A. Ale, V. Ermolayev, E. Herzog, C. Cohrs, M. H. de Angelis, and V. Ntziachristos, “FMT-XCT: in vivo animal studies with hybrid fluorescence molecular tomography-X-ray computed tomography,” Nat. Methods 9(6), 615–620 (2012).

[Crossref]
[PubMed]

P. Wu, K. Liu, Q. Zhang, Z. Xue, Y. Li, N. Ning, X. Yang, X. Li, and J. Tian, “Detection of mouse liver cancer via a parallel iterative shrinkage method in hybrid optical/microcomputed tomography imaging,” J. Biomed. Opt. 17(12), 126012 (2012).

[Crossref]
[PubMed]

M. A. Whitney, J. L. Crisp, L. T. Nguyen, B. Friedman, L. A. Gross, P. Steinbach, R. Y. Tsien, and Q. T. Nguyen, “Fluorescent peptides highlight peripheral nerves during surgery in mice,” Nat. Biotechnol. 29(4), 352–356 (2011).

[Crossref]
[PubMed]

G. M. van Dam, G. Themelis, L. M. Crane, N. J. Harlaar, R. G. Pleijhuis, W. Kelder, A. Sarantopoulos, J. S. de Jong, H. J. Arts, A. G. van der Zee, J. Bart, P. S. Low, and V. Ntziachristos, “Intraoperative tumor-specific fluorescence imaging in ovarian cancer by folate receptor-α targeting: first in-human results,” Nat. Med. 17(10), 1315–1319 (2011).

[Crossref]
[PubMed]

H. Fan-Minogue, Z. Cao, R. Paulmurugan, C. T. Chan, T. F. Massoud, D. W. Felsher, and S. S. Gambhir, “Noninvasive molecular imaging of c-Myc activation in living mice,” Proc. Natl. Acad. Sci. U.S.A. 107(36), 15892–15897 (2010).

[Crossref]
[PubMed]

D. Han, X. Yang, K. Liu, C. Qin, B. Zhang, X. Ma, and J. Tian, “Efficient reconstruction method for L1 regularization in fluorescence molecular tomography,” Appl. Opt. 49(36), 6930–6937 (2010).

[Crossref]
[PubMed]

V. Ntziachristos, “Going deeper than microscopy: the optical imaging frontier in biology,” Nat. Methods 7(8), 603–614 (2010).

[Crossref]
[PubMed]

C. H. Qin, S. P. Zhu, and J. Tian, “New Optical Molecular Imaging Systems,” Curr. Pharm. Biotechnol. 11(6), 620–627 (2010).

[Crossref]
[PubMed]

D. Han, J. Tian, K. Liu, J. Feng, B. Zhang, X. Ma, and C. Qin, “Sparsity-promoting tomographic fluorescence imaging with simplified spherical harmonics approximation,” IEEE Trans. Biomed. Eng. 57(10), 2564–2567 (2010).

[Crossref]
[PubMed]

D. Han, J. Tian, S. P. Zhu, J. C. Feng, C. H. Qin, B. Zhang, and X. Yang, “A fast reconstruction algorithm for fluorescence molecular tomography with sparsity regularization,” Opt. Express 18(8), 8630–8646 (2010).

[Crossref]
[PubMed]

X. Chen, X. Gao, D. Chen, X. Ma, X. Zhao, M. Shen, X. Li, X. Qu, J. Liang, J. Ripoll, and J. Tian, “3D reconstruction of light flux distribution on arbitrary surfaces from 2D multi-photographic images,” Opt. Express 18(19), 19876–19893 (2010).

[Crossref]
[PubMed]

D. F. Wang, X. Liu, Y. P. Chen, and J. Bai, “A Novel Finite-Element-Based Algorithm for Fluorescence Molecular Tomography of Heterogeneous Media,” IEEE Trans. Inf. Technol. Biomed. 13(5), 766–773 (2009).

[Crossref]
[PubMed]

S. Zhu, J. Tian, G. Yan, C. Qin, and J. Feng, “Cone beam micro-CT system for small animal imaging and performance evaluation,” Int. J. Biomed. Imaging 2009, 960573 (2009).

[Crossref]
[PubMed]

N. Blow, “In vivo molecular imaging: the inside job,” Nat. Methods 6(6), 465–469 (2009).

[Crossref]

A. M. Bruckstein, D. L. Donoho, and M. Elad, “From sparse solutions of systems of equations to sparse modeling of signals and images,” SIAM Rev. 51(1), 34–81 (2009).

[Crossref]

W. Bangerth and A. Joshi, “Adaptive finite element methods for the solution of inverse problems in optical tomography,” Inverse Probl. 24(3), 034011 (2008).

