Abstract

We investigate the dynamics of a vesicle suspension under shear flow between plates using DHM with a spatially reduced coherent source. Holograms are grabbed at a frequency of 24 frames/sec. The distribution of the vesicle suspension is obtained after numerical processing of the digital holograms sequence resulting in a 4D distribution. Obtaining this distribution is not straightforward and requires special processing to automate the analysis. We present an original method that fully automates the analysis and provides distributions that are further analyzed to extract physical properties of the fluid. Details of the numerical implementation, as well as sample experimental results are presented.

© 2014 Optical Society of America

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2014 (2)

P.-Y. Gires, A. Srivastav, C. Misbah, T. Podgorski, and G. Coupier, “Pairwise hydrodynamic interactions and diffusion in a vesicle suspension,” Phys. Fluids26(1), 013304 (2014).
[CrossRef]

C. Minetti and C. Buffone, “Three-dimensional Marangoni cell in self-induced evaporating cooling unveiled by digital holographic microscopy,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys.89(1), 013007 (2014).
[CrossRef] [PubMed]

2013 (9)

A. Farutin and C. Misbah, “Analytical and Numerical Study of Three Main Migration Laws for Vesicles Under Flow,” Phys. Rev. Lett.110(10), 108104 (2013).
[CrossRef] [PubMed]

D. Abreu and U. Seifert, “Noisy Nonlinear Dynamics of Vesicles in Flow,” Phys. Rev. Lett.110(23), 238103 (2013).
[CrossRef]

H. Zhao and E. S. G. Shaqfeh, “The dynamics of a non-dilute vesicle suspension in a simple shear flow,” J. Fluid Mech.725, 709–731 (2013).
[CrossRef]

X. Grandchamp, G. Coupier, A. Srivastav, C. Minetti, and T. Podgorski, “Lift and down-gradient shear-induced diffusion in red blood cell suspensions,” Phys. Rev. Lett.110(10), 108101 (2013).
[CrossRef] [PubMed]

A. El Mallahi and F. Dubois, “Separation of overlapped particles in digital holographic microscopy,” Opt. Express21(5), 6466–6479 (2013).
[CrossRef] [PubMed]

D. R. Guildenbecher, J. Gao, P. L. Reu, and J. Chen, “Digital holography simulations and experiments to quantify the accuracy of 3D particle location and 2D sizing using a proposed hybrid method,” Appl. Opt.52(16), 3790–3801 (2013).
[CrossRef] [PubMed]

J. Gao, D. R. Guildenbecher, P. L. Reu, and J. Chen, “Uncertainty characterization of particle depth measurement using digital in-line holography and the hybrid method,” Opt. Express21(22), 26432–26449 (2013).
[CrossRef] [PubMed]

I. Moon, F. Yi, Y. H. Lee, B. Javidi, D. Boss, and P. Marquet, “Automated quantitative analysis of 3D morphology and mean corpuscular hemoglobin in human red blood cells stored in different periods,” Opt. Express21(25), 30947–30957 (2013).
[CrossRef] [PubMed]

A. El Mallahi, C. Minetti, and F. Dubois, “Automated three-dimensional detection and classification of living organisms using digital holographic microscopy with partial spatial coherent source: Application to the monitoring of drinking water resources,” Appl. Opt.52(1), A68–A80 (2013).
[CrossRef] [PubMed]

2012 (9)

P. Memmolo, M. Iannone, M. Ventre, P. A. Netti, A. Finizio, M. Paturzo, and P. Ferraro, “On the holographic 3D tracking of in vitro cells characterized by a highly-morphological change,” Opt. Express20(27), 28485–28493 (2012).
[CrossRef] [PubMed]

Y. Yang, G. Li, L. Tang, and L. Huang, “Integrated gray-level gradient method applied for the extraction of three-dimensional velocity fields of sprays in in-line digital holography,” Appl. Opt.51(2), 255–267 (2012).
[CrossRef] [PubMed]

I. Moon, B. Javidi, F. Yi, D. Boss, and P. Marquet, “Automated statistical quantification of three-dimensional morphology and mean corpuscular hemoglobin of multiple red blood cells,” Opt. Express20(9), 10295–10309 (2012).
[CrossRef] [PubMed]

A. Srivastav, T. Podgorski, and G. Coupier, “Efficiency of size-dependent particle separation by pinched flow fractionation,” Microfluid. Nanofluid.13(5), 697–701 (2012).
[CrossRef]

A. Farutin and C. Misbah, “Squaring, Parity Breaking, and S Tumbling of Vesicles under Shear Flow,” Phys. Rev. Lett.109(24), 248106 (2012).
[CrossRef] [PubMed]

A. Farutin and C. Misbah, “Rheology of vesicle suspensions under combined steady and oscillating shear flows,” J. Fluid Mech.700, 362–381 (2012).
[CrossRef]

G. Boedec, M. Jaeger, and M. Leonetti, “Settling of a vesicle in the limit of quasispherical shapes,” J. Fluid Mech.690, 227–261 (2012).
[CrossRef]

