosses are the detection positions of the couple of detector optical fibers at 1.5 cm (blue) and 3.0 cm (green) distance from the source. Each black dot is separated by 0.75 cm in both directions. (b) Instrumental setup with the phantom containing an absorbing object (detailed in section 2.2).
Fig. 2
Fig. 2 Numerical and experimental 3D reconstruction absorption maps with non-gated SPADs at 3.0 cm source-detector distance represented in a vertical (z-y) and a horizontal (y-x) slices both passing through the expected center of the inclusion (x = 0, y = 0 and z = 1.0 cm). From top to bottom, the 4 inclusion sizes are shown (see Table 1 for equivalent δμa). The black circle corresponds to a 1 cm3 sphere and is centered on the expected position of the inclusion.
Fig. 3
Fig. 3 Numerical and experimental 3D reconstruction absorption maps with non-gated SPADs at 3.0 cm source-detector distance represented in a vertical (z-y) and a horizontal (y-x) slices both passing through the expected center of the inclusion “size 2” (equivalent δμa = 0.087 cm−1). From top to bottom, the 3 depths are shown. The black circle corresponds to a 1 cm3 sphere and is centered on the expected position of the inclusion (x = 0, y = 0 and given depth).
Fig. 4
Fig. 4 Overview of quantified plots of δμavol, the integral variation in absorption coefficient over a 1 cm3 spherical volume, in the different configurations: with small or large source-detector distance (ρ) (columns), by using two non-gated or gated SPADs (rows), in simulation and experiment, at 1.0, 1.5 or 2.0 cm depth and with each inclusion. The black curves correspond to the expected values δμa of each inclusion. The dotted curves correspond to the simulation curves and the continuous curves correspond to the experimental curves.
Fig. 5
Fig. 5 With constrained method, quantified plots of δμa in the different configurations: with small or large source-detector distance (ρ) (columns), by using two non-gated or gated SPADs (rows), in simulation and experiment, at 1.0, 1.5 or 2.0 cm depth and with each inclusion. The black curves correspond to the expected values δμa of each inclusion. The dotted curves correspond to the simulation curves and the continuous curves correspond to the experimental data.
Fig. 6
Fig. 6 Relative errors in percent (%) of δμavol between (a) simulation and theory (Sim/Th) and (b) experiment and theory (Exp/Th) calculated with Eq. (7) for each reconstruction in each configuration (ρ = 1.5 or 3.0 cm and Non Gated (NG) or Gated (G) SPAD). Colors encode depth while the filling gated or not and the color intensity the ρ.
Fig. 7
Fig. 7 [Constrained method] Relative errors in percent (%) of δμa between (a) simulation and theory (Sim/Th) and (b) experiment and theory (Exp/Th) calculated with Eq. (7) for each reconstruction in each configuration (ρ = 1.5 or 3.0 cm and Non Gated (NG) or Gated (G) SPAD). Colors encode depth while the filling Gated or Not Gated and the color intensity the ρ.

Tables (3)

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Table 1 Summary of the 4 totally absorbing cylinders of various sizes with diameters, heights, corresponding volumes and the equivalent absorption perturbations in a region corresponding of a sphere of 1 cm3 [28].

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Table 2 Coefficients of the polynomial fit of reconstructed δμavol vs. δμatrue as defined in Section 3 for Non Gated (NG) and Gated (G) SPAD modes.

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Table 3 [Constrained method] Coefficients of the polynomial fit of reconstructed δμavol vs. δμatrue as defined in Section 3 for Non Gated (NG) and Gated (G) SPAD modes.

Equations (10)

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ϕ ( r , t ) c t . ( D ( r ) ϕ ( r , t ) ) + μ a ( r ) ϕ ( r , t ) = S ( r , t )
δ G s d ( t ) = Ω G s ( r , t ) * δ μ a ( r ) * G d ( r , t ) d r
Y s d ( k ) = M s d B ( t ) * G s d A ( t ) M s d A ( t ) * G s d B ( k ) ( t ) = M s d A ( t ) * Ω G s ( k ) ( t ) * δ μ a ( k ) * G d ( k ) ( t ) d r
MLT (p,n) [ f(t) ] = f (p,n) = 0 + f ( t ) ( p t ) n n ! e ( p t ) d t
Y s d ( p , n ) ( k ) = m W s d , m ( p , n ) ( k ) δ μ a , m ( k )
χ 2 = L ( Y W R X ) 2
ε i = δ μ a , i v o l δ μ a , i t r u e δ μ a , i t r u e
y = a x 2 + b x + c
s l o p e = 2 a x + b
N L = 2 a b Δ x

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