[Crossref]

G. Yan, J. Tian, S. Zhu, Y. Dai, and C. Qin, “Fast cone-beam CT image reconstruction using GPU hardware,” J. XRay Sci. Technol. 16, 225–234 (2008).

Y. Y. Tan and H. B. Jiang, “DOT guided fluorescence molecular tomography of arbitrarily shaped objects,” Med. Phys. 35(12), 5703–5707 (2008).

[Crossref]
[PubMed]

M. Elad, B. Matalon, and M. Zibulevsky, “Coordinate and subspace optimization methods for linear least squares with non-quadratic regularization,” Appl. Comput. Harmon. Anal. 23(3), 346–367 (2007).

[Crossref]

J. H. Lee, A. Joshi, and E. M. Sevick-Muraca, “Fully adaptive finite element based tomography using tetrahedral dual-meshing for fluorescence enhanced optical imaging in tissue,” Opt. Express 15(11), 6955–6975 (2007).

[Crossref]
[PubMed]

N. Cao, A. Nehorai, and M. Jacobs, “Image reconstruction for diffuse optical tomography using sparsity regularization and expectation-maximization algorithm,” Opt. Express 15(21), 13695–13708 (2007).

[Crossref]
[PubMed]

Y. Lin, H. Gao, O. Nalcioglu, and G. Gulsen, “Fluorescence diffuse optical tomography with functional and anatomical a priori information: feasibility study,” Phys. Med. Biol. 52(18), 5569–5585 (2007).

[Crossref]
[PubMed]

X. L. Song, D. F. Wang, N. G. Chen, J. Bai, and H. Wang, “Reconstruction for free-space fluorescence tomography using a novel hybrid adaptive finite element algorithm,” Opt. Express 15(26), 18300–18317 (2007).

[Crossref]
[PubMed]

D. F. Wang, X. L. Song, and J. Bai, “Adaptive-mesh-based algorithm for fluorescence molecular tomography using an analytical solution,” Opt. Express 15(15), 9722–9730 (2007).

[Crossref]
[PubMed]

P. Mohajerani, A. A. Eftekhar, J. D. Huang, and A. Adibi, “Optimal sparse solution for fluorescent diffuse optical tomography: theory and phantom experimental results,” Appl. Opt. 46(10), 1679–1685 (2007).

[Crossref]
[PubMed]

V. Ntziachristos, “Fluorescence molecular imaging,” Annu. Rev. Biomed. Eng. 8(1), 1–33 (2006).

[Crossref]
[PubMed]

D. L. Donoho, “Compressed sensing,” IEEE Trans. Inf. Theory 52(4), 1289–1306 (2006).

[Crossref]

F. Gao, H. Zhao, Y. Tanikawa, and Y. Yamada, “A linear, featured-data scheme for image reconstruction in time-domain fluorescence molecular tomography,” Opt. Express 14(16), 7109–7124 (2006).

[Crossref]
[PubMed]

A. D. Klose and E. W. Larsen, “Light transport in biological tissue based on the simplified spherical harmonics equations,” J. Comput. Phys. 220(1), 441–470 (2006).

[Crossref]

W. X. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. V. Wang, E. A. Hoffman, G. McLennan, P. B. McCray, J. Zabner, and A. Cong, “Practical reconstruction method for bioluminescence tomography,” Opt. Express 13(18), 6756–6771 (2005).

[Crossref]
[PubMed]

G. Alexandrakis, F. R. Rannou, and A. F. Chatziioannou, “Tomographic bioluminescence imaging by use of a combined optical-PET (OPET) system: a computer simulation feasibility study,” Phys. Med. Biol. 50(17), 4225–4241 (2005).

[Crossref]
[PubMed]

A. X. Cong and G. Wang, “A finite-element-based reconstruction method for 3D fluorescence tomography,” Opt. Express 13(24), 9847–9857 (2005).

[Crossref]
[PubMed]

A. D. Klose, V. Ntziachristos, and A. H. Hielscher, “The inverse source problem based on the radiative transfer equation in optical molecular imaging,” J. Comput. Phys. 202(1), 323–345 (2005).

[Crossref]

A. B. Milstein, J. J. Stott, S. Oh, D. A. Boas, R. P. Millane, C. A. Bouman, and K. J. Webb, “Fluorescence optical diffusion tomography using multiple-frequency data,” J. Opt. Soc. Am. A 21(6), 1035–1049 (2004).

[Crossref]
[PubMed]

A. Joshi, W. Bangerth, and E. M. Sevick-Muraca, “Adaptive finite element based tomography for fluorescence optical imaging in tissue,” Opt. Express 12(22), 5402–5417 (2004).