G. Coupier, A. Farutin, C. Minetti, T. Podgorski, and C. Misbah, “Shape Diagram of Vesicles in Poiseuille Flow,” Phys. Rev. Lett.108(17), 178106 (2012).
[CrossRef] [PubMed]

M. Levant, J. Deschamps, E. Afik, and V. Steinberg, “Characteristic spatial scale of vesicle pair interactions in a plane linear flow,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys.85(5), 056306 (2012).
[CrossRef] [PubMed]

2011 (6)

H. Zhao, A. Spann, and E. S. G. Shaqfeh, “The dynamics of a vesicle in a wall-bound shear flow,” Phys. Fluids23(12), 121901 (2011).
[CrossRef]

T. Biben, A. Farutin, and C. Misbah, “Three-dimensional vesicles under shear flow: Numerical study of dynamics and phase diagram,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys.83(3), 031921 (2011).
[CrossRef] [PubMed]

T. Podgorski, N. Callens, C. Minetti, G. Coupier, F. Dubois, and C. Misbah, “Dynamics of vesicle suspension in shear flow between walls,” Microgravity Sci. Technol.23(2), 263–270 (2011).
[CrossRef]

L. Miccio, A. Finizio, R. Puglisi, D. Balduzzi, A. Galli, and P. Ferraro, “Dynamic DIC by digital holography microscopy for enhancing phase-contrast visualization,” Biomed. Opt. Express2(2), 331–344 (2011).
[CrossRef] [PubMed]

A. El Mallahi and F. Dubois, “Dependency and precision of the refocusing criterion based on amplitude analysis in digital holographic microscopy,” Opt. Express19(7), 6684–6698 (2011).
[CrossRef] [PubMed]

R. Liu, D. K. Dey, D. Boss, P. Marquet, and B. Javidi, “Recognition and classification of red blood cells using digital holographic microscopy and data clustering with discriminant analysis,” J. Opt. Soc. Am. A28(6), 1204–1210 (2011).
[CrossRef] [PubMed]

2010 (1)

H. Noguchi, G. Gompper, L. Schmid, A. Wixforth, and T. Franke, “Dynamics of fluid vesicles in flow through structured microchannels,” Europhys. Lett.89(2), 28002 (2010).
[CrossRef]

2009 (4)

J. Deschamps, V. Kantsler, and V. Steinberg, “Phase Diagram of Single Vesicle Dynamical States in Shear Flow,” Phys. Rev. Lett.102(11), 118105 (2009).
[CrossRef] [PubMed]

J. Deschamps, V. Kantsler, E. Segre, and V. Steinberg, “Dynamics of a vesicle in general flow,” Proc. Natl. Acad. Sci. U.S.A.106(28), 11444–11447 (2009).
[CrossRef] [PubMed]

B. Kaoui, G. Biros, and C. Misbah, “Why Do Red Blood Cells Have Asymmetric Shapes Even in a Symmetric Flow?” Phys. Rev. Lett.103(18), 188101 (2009).
[CrossRef] [PubMed]

Y.-S. Choi and S.-J. Lee, “Three-dimensional volumetric measurement of red blood cell motion using digital holographic microscopy,” Appl. Opt.48(16), 2983–2990 (2009).
[CrossRef] [PubMed]

2008 (5)

C. Minetti, N. Callens, G. Coupier, T. Podgorski, and F. Dubois, “Fast measurements of concentration profiles inside deformable objects in microflows with reduced spatial coherence digital holography,” Appl. Opt.47(29), 5305–5314 (2008).
[CrossRef] [PubMed]

V. Vitkova, M.-A. Mader, B. Polack, C. Misbah, and T. Podgorski, “Micro-macro link in rheology of erythrocyte and vesicle suspensions,” Biophys. J.95(6), L33–L35 (2008).
[CrossRef] [PubMed]

V. Kantsler, E. Segre, and V. Steinberg, “Dynamics of interacting vesicles and rheology of vesicle suspension in shear flow,” Europhys. Lett.82(5), 58005 (2008).
[CrossRef]

G. Coupier, B. Kaoui, T. Podgorski, and C. Misbah, “Noninertial lateral migration of vesicles in bounded Poiseuille flow,” Phys. Fluids20(11), 111702 (2008).
[CrossRef]

N. Callens, C. Minetti, G. Coupier, M.-A. Mader, F. Dubois, C. Misbah, and T. Podgorski, “Hydrodynamical lift of vesicles undear shear flow in microgravity,” Europhys. Lett.83(2), 24002 (2008).
[CrossRef]

2007 (2)

V. V. Lebedev, K. S. Turitsyn, and S. S. Vergeles, “Dynamics of Nearly Spherical Vesicles in an External Flow,” Phys. Rev. Lett.99(21), 218101 (2007).
[CrossRef] [PubMed]

G. Danker and C. Misbah, “Rheology of a Dilute Suspension of Vesicles,” Phys. Rev. Lett.98(8), 088104 (2007).
[CrossRef] [PubMed]

2006 (3)

2005 (2)

2004 (3)

2002 (2)