[Crossref]
[PubMed]

M. Schweiger, S. R. Arridge, M. Hiraoka, and D. T. Delpy, “The Finite Element Method for the Propagation of Light in Scattering Media: Boundary and Source Conditions,” Med. Phys. 22(11), 1779–1792 (1995).

[Crossref]
[PubMed]

A. Ale, V. Ermolayev, E. Herzog, C. Cohrs, M. H. de Angelis, and V. Ntziachristos, “FMT-XCT: in vivo animal studies with hybrid fluorescence molecular tomography-X-ray computed tomography,” Nat. Methods 9(6), 615–620 (2012).

[Crossref]
[PubMed]

G. Alexandrakis, F. R. Rannou, and A. F. Chatziioannou, “Tomographic bioluminescence imaging by use of a combined optical-PET (OPET) system: a computer simulation feasibility study,” Phys. Med. Biol. 50(17), 4225–4241 (2005).

[Crossref]
[PubMed]

M. Schweiger, S. R. Arridge, M. Hiraoka, and D. T. Delpy, “The Finite Element Method for the Propagation of Light in Scattering Media: Boundary and Source Conditions,” Med. Phys. 22(11), 1779–1792 (1995).

[Crossref]
[PubMed]

G. M. van Dam, G. Themelis, L. M. Crane, N. J. Harlaar, R. G. Pleijhuis, W. Kelder, A. Sarantopoulos, J. S. de Jong, H. J. Arts, A. G. van der Zee, J. Bart, P. S. Low, and V. Ntziachristos, “Intraoperative tumor-specific fluorescence imaging in ovarian cancer by folate receptor-α targeting: first in-human results,” Nat. Med. 17(10), 1315–1319 (2011).

[Crossref]
[PubMed]

D. F. Wang, X. Liu, Y. P. Chen, and J. Bai, “A Novel Finite-Element-Based Algorithm for Fluorescence Molecular Tomography of Heterogeneous Media,” IEEE Trans. Inf. Technol. Biomed. 13(5), 766–773 (2009).

[Crossref]
[PubMed]

D. F. Wang, X. L. Song, and J. Bai, “Adaptive-mesh-based algorithm for fluorescence molecular tomography using an analytical solution,” Opt. Express 15(15), 9722–9730 (2007).

[Crossref]
[PubMed]

X. L. Song, D. F. Wang, N. G. Chen, J. Bai, and H. Wang, “Reconstruction for free-space fluorescence tomography using a novel hybrid adaptive finite element algorithm,” Opt. Express 15(26), 18300–18317 (2007).

[Crossref]
[PubMed]

G. M. van Dam, G. Themelis, L. M. Crane, N. J. Harlaar, R. G. Pleijhuis, W. Kelder, A. Sarantopoulos, J. S. de Jong, H. J. Arts, A. G. van der Zee, J. Bart, P. S. Low, and V. Ntziachristos, “Intraoperative tumor-specific fluorescence imaging in ovarian cancer by folate receptor-α targeting: first in-human results,” Nat. Med. 17(10), 1315–1319 (2011).

[Crossref]
[PubMed]

N. Blow, “In vivo molecular imaging: the inside job,” Nat. Methods 6(6), 465–469 (2009).

[Crossref]

A. M. Bruckstein, D. L. Donoho, and M. Elad, “From sparse solutions of systems of equations to sparse modeling of signals and images,” SIAM Rev. 51(1), 34–81 (2009).

[Crossref]

H. Fan-Minogue, Z. Cao, R. Paulmurugan, C. T. Chan, T. F. Massoud, D. W. Felsher, and S. S. Gambhir, “Noninvasive molecular imaging of c-Myc activation in living mice,” Proc. Natl. Acad. Sci. U.S.A. 107(36), 15892–15897 (2010).

[Crossref]
[PubMed]

H. Fan-Minogue, Z. Cao, R. Paulmurugan, C. T. Chan, T. F. Massoud, D. W. Felsher, and S. S. Gambhir, “Noninvasive molecular imaging of c-Myc activation in living mice,” Proc. Natl. Acad. Sci. U.S.A. 107(36), 15892–15897 (2010).

[Crossref]
[PubMed]

G. Alexandrakis, F. R. Rannou, and A. F. Chatziioannou, “Tomographic bioluminescence imaging by use of a combined optical-PET (OPET) system: a computer simulation feasibility study,” Phys. Med. Biol. 50(17), 4225–4241 (2005).

[Crossref]
[PubMed]

X. Chen, X. Gao, D. Chen, X. Ma, X. Zhao, M. Shen, X. Li, X. Qu, J. Liang, J. Ripoll, and J. Tian, “3D reconstruction of light flux distribution on arbitrary surfaces from 2D multi-photographic images,” Opt. Express 18(19), 19876–19893 (2010).

[Crossref]
[PubMed]

X. Chen, X. Gao, D. Chen, X. Ma, X. Zhao, M. Shen, X. Li, X. Qu, J. Liang, J. Ripoll, and J. Tian, “3D reconstruction of light flux distribution on arbitrary surfaces from 2D multi-photographic images,” Opt. Express 18(19), 19876–19893 (2010).

[Crossref]
[PubMed]

D. F. Wang, X. Liu, Y. P. Chen, and J. Bai, “A Novel Finite-Element-Based Algorithm for Fluorescence Molecular Tomography of Heterogeneous Media,” IEEE Trans. Inf. Technol. Biomed. 13(5), 766–773 (2009).

[Crossref]
[PubMed]

A. Ale, V. Ermolayev, E. Herzog, C. Cohrs, M. H. de Angelis, and V. Ntziachristos, “FMT-XCT: in vivo animal studies with hybrid fluorescence molecular tomography-X-ray computed tomography,” Nat. Methods 9(6), 615–620 (2012).

[Crossref]
[PubMed]

W. X. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. V. Wang, E. A. Hoffman, G. McLennan, P. B. McCray, J. Zabner, and A. Cong, “Practical reconstruction method for bioluminescence tomography,” Opt. Express 13(18), 6756–6771 (2005).

[Crossref]
[PubMed]

W. X. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. V. Wang, E. A. Hoffman, G. McLennan, P. B. McCray, J. Zabner, and A. Cong, “Practical reconstruction method for bioluminescence tomography,” Opt. Express 13(18), 6756–6771 (2005).

[Crossref]
[PubMed]

G. M. van Dam, G. Themelis, L. M. Crane, N. J. Harlaar, R. G. Pleijhuis, W. Kelder, A. Sarantopoulos, J. S. de Jong, H. J. Arts, A. G. van der Zee, J. Bart, P. S. Low, and V. Ntziachristos, “Intraoperative tumor-specific fluorescence imaging in ovarian cancer by folate receptor-α targeting: first in-human results,” Nat. Med. 17(10), 1315–1319 (2011).

[Crossref]
[PubMed]

M. A. Whitney, J. L. Crisp, L. T. Nguyen, B. Friedman, L. A. Gross, P. Steinbach, R. Y. Tsien, and Q. T. Nguyen, “Fluorescent peptides highlight peripheral nerves during surgery in mice,” Nat. Biotechnol. 29(4), 352–356 (2011).

[Crossref]
[PubMed]

G. Yan, J. Tian, S. Zhu, Y. Dai, and C. Qin, “Fast cone-beam CT image reconstruction using GPU hardware,” J. XRay Sci. Technol. 16, 225–234 (2008).

A. Ale, V. Ermolayev, E. Herzog, C. Cohrs, M. H. de Angelis, and V. Ntziachristos, “FMT-XCT: in vivo animal studies with hybrid fluorescence molecular tomography-X-ray computed tomography,” Nat. Methods 9(6), 615–620 (2012).

[Crossref]
[PubMed]

G. M. van Dam, G. Themelis, L. M. Crane, N. J. Harlaar, R. G. Pleijhuis, W. Kelder, A. Sarantopoulos, J. S. de Jong, H. J. Arts, A. G. van der Zee, J. Bart, P. S. Low, and V. Ntziachristos, “Intraoperative tumor-specific fluorescence imaging in ovarian cancer by folate receptor-α targeting: first in-human results,” Nat. Med. 17(10), 1315–1319 (2011).

[Crossref]
[PubMed]

M. Schweiger, S. R. Arridge, M. Hiraoka, and D. T. Delpy, “The Finite Element Method for the Propagation of Light in Scattering Media: Boundary and Source Conditions,” Med. Phys. 22(11), 1779–1792 (1995).

[Crossref]
[PubMed]

A. M. Bruckstein, D. L. Donoho, and M. Elad, “From sparse solutions of systems of equations to sparse modeling of signals and images,” SIAM Rev. 51(1), 34–81 (2009).

[Crossref]

D. L. Donoho, “Compressed sensing,” IEEE Trans. Inf. Theory 52(4), 1289–1306 (2006).

[Crossref]

A. M. Bruckstein, D. L. Donoho, and M. Elad, “From sparse solutions of systems of equations to sparse modeling of signals and images,” SIAM Rev. 51(1), 34–81 (2009).

[Crossref]

M. Elad, B. Matalon, and M. Zibulevsky, “Coordinate and subspace optimization methods for linear least squares with non-quadratic regularization,” Appl. Comput. Harmon. Anal. 23(3), 346–367 (2007).