F. Dubois, O. Monnom, C. Yourassowsky, and J.-C. Legros, “Border processing in digital holography by extension of the digital hologram and reduction of the higher spatial frequencies,” Appl. Opt.41(14), 2621–2626 (2002).
[CrossRef] [PubMed]

M. Abkarian, C. Lartigue, and A. Viallat, “Tank Treading and Unbinding of Deformable Vesicles in Shear Flow: Determination of the Lift Force,” Phys. Rev. Lett.88(6), 068103 (2002).
[CrossRef] [PubMed]

1999 (1)

1997 (2)

K. H. de Haas, C. Blom, D. van den Ende, M. H. G. Duits, B. Haveman, and J. Mellema, “Rheological behavior of a dispersion of small lipid bilayer vesicles,” Langmuir13(25), 6658–6668 (1997).
[CrossRef]

P. Olla, “The Lift on a Tank-Treading Ellipsoidal Cell in a Shear Flow,” J. Phys. II7(10), 1533–1540 (1997).
[CrossRef]

1996 (1)

F. Da Cunha and E. Hinch, “Shear-induced dispersion in a dilute suspension of rough spheres,” J. Fluid Mech.309(-1), 211–223 (1996).
[CrossRef]

1992 (1)

M. I. Angelova, S. Soleau, P. Meleard, J.-F. Faucon, and P. Bothorel, “Preparation of giant vesicles by external A.C. electric fields. Kinetics and applications,” Prog. Colloid Polym. Sci.89, 127 (1992).

1989 (1)

D. Mumford and J. Shah, “Optimal approximation by piece-wise smooth functions and associated variational problems,” Commun. Pure Appl. Math.42(5), 577–685 (1989).
[CrossRef]

1986 (1)

1982 (1)

1959 (1)

R. E. Pattle, “Diffusion from an instantaneous point source with a concentration-dependent coefficient,” Q. J. Mech. Appl. Math.12(4), 407–409 (1959).
[CrossRef]

Abkarian, M.

M. Abkarian, C. Lartigue, and A. Viallat, “Tank Treading and Unbinding of Deformable Vesicles in Shear Flow: Determination of the Lift Force,” Phys. Rev. Lett.88(6), 068103 (2002).
[CrossRef] [PubMed]

Abreu, D.

D. Abreu and U. Seifert, “Noisy Nonlinear Dynamics of Vesicles in Flow,” Phys. Rev. Lett.110(23), 238103 (2013).
[CrossRef]

Afik, E.

M. Levant, J. Deschamps, E. Afik, and V. Steinberg, “Characteristic spatial scale of vesicle pair interactions in a plane linear flow,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys.85(5), 056306 (2012).
[CrossRef] [PubMed]

Alferi, D.

Angelova, M. I.

M. I. Angelova, S. Soleau, P. Meleard, J.-F. Faucon, and P. Bothorel, “Preparation of giant vesicles by external A.C. electric fields. Kinetics and applications,” Prog. Colloid Polym. Sci.89, 127 (1992).

Aspert, N.

Balduzzi, D.

Biben, T.

T. Biben, A. Farutin, and C. Misbah, “Three-dimensional vesicles under shear flow: Numerical study of dynamics and phase diagram,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys.83(3), 031921 (2011).
[CrossRef] [PubMed]

Biros, G.

B. Kaoui, G. Biros, and C. Misbah, “Why Do Red Blood Cells Have Asymmetric Shapes Even in a Symmetric Flow?” Phys. Rev. Lett.103(18), 188101 (2009).
[CrossRef] [PubMed]

Blom, C.

K. H. de Haas, C. Blom, D. van den Ende, M. H. G. Duits, B. Haveman, and J. Mellema, “Rheological behavior of a dispersion of small lipid bilayer vesicles,” Langmuir13(25), 6658–6668 (1997).
[CrossRef]

Boedec, G.

G. Boedec, M. Jaeger, and M. Leonetti, “Settling of a vesicle in the limit of quasispherical shapes,” J. Fluid Mech.690, 227–261 (2012).
[CrossRef]

Boss, D.

Bothorel, P.

M. I. Angelova, S. Soleau, P. Meleard, J.-F. Faucon, and P. Bothorel, “Preparation of giant vesicles by external A.C. electric fields. Kinetics and applications,” Prog. Colloid Polym. Sci.89, 127 (1992).

Bourquin, S.