[Crossref]

A. Ale, V. Ermolayev, E. Herzog, C. Cohrs, M. H. de Angelis, and V. Ntziachristos, “FMT-XCT: in vivo animal studies with hybrid fluorescence molecular tomography-X-ray computed tomography,” Nat. Methods 9(6), 615–620 (2012).

[Crossref]
[PubMed]

H. Fan-Minogue, Z. Cao, R. Paulmurugan, C. T. Chan, T. F. Massoud, D. W. Felsher, and S. S. Gambhir, “Noninvasive molecular imaging of c-Myc activation in living mice,” Proc. Natl. Acad. Sci. U.S.A. 107(36), 15892–15897 (2010).

[Crossref]
[PubMed]

H. Fan-Minogue, Z. Cao, R. Paulmurugan, C. T. Chan, T. F. Massoud, D. W. Felsher, and S. S. Gambhir, “Noninvasive molecular imaging of c-Myc activation in living mice,” Proc. Natl. Acad. Sci. U.S.A. 107(36), 15892–15897 (2010).

[Crossref]
[PubMed]

D. Han, J. Tian, K. Liu, J. Feng, B. Zhang, X. Ma, and C. Qin, “Sparsity-promoting tomographic fluorescence imaging with simplified spherical harmonics approximation,” IEEE Trans. Biomed. Eng. 57(10), 2564–2567 (2010).

[Crossref]
[PubMed]

S. Zhu, J. Tian, G. Yan, C. Qin, and J. Feng, “Cone beam micro-CT system for small animal imaging and performance evaluation,” Int. J. Biomed. Imaging 2009, 960573 (2009).

[Crossref]
[PubMed]

M. A. Whitney, J. L. Crisp, L. T. Nguyen, B. Friedman, L. A. Gross, P. Steinbach, R. Y. Tsien, and Q. T. Nguyen, “Fluorescent peptides highlight peripheral nerves during surgery in mice,” Nat. Biotechnol. 29(4), 352–356 (2011).

[Crossref]
[PubMed]

H. Fan-Minogue, Z. Cao, R. Paulmurugan, C. T. Chan, T. F. Massoud, D. W. Felsher, and S. S. Gambhir, “Noninvasive molecular imaging of c-Myc activation in living mice,” Proc. Natl. Acad. Sci. U.S.A. 107(36), 15892–15897 (2010).

[Crossref]
[PubMed]

Y. Lin, H. Gao, O. Nalcioglu, and G. Gulsen, “Fluorescence diffuse optical tomography with functional and anatomical a priori information: feasibility study,” Phys. Med. Biol. 52(18), 5569–5585 (2007).

[Crossref]
[PubMed]

X. Chen, X. Gao, D. Chen, X. Ma, X. Zhao, M. Shen, X. Li, X. Qu, J. Liang, J. Ripoll, and J. Tian, “3D reconstruction of light flux distribution on arbitrary surfaces from 2D multi-photographic images,” Opt. Express 18(19), 19876–19893 (2010).

[Crossref]
[PubMed]

M. A. Whitney, J. L. Crisp, L. T. Nguyen, B. Friedman, L. A. Gross, P. Steinbach, R. Y. Tsien, and Q. T. Nguyen, “Fluorescent peptides highlight peripheral nerves during surgery in mice,” Nat. Biotechnol. 29(4), 352–356 (2011).

[Crossref]
[PubMed]

Y. Lin, H. Gao, O. Nalcioglu, and G. Gulsen, “Fluorescence diffuse optical tomography with functional and anatomical a priori information: feasibility study,” Phys. Med. Biol. 52(18), 5569–5585 (2007).

[Crossref]
[PubMed]

D. Han, J. Tian, K. Liu, J. Feng, B. Zhang, X. Ma, and C. Qin, “Sparsity-promoting tomographic fluorescence imaging with simplified spherical harmonics approximation,” IEEE Trans. Biomed. Eng. 57(10), 2564–2567 (2010).

[Crossref]
[PubMed]

D. Han, J. Tian, S. P. Zhu, J. C. Feng, C. H. Qin, B. Zhang, and X. Yang, “A fast reconstruction algorithm for fluorescence molecular tomography with sparsity regularization,” Opt. Express 18(8), 8630–8646 (2010).

[Crossref]
[PubMed]

D. Han, X. Yang, K. Liu, C. Qin, B. Zhang, X. Ma, and J. Tian, “Efficient reconstruction method for L1 regularization in fluorescence molecular tomography,” Appl. Opt. 49(36), 6930–6937 (2010).