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C. Minetti and C. Buffone, “Three-dimensional Marangoni cell in self-induced evaporating cooling unveiled by digital holographic microscopy,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys.89(1), 013007 (2014).
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T. Podgorski, N. Callens, C. Minetti, G. Coupier, F. Dubois, and C. Misbah, “Dynamics of vesicle suspension in shear flow between walls,” Microgravity Sci. Technol.23(2), 263–270 (2011).
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N. Callens, C. Minetti, G. Coupier, M.-A. Mader, F. Dubois, C. Misbah, and T. Podgorski, “Hydrodynamical lift of vesicles undear shear flow in microgravity,” Europhys. Lett.83(2), 24002 (2008).
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C. Minetti, N. Callens, G. Coupier, T. Podgorski, and F. Dubois, “Fast measurements of concentration profiles inside deformable objects in microflows with reduced spatial coherence digital holography,” Appl. Opt.47(29), 5305–5314 (2008).
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F. Dubois, C. Schockaert, N. Callens, and C. Yourassowsky, “Focus plane detection criteria in digital holography microscopy by amplitude analysis,” Opt. Express14(13), 5895–5908 (2006).
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P.-Y. Gires, A. Srivastav, C. Misbah, T. Podgorski, and G. Coupier, “Pairwise hydrodynamic interactions and diffusion in a vesicle suspension,” Phys. Fluids26(1), 013304 (2014).
[CrossRef]

X. Grandchamp, G. Coupier, A. Srivastav, C. Minetti, and T. Podgorski, “Lift and down-gradient shear-induced diffusion in red blood cell suspensions,” Phys. Rev. Lett.110(10), 108101 (2013).
[CrossRef] [PubMed]

G. Coupier, A. Farutin, C. Minetti, T. Podgorski, and C. Misbah, “Shape Diagram of Vesicles in Poiseuille Flow,” Phys. Rev. Lett.108(17), 178106 (2012).
[CrossRef] [PubMed]

A. Srivastav, T. Podgorski, and G. Coupier, “Efficiency of size-dependent particle separation by pinched flow fractionation,” Microfluid. Nanofluid.13(5), 697–701 (2012).
[CrossRef]

T. Podgorski, N. Callens, C. Minetti, G. Coupier, F. Dubois, and C. Misbah, “Dynamics of vesicle suspension in shear flow between walls,” Microgravity Sci. Technol.23(2), 263–270 (2011).
[CrossRef]

N. Callens, C. Minetti, G. Coupier, M.-A. Mader, F. Dubois, C. Misbah, and T. Podgorski, “Hydrodynamical lift of vesicles undear shear flow in microgravity,” Europhys. Lett.83(2), 24002 (2008).
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C. Minetti, N. Callens, G. Coupier, T. Podgorski, and F. Dubois, “Fast measurements of concentration profiles inside deformable objects in microflows with reduced spatial coherence digital holography,” Appl. Opt.47(29), 5305–5314 (2008).
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G. Coupier, B. Kaoui, T. Podgorski, and C. Misbah, “Noninertial lateral migration of vesicles in bounded Poiseuille flow,” Phys. Fluids20(11), 111702 (2008).
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G. Danker and C. Misbah, “Rheology of a Dilute Suspension of Vesicles,” Phys. Rev. Lett.98(8), 088104 (2007).
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K. H. de Haas, C. Blom, D. van den Ende, M. H. G. Duits, B. Haveman, and J. Mellema, “Rheological behavior of a dispersion of small lipid bilayer vesicles,” Langmuir13(25), 6658–6668 (1997).
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M. Levant, J. Deschamps, E. Afik, and V. Steinberg, “Characteristic spatial scale of vesicle pair interactions in a plane linear flow,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys.85(5), 056306 (2012).
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J. Deschamps, V. Kantsler, and V. Steinberg, “Phase Diagram of Single Vesicle Dynamical States in Shear Flow,” Phys. Rev. Lett.102(11), 118105 (2009).
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J. Deschamps, V. Kantsler, E. Segre, and V. Steinberg, “Dynamics of a vesicle in general flow,” Proc. Natl. Acad. Sci. U.S.A.106(28), 11444–11447 (2009).
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Dubois, F.

A. El Mallahi, C. Minetti, and F. Dubois, “Automated three-dimensional detection and classification of living organisms using digital holographic microscopy with partial spatial coherent source: Application to the monitoring of drinking water resources,” Appl. Opt.52(1), A68–A80 (2013).
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A. El Mallahi and F. Dubois, “Separation of overlapped particles in digital holographic microscopy,” Opt. Express21(5), 6466–6479 (2013).
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T. Podgorski, N. Callens, C. Minetti, G. Coupier, F. Dubois, and C. Misbah, “Dynamics of vesicle suspension in shear flow between walls,” Microgravity Sci. Technol.23(2), 263–270 (2011).
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N. Callens, C. Minetti, G. Coupier, M.-A. Mader, F. Dubois, C. Misbah, and T. Podgorski, “Hydrodynamical lift of vesicles undear shear flow in microgravity,” Europhys. Lett.83(2), 24002 (2008).
[CrossRef]

C. Minetti, N. Callens, G. Coupier, T. Podgorski, and F. Dubois, “Fast measurements of concentration profiles inside deformable objects in microflows with reduced spatial coherence digital holography,” Appl. Opt.47(29), 5305–5314 (2008).
[CrossRef] [PubMed]

F. Dubois, C. Schockaert, N. Callens, and C. Yourassowsky, “Focus plane detection criteria in digital holography microscopy by amplitude analysis,” Opt. Express14(13), 5895–5908 (2006).
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A. Farutin and C. Misbah, “Analytical and Numerical Study of Three Main Migration Laws for Vesicles Under Flow,” Phys. Rev. Lett.110(10), 108104 (2013).
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A. Farutin and C. Misbah, “Rheology of vesicle suspensions under combined steady and oscillating shear flows,” J. Fluid Mech.700, 362–381 (2012).
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A. Farutin and C. Misbah, “Squaring, Parity Breaking, and S Tumbling of Vesicles under Shear Flow,” Phys. Rev. Lett.109(24), 248106 (2012).
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G. Coupier, A. Farutin, C. Minetti, T. Podgorski, and C. Misbah, “Shape Diagram of Vesicles in Poiseuille Flow,” Phys. Rev. Lett.108(17), 178106 (2012).
[CrossRef] [PubMed]

T. Biben, A. Farutin, and C. Misbah, “Three-dimensional vesicles under shear flow: Numerical study of dynamics and phase diagram,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys.83(3), 031921 (2011).
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M. I. Angelova, S. Soleau, P. Meleard, J.-F. Faucon, and P. Bothorel, “Preparation of giant vesicles by external A.C. electric fields. Kinetics and applications,” Prog. Colloid Polym. Sci.89, 127 (1992).

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Finizio, A.

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H. Noguchi, G. Gompper, L. Schmid, A. Wixforth, and T. Franke, “Dynamics of fluid vesicles in flow through structured microchannels,” Europhys. Lett.89(2), 28002 (2010).
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Gao, J.

Gires, P.-Y.

P.-Y. Gires, A. Srivastav, C. Misbah, T. Podgorski, and G. Coupier, “Pairwise hydrodynamic interactions and diffusion in a vesicle suspension,” Phys. Fluids26(1), 013304 (2014).
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H. Noguchi, G. Gompper, L. Schmid, A. Wixforth, and T. Franke, “Dynamics of fluid vesicles in flow through structured microchannels,” Europhys. Lett.89(2), 28002 (2010).
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X. Grandchamp, G. Coupier, A. Srivastav, C. Minetti, and T. Podgorski, “Lift and down-gradient shear-induced diffusion in red blood cell suspensions,” Phys. Rev. Lett.110(10), 108101 (2013).
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Haveman, B.

K. H. de Haas, C. Blom, D. van den Ende, M. H. G. Duits, B. Haveman, and J. Mellema, “Rheological behavior of a dispersion of small lipid bilayer vesicles,” Langmuir13(25), 6658–6668 (1997).
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J. Deschamps, V. Kantsler, and V. Steinberg, “Phase Diagram of Single Vesicle Dynamical States in Shear Flow,” Phys. Rev. Lett.102(11), 118105 (2009).
[CrossRef] [PubMed]

J. Deschamps, V. Kantsler, E. Segre, and V. Steinberg, “Dynamics of a vesicle in general flow,” Proc. Natl. Acad. Sci. U.S.A.106(28), 11444–11447 (2009).
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V. Kantsler, E. Segre, and V. Steinberg, “Dynamics of interacting vesicles and rheology of vesicle suspension in shear flow,” Europhys. Lett.82(5), 58005 (2008).
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B. Kaoui, G. Biros, and C. Misbah, “Why Do Red Blood Cells Have Asymmetric Shapes Even in a Symmetric Flow?” Phys. Rev. Lett.103(18), 188101 (2009).
[CrossRef] [PubMed]

G. Coupier, B. Kaoui, T. Podgorski, and C. Misbah, “Noninertial lateral migration of vesicles in bounded Poiseuille flow,” Phys. Fluids20(11), 111702 (2008).
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G. Boedec, M. Jaeger, and M. Leonetti, “Settling of a vesicle in the limit of quasispherical shapes,” J. Fluid Mech.690, 227–261 (2012).
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M. Levant, J. Deschamps, E. Afik, and V. Steinberg, “Characteristic spatial scale of vesicle pair interactions in a plane linear flow,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys.85(5), 056306 (2012).
[CrossRef] [PubMed]

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Liu, R.

Mader, M.-A.

V. Vitkova, M.-A. Mader, B. Polack, C. Misbah, and T. Podgorski, “Micro-macro link in rheology of erythrocyte and vesicle suspensions,” Biophys. J.95(6), L33–L35 (2008).
[CrossRef] [PubMed]

N. Callens, C. Minetti, G. Coupier, M.-A. Mader, F. Dubois, C. Misbah, and T. Podgorski, “Hydrodynamical lift of vesicles undear shear flow in microgravity,” Europhys. Lett.83(2), 24002 (2008).
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M. I. Angelova, S. Soleau, P. Meleard, J.-F. Faucon, and P. Bothorel, “Preparation of giant vesicles by external A.C. electric fields. Kinetics and applications,” Prog. Colloid Polym. Sci.89, 127 (1992).

Mellema, J.

K. H. de Haas, C. Blom, D. van den Ende, M. H. G. Duits, B. Haveman, and J. Mellema, “Rheological behavior of a dispersion of small lipid bilayer vesicles,” Langmuir13(25), 6658–6668 (1997).
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Miccio, L.

Minetti, C.