[Crossref]
[PubMed]

G. M. van Dam, G. Themelis, L. M. Crane, N. J. Harlaar, R. G. Pleijhuis, W. Kelder, A. Sarantopoulos, J. S. de Jong, H. J. Arts, A. G. van der Zee, J. Bart, P. S. Low, and V. Ntziachristos, “Intraoperative tumor-specific fluorescence imaging in ovarian cancer by folate receptor-α targeting: first in-human results,” Nat. Med. 17(10), 1315–1319 (2011).

[Crossref]
[PubMed]

A. Ale, V. Ermolayev, E. Herzog, C. Cohrs, M. H. de Angelis, and V. Ntziachristos, “FMT-XCT: in vivo animal studies with hybrid fluorescence molecular tomography-X-ray computed tomography,” Nat. Methods 9(6), 615–620 (2012).

[Crossref]
[PubMed]

A. D. Klose, V. Ntziachristos, and A. H. Hielscher, “The inverse source problem based on the radiative transfer equation in optical molecular imaging,” J. Comput. Phys. 202(1), 323–345 (2005).

[Crossref]

M. Schweiger, S. R. Arridge, M. Hiraoka, and D. T. Delpy, “The Finite Element Method for the Propagation of Light in Scattering Media: Boundary and Source Conditions,” Med. Phys. 22(11), 1779–1792 (1995).

[Crossref]
[PubMed]

W. X. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. V. Wang, E. A. Hoffman, G. McLennan, P. B. McCray, J. Zabner, and A. Cong, “Practical reconstruction method for bioluminescence tomography,” Opt. Express 13(18), 6756–6771 (2005).

[Crossref]
[PubMed]

Y. Y. Tan and H. B. Jiang, “DOT guided fluorescence molecular tomography of arbitrarily shaped objects,” Med. Phys. 35(12), 5703–5707 (2008).

[Crossref]
[PubMed]

W. X. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. V. Wang, E. A. Hoffman, G. McLennan, P. B. McCray, J. Zabner, and A. Cong, “Practical reconstruction method for bioluminescence tomography,” Opt. Express 13(18), 6756–6771 (2005).

[Crossref]
[PubMed]

W. Bangerth and A. Joshi, “Adaptive finite element methods for the solution of inverse problems in optical tomography,” Inverse Probl. 24(3), 034011 (2008).

[Crossref]

J. H. Lee, A. Joshi, and E. M. Sevick-Muraca, “Fully adaptive finite element based tomography using tetrahedral dual-meshing for fluorescence enhanced optical imaging in tissue,” Opt. Express 15(11), 6955–6975 (2007).

[Crossref]
[PubMed]

A. Joshi, W. Bangerth, and E. M. Sevick-Muraca, “Adaptive finite element based tomography for fluorescence optical imaging in tissue,” Opt. Express 12(22), 5402–5417 (2004).

[Crossref]
[PubMed]

G. M. van Dam, G. Themelis, L. M. Crane, N. J. Harlaar, R. G. Pleijhuis, W. Kelder, A. Sarantopoulos, J. S. de Jong, H. J. Arts, A. G. van der Zee, J. Bart, P. S. Low, and V. Ntziachristos, “Intraoperative tumor-specific fluorescence imaging in ovarian cancer by folate receptor-α targeting: first in-human results,” Nat. Med. 17(10), 1315–1319 (2011).

[Crossref]
[PubMed]

A. D. Klose and E. W. Larsen, “Light transport in biological tissue based on the simplified spherical harmonics equations,” J. Comput. Phys. 220(1), 441–470 (2006).

[Crossref]

A. D. Klose, V. Ntziachristos, and A. H. Hielscher, “The inverse source problem based on the radiative transfer equation in optical molecular imaging,” J. Comput. Phys. 202(1), 323–345 (2005).

[Crossref]

W. X. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. V. Wang, E. A. Hoffman, G. McLennan, P. B. McCray, J. Zabner, and A. Cong, “Practical reconstruction method for bioluminescence tomography,” Opt. Express 13(18), 6756–6771 (2005).

[Crossref]
[PubMed]

A. D. Klose and E. W. Larsen, “Light transport in biological tissue based on the simplified spherical harmonics equations,” J. Comput. Phys. 220(1), 441–470 (2006).

[Crossref]

P. Wu, K. Liu, Q. Zhang, Z. Xue, Y. Li, N. Ning, X. Yang, X. Li, and J. Tian, “Detection of mouse liver cancer via a parallel iterative shrinkage method in hybrid optical/microcomputed tomography imaging,” J. Biomed. Opt. 17(12), 126012 (2012).