C. Minetti and C. Buffone, “Three-dimensional Marangoni cell in self-induced evaporating cooling unveiled by digital holographic microscopy,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys.89(1), 013007 (2014).
[CrossRef] [PubMed]

X. Grandchamp, G. Coupier, A. Srivastav, C. Minetti, and T. Podgorski, “Lift and down-gradient shear-induced diffusion in red blood cell suspensions,” Phys. Rev. Lett.110(10), 108101 (2013).
[CrossRef] [PubMed]

A. El Mallahi, C. Minetti, and F. Dubois, “Automated three-dimensional detection and classification of living organisms using digital holographic microscopy with partial spatial coherent source: Application to the monitoring of drinking water resources,” Appl. Opt.52(1), A68–A80 (2013).
[CrossRef] [PubMed]

G. Coupier, A. Farutin, C. Minetti, T. Podgorski, and C. Misbah, “Shape Diagram of Vesicles in Poiseuille Flow,” Phys. Rev. Lett.108(17), 178106 (2012).
[CrossRef] [PubMed]

T. Podgorski, N. Callens, C. Minetti, G. Coupier, F. Dubois, and C. Misbah, “Dynamics of vesicle suspension in shear flow between walls,” Microgravity Sci. Technol.23(2), 263–270 (2011).
[CrossRef]

N. Callens, C. Minetti, G. Coupier, M.-A. Mader, F. Dubois, C. Misbah, and T. Podgorski, “Hydrodynamical lift of vesicles undear shear flow in microgravity,” Europhys. Lett.83(2), 24002 (2008).
[CrossRef]

C. Minetti, N. Callens, G. Coupier, T. Podgorski, and F. Dubois, “Fast measurements of concentration profiles inside deformable objects in microflows with reduced spatial coherence digital holography,” Appl. Opt.47(29), 5305–5314 (2008).
[CrossRef] [PubMed]

F. Dubois, M. L. Requena, C. Minetti, O. Monnom, and E. Istasse, “Partial spatial coherence effects in digital holographic microscopy with a laser source,” Appl. Opt.43(5), 1131–1139 (2004).
[CrossRef] [PubMed]

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P.-Y. Gires, A. Srivastav, C. Misbah, T. Podgorski, and G. Coupier, “Pairwise hydrodynamic interactions and diffusion in a vesicle suspension,” Phys. Fluids26(1), 013304 (2014).
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A. Farutin and C. Misbah, “Analytical and Numerical Study of Three Main Migration Laws for Vesicles Under Flow,” Phys. Rev. Lett.110(10), 108104 (2013).
[CrossRef] [PubMed]

A. Farutin and C. Misbah, “Rheology of vesicle suspensions under combined steady and oscillating shear flows,” J. Fluid Mech.700, 362–381 (2012).
[CrossRef]

G. Coupier, A. Farutin, C. Minetti, T. Podgorski, and C. Misbah, “Shape Diagram of Vesicles in Poiseuille Flow,” Phys. Rev. Lett.108(17), 178106 (2012).
[CrossRef] [PubMed]

A. Farutin and C. Misbah, “Squaring, Parity Breaking, and S Tumbling of Vesicles under Shear Flow,” Phys. Rev. Lett.109(24), 248106 (2012).
[CrossRef] [PubMed]

T. Biben, A. Farutin, and C. Misbah, “Three-dimensional vesicles under shear flow: Numerical study of dynamics and phase diagram,” Phys. Rev. E Stat. Nonlin. Soft Matter Phys.83(3), 031921 (2011).
[CrossRef] [PubMed]

T. Podgorski, N. Callens, C. Minetti, G. Coupier, F. Dubois, and C. Misbah, “Dynamics of vesicle suspension in shear flow between walls,” Microgravity Sci. Technol.23(2), 263–270 (2011).
[CrossRef]

B. Kaoui, G. Biros, and C. Misbah, “Why Do Red Blood Cells Have Asymmetric Shapes Even in a Symmetric Flow?” Phys. Rev. Lett.103(18), 188101 (2009).
[CrossRef] [PubMed]

V. Vitkova, M.-A. Mader, B. Polack, C. Misbah, and T. Podgorski, “Micro-macro link in rheology of erythrocyte and vesicle suspensions,” Biophys. J.95(6), L33–L35 (2008).
[CrossRef] [PubMed]

G. Coupier, B. Kaoui, T. Podgorski, and C. Misbah, “Noninertial lateral migration of vesicles in bounded Poiseuille flow,” Phys. Fluids20(11), 111702 (2008).
[CrossRef]

N. Callens, C. Minetti, G. Coupier, M.-A. Mader, F. Dubois, C. Misbah, and T. Podgorski, “Hydrodynamical lift of vesicles undear shear flow in microgravity,” Europhys. Lett.83(2), 24002 (2008).
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D. Mumford and J. Shah, “Optimal approximation by piece-wise smooth functions and associated variational problems,” Commun. Pure Appl. Math.42(5), 577–685 (1989).
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M. Yamada, M. Nakashima, and M. Seki, “Pinched flow fractionation: Continuous size separation of particles utilizing a laminar flow profile in a pinched microchannel,” Anal. Chem.76(18), 5465–5471 (2004).
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H. Noguchi, G. Gompper, L. Schmid, A. Wixforth, and T. Franke, “Dynamics of fluid vesicles in flow through structured microchannels,” Europhys. Lett.89(2), 28002 (2010).
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P.-Y. Gires, A. Srivastav, C. Misbah, T. Podgorski, and G. Coupier, “Pairwise hydrodynamic interactions and diffusion in a vesicle suspension,” Phys. Fluids26(1), 013304 (2014).
[CrossRef]

X. Grandchamp, G. Coupier, A. Srivastav, C. Minetti, and T. Podgorski, “Lift and down-gradient shear-induced diffusion in red blood cell suspensions,” Phys. Rev. Lett.110(10), 108101 (2013).
[CrossRef] [PubMed]

G. Coupier, A. Farutin, C. Minetti, T. Podgorski, and C. Misbah, “Shape Diagram of Vesicles in Poiseuille Flow,” Phys. Rev. Lett.108(17), 178106 (2012).
[CrossRef] [PubMed]

A. Srivastav, T. Podgorski, and G. Coupier, “Efficiency of size-dependent particle separation by pinched flow fractionation,” Microfluid. Nanofluid.13(5), 697–701 (2012).
[CrossRef]

T. Podgorski, N. Callens, C. Minetti, G. Coupier, F. Dubois, and C. Misbah, “Dynamics of vesicle suspension in shear flow between walls,” Microgravity Sci. Technol.23(2), 263–270 (2011).
[CrossRef]

N. Callens, C. Minetti, G. Coupier, M.-A. Mader, F. Dubois, C. Misbah, and T. Podgorski, “Hydrodynamical lift of vesicles undear shear flow in microgravity,” Europhys. Lett.83(2), 24002 (2008).
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[CrossRef]

V. Vitkova, M.-A. Mader, B. Polack, C. Misbah, and T. Podgorski, “Micro-macro link in rheology of erythrocyte and vesicle suspensions,” Biophys. J.95(6), L33–L35 (2008).
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V. Vitkova, M.-A. Mader, B. Polack, C. Misbah, and T. Podgorski, “Micro-macro link in rheology of erythrocyte and vesicle suspensions,” Biophys. J.95(6), L33–L35 (2008).
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A. S. Popel and P. C. Johnson, “Microcirculation and hemorheology,” Annu. Rev. Fluid Mech.37(1), 43–69 (2005).
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Requena, M. L.

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H. Noguchi, G. Gompper, L. Schmid, A. Wixforth, and T. Franke, “Dynamics of fluid vesicles in flow through structured microchannels,” Europhys. Lett.89(2), 28002 (2010).
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Schockaert, C.

Segre, E.

J. Deschamps, V. Kantsler, E. Segre, and V. Steinberg, “Dynamics of a vesicle in general flow,” Proc. Natl. Acad. Sci. U.S.A.106(28), 11444–11447 (2009).
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V. Kantsler, E. Segre, and V. Steinberg, “Dynamics of interacting vesicles and rheology of vesicle suspension in shear flow,” Europhys. Lett.82(5), 58005 (2008).
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D. Abreu and U. Seifert, “Noisy Nonlinear Dynamics of Vesicles in Flow,” Phys. Rev. Lett.110(23), 238103 (2013).
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M. Yamada, M. Nakashima, and M. Seki, “Pinched flow fractionation: Continuous size separation of particles utilizing a laminar flow profile in a pinched microchannel,” Anal. Chem.76(18), 5465–5471 (2004).
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D. Mumford and J. Shah, “Optimal approximation by piece-wise smooth functions and associated variational problems,” Commun. Pure Appl. Math.42(5), 577–685 (1989).
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M. I. Angelova, S. Soleau, P. Meleard, J.-F. Faucon, and P. Bothorel, “Preparation of giant vesicles by external A.C. electric fields. Kinetics and applications,” Prog. Colloid Polym. Sci.89, 127 (1992).

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H. Zhao, A. Spann, and E. S. G. Shaqfeh, “The dynamics of a vesicle in a wall-bound shear flow,” Phys. Fluids23(12), 121901 (2011).
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P.-Y. Gires, A. Srivastav, C. Misbah, T. Podgorski, and G. Coupier, “Pairwise hydrodynamic interactions and diffusion in a vesicle suspension,” Phys. Fluids26(1), 013304 (2014).
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X. Grandchamp, G. Coupier, A. Srivastav, C. Minetti, and T. Podgorski, “Lift and down-gradient shear-induced diffusion in red blood cell suspensions,” Phys. Rev. Lett.110(10), 108101 (2013).
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Anal. Chem. (1)

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Biomed. Opt. Express (1)

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[CrossRef]

Microgravity Sci. Technol. (1)

T. Podgorski, N. Callens, C. Minetti, G. Coupier, F. Dubois, and C. Misbah, “Dynamics of vesicle suspension in shear flow between walls,” Microgravity Sci. Technol.23(2), 263–270 (2011).
[CrossRef]