[Crossref]
[PubMed]

X. Chen, X. Gao, D. Chen, X. Ma, X. Zhao, M. Shen, X. Li, X. Qu, J. Liang, J. Ripoll, and J. Tian, “3D reconstruction of light flux distribution on arbitrary surfaces from 2D multi-photographic images,” Opt. Express 18(19), 19876–19893 (2010).

[Crossref]
[PubMed]

P. Wu, K. Liu, Q. Zhang, Z. Xue, Y. Li, N. Ning, X. Yang, X. Li, and J. Tian, “Detection of mouse liver cancer via a parallel iterative shrinkage method in hybrid optical/microcomputed tomography imaging,” J. Biomed. Opt. 17(12), 126012 (2012).

[Crossref]
[PubMed]

X. Chen, X. Gao, D. Chen, X. Ma, X. Zhao, M. Shen, X. Li, X. Qu, J. Liang, J. Ripoll, and J. Tian, “3D reconstruction of light flux distribution on arbitrary surfaces from 2D multi-photographic images,” Opt. Express 18(19), 19876–19893 (2010).

[Crossref]
[PubMed]

Y. Lin, H. Gao, O. Nalcioglu, and G. Gulsen, “Fluorescence diffuse optical tomography with functional and anatomical a priori information: feasibility study,” Phys. Med. Biol. 52(18), 5569–5585 (2007).

[Crossref]
[PubMed]

P. Wu, K. Liu, Q. Zhang, Z. Xue, Y. Li, N. Ning, X. Yang, X. Li, and J. Tian, “Detection of mouse liver cancer via a parallel iterative shrinkage method in hybrid optical/microcomputed tomography imaging,” J. Biomed. Opt. 17(12), 126012 (2012).

[Crossref]
[PubMed]

D. Han, J. Tian, K. Liu, J. Feng, B. Zhang, X. Ma, and C. Qin, “Sparsity-promoting tomographic fluorescence imaging with simplified spherical harmonics approximation,” IEEE Trans. Biomed. Eng. 57(10), 2564–2567 (2010).

[Crossref]
[PubMed]

D. Han, X. Yang, K. Liu, C. Qin, B. Zhang, X. Ma, and J. Tian, “Efficient reconstruction method for L1 regularization in fluorescence molecular tomography,” Appl. Opt. 49(36), 6930–6937 (2010).

[Crossref]
[PubMed]

D. F. Wang, X. Liu, Y. P. Chen, and J. Bai, “A Novel Finite-Element-Based Algorithm for Fluorescence Molecular Tomography of Heterogeneous Media,” IEEE Trans. Inf. Technol. Biomed. 13(5), 766–773 (2009).

[Crossref]
[PubMed]

W. X. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. V. Wang, E. A. Hoffman, G. McLennan, P. B. McCray, J. Zabner, and A. Cong, “Practical reconstruction method for bioluminescence tomography,” Opt. Express 13(18), 6756–6771 (2005).

[Crossref]
[PubMed]

G. M. van Dam, G. Themelis, L. M. Crane, N. J. Harlaar, R. G. Pleijhuis, W. Kelder, A. Sarantopoulos, J. S. de Jong, H. J. Arts, A. G. van der Zee, J. Bart, P. S. Low, and V. Ntziachristos, “Intraoperative tumor-specific fluorescence imaging in ovarian cancer by folate receptor-α targeting: first in-human results,” Nat. Med. 17(10), 1315–1319 (2011).

[Crossref]
[PubMed]

D. Han, J. Tian, K. Liu, J. Feng, B. Zhang, X. Ma, and C. Qin, “Sparsity-promoting tomographic fluorescence imaging with simplified spherical harmonics approximation,” IEEE Trans. Biomed. Eng. 57(10), 2564–2567 (2010).

[Crossref]
[PubMed]

D. Han, X. Yang, K. Liu, C. Qin, B. Zhang, X. Ma, and J. Tian, “Efficient reconstruction method for L1 regularization in fluorescence molecular tomography,” Appl. Opt. 49(36), 6930–6937 (2010).

[Crossref]
[PubMed]

X. Chen, X. Gao, D. Chen, X. Ma, X. Zhao, M. Shen, X. Li, X. Qu, J. Liang, J. Ripoll, and J. Tian, “3D reconstruction of light flux distribution on arbitrary surfaces from 2D multi-photographic images,” Opt. Express 18(19), 19876–19893 (2010).

[Crossref]
[PubMed]

H. Fan-Minogue, Z. Cao, R. Paulmurugan, C. T. Chan, T. F. Massoud, D. W. Felsher, and S. S. Gambhir, “Noninvasive molecular imaging of c-Myc activation in living mice,” Proc. Natl. Acad. Sci. U.S.A. 107(36), 15892–15897 (2010).