Opt. Express (7)

F. Dubois, C. Schockaert, N. Callens, and C. Yourassowsky, “Focus plane detection criteria in digital holography microscopy by amplitude analysis,” Opt. Express14(13), 5895–5908 (2006).
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A. El Mallahi and F. Dubois, “Dependency and precision of the refocusing criterion based on amplitude analysis in digital holographic microscopy,” Opt. Express19(7), 6684–6698 (2011).
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J. Gao, D. R. Guildenbecher, P. L. Reu, and J. Chen, “Uncertainty characterization of particle depth measurement using digital in-line holography and the hybrid method,” Opt. Express21(22), 26432–26449 (2013).
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Opt. Lett. (1)

Phys. Fluids (3)

G. Coupier, B. Kaoui, T. Podgorski, and C. Misbah, “Noninertial lateral migration of vesicles in bounded Poiseuille flow,” Phys. Fluids20(11), 111702 (2008).
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Phys. Rev. E Stat. Nonlin. Soft Matter Phys. (3)

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Phys. Rev. Lett. (10)

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Figures (14)

Fig. 1
Fig. 1

Optical setup description. L1, focusing lens; RGG, Rotating Ground Glass for spatial coherence reduction; L2, collimating lens; L3, L4, identical microscope lenses (x20); L5, refocusing lens; CCD, charge-coupled device camera; M1-M3, mirrors; BS1, BS2, beam splitters; S, sample.

Fig. 2
Fig. 2

Sketch of the experimental shear flow chamber.

Fig. 3
Fig. 3

Examples of intensity and phase images of a vesicle (diameter around 20 µm) at different planes (focus plane + 46 µm, at the middle and out of focus −70 µm and + 100 µm). Scalebar on the right indicates the grey levels.

Fig. 4
Fig. 4

Example of compensation. (a) original phase map; (b) fitted phase map; (c) compensated phase map. Scalebar on the right indicates the grey levels.

Fig. 5
Fig. 5

Example of xy detection. (a) Original phase map. (b) XY detection and pre-segmentation of the vesicles. Scalebar on the left indicates the grey levels.

Fig. 6
Fig. 6

Description of the different ROIs. Row (I): Intensity, Row (II): Phase, Row (III): Compensated phase, Row (IV): Mask. Col (a): Vesicle under consideration, Col (b): Cropped ROI (110 x 128 pixels) ; IV-b is the pre-segmented vesicle, Col(c): Enlarged ROI (256 x 256 pixels) with values minimizing the diffraction (cropped ROI in dashed line), Col (d): Contour line of the region where the metrics for the best focus plane is computed – cropped ROI in dashed line.

Fig. 7
Fig. 7

Example of 4 vesicles with close xy position and different z positions. First row: intensity image, second row: compensated phase image. First column: identification of the 4 vesicles (ROI 210 x 210 pixels), column 2 to 5 correspond to vesicle 1 to 4 (ROI cropped around the center of each vesicle). Scalebar on the right indicates the grey levels.

Fig. 8
Fig. 8

Example of two vesicles with equivalent diameter (around 20 µm) but different deflations. First column: vesicle 1 and 2. Second column: Segmented vesicles (segmentation contour in white). Third column: corresponding fitted ellipse (a1 is the big axis, a2 is the small axis).

Fig. 9
Fig. 9

Example of false detections. First column: vesicle 1 and 2. Second column: Segmented vesicles (segmentation contour in white). Third column: corresponding fitted ellipse. Aggregate of first line: Orientation = 38.57°, MSE = 1.34 µm, AR = 2.16. Aggregate of second line: Orientation = 3.21°, MSE = 1.12 µm, AR = 1.61.

Fig. 10
Fig. 10

Size distribution within a vesicle suspension under shear: volume fraction density as a function of apparent long axis a1 .

Fig. 11
Fig. 11

Aspect ratio a1/a2 distribution in the vesicle suspension of Fig. 10.

Fig. 12
Fig. 12

z positions of vesicles across the shear chamber of thickness h = 170 microns. Shear rate is 50 s−1 and volume concentration 1.9x10−3 Vesicles were sorted by pinched flow fractionation method, so that a1 = 16 ± 3 microns. Only vesicles with AR between 1.1 and 1.3 are represented. Quasi-spherical vesicles lift much less. More deflated vesicles are rare (see Fig. 11). The full line shows the one parameter fit by the z(t) evolution obtained by solving dz/dt = A (1/z2-1/(h-z)2).

Fig. 13
Fig. 13

Same as Fig. 12 but with volume concentration 7.2x10−3 .

Fig. 14
Fig. 14

Time evolution of the standard deviation w in the distribution of vesicles for the two clouds of Figs. 12 (triangles) and 13 (squares), in log-log scale. Full lines have slopes 1/3 while the dotted line has slope 1/2.

Tables (2)

Tables Icon

Table 1 XYZ position and equivalent diameter of the 4 vesicles of Fig. 7.

Tables Icon

Table 2 Parameters extracted from the segmentation process of Fig. 8. MSE is the Mean Square Error.

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