[Crossref]
[PubMed]

M. Elad, B. Matalon, and M. Zibulevsky, “Coordinate and subspace optimization methods for linear least squares with non-quadratic regularization,” Appl. Comput. Harmon. Anal. 23(3), 346–367 (2007).

[Crossref]

W. X. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. V. Wang, E. A. Hoffman, G. McLennan, P. B. McCray, J. Zabner, and A. Cong, “Practical reconstruction method for bioluminescence tomography,” Opt. Express 13(18), 6756–6771 (2005).

[Crossref]
[PubMed]

W. X. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. V. Wang, E. A. Hoffman, G. McLennan, P. B. McCray, J. Zabner, and A. Cong, “Practical reconstruction method for bioluminescence tomography,” Opt. Express 13(18), 6756–6771 (2005).

[Crossref]
[PubMed]

Y. Lin, H. Gao, O. Nalcioglu, and G. Gulsen, “Fluorescence diffuse optical tomography with functional and anatomical a priori information: feasibility study,” Phys. Med. Biol. 52(18), 5569–5585 (2007).

[Crossref]
[PubMed]

M. A. Whitney, J. L. Crisp, L. T. Nguyen, B. Friedman, L. A. Gross, P. Steinbach, R. Y. Tsien, and Q. T. Nguyen, “Fluorescent peptides highlight peripheral nerves during surgery in mice,” Nat. Biotechnol. 29(4), 352–356 (2011).

[Crossref]
[PubMed]

M. A. Whitney, J. L. Crisp, L. T. Nguyen, B. Friedman, L. A. Gross, P. Steinbach, R. Y. Tsien, and Q. T. Nguyen, “Fluorescent peptides highlight peripheral nerves during surgery in mice,” Nat. Biotechnol. 29(4), 352–356 (2011).

[Crossref]
[PubMed]

P. Wu, K. Liu, Q. Zhang, Z. Xue, Y. Li, N. Ning, X. Yang, X. Li, and J. Tian, “Detection of mouse liver cancer via a parallel iterative shrinkage method in hybrid optical/microcomputed tomography imaging,” J. Biomed. Opt. 17(12), 126012 (2012).

[Crossref]
[PubMed]

A. Ale, V. Ermolayev, E. Herzog, C. Cohrs, M. H. de Angelis, and V. Ntziachristos, “FMT-XCT: in vivo animal studies with hybrid fluorescence molecular tomography-X-ray computed tomography,” Nat. Methods 9(6), 615–620 (2012).

[Crossref]
[PubMed]

G. M. van Dam, G. Themelis, L. M. Crane, N. J. Harlaar, R. G. Pleijhuis, W. Kelder, A. Sarantopoulos, J. S. de Jong, H. J. Arts, A. G. van der Zee, J. Bart, P. S. Low, and V. Ntziachristos, “Intraoperative tumor-specific fluorescence imaging in ovarian cancer by folate receptor-α targeting: first in-human results,” Nat. Med. 17(10), 1315–1319 (2011).

[Crossref]
[PubMed]

V. Ntziachristos, “Going deeper than microscopy: the optical imaging frontier in biology,” Nat. Methods 7(8), 603–614 (2010).

[Crossref]
[PubMed]

V. Ntziachristos, “Fluorescence molecular imaging,” Annu. Rev. Biomed. Eng. 8(1), 1–33 (2006).

[Crossref]
[PubMed]

A. D. Klose, V. Ntziachristos, and A. H. Hielscher, “The inverse source problem based on the radiative transfer equation in optical molecular imaging,” J. Comput. Phys. 202(1), 323–345 (2005).

[Crossref]

H. Fan-Minogue, Z. Cao, R. Paulmurugan, C. T. Chan, T. F. Massoud, D. W. Felsher, and S. S. Gambhir, “Noninvasive molecular imaging of c-Myc activation in living mice,” Proc. Natl. Acad. Sci. U.S.A. 107(36), 15892–15897 (2010).

[Crossref]
[PubMed]

G. M. van Dam, G. Themelis, L. M. Crane, N. J. Harlaar, R. G. Pleijhuis, W. Kelder, A. Sarantopoulos, J. S. de Jong, H. J. Arts, A. G. van der Zee, J. Bart, P. S. Low, and V. Ntziachristos, “Intraoperative tumor-specific fluorescence imaging in ovarian cancer by folate receptor-α targeting: first in-human results,” Nat. Med. 17(10), 1315–1319 (2011).

[Crossref]
[PubMed]

D. Han, J. Tian, K. Liu, J. Feng, B. Zhang, X. Ma, and C. Qin, “Sparsity-promoting tomographic fluorescence imaging with simplified spherical harmonics approximation,” IEEE Trans. Biomed. Eng. 57(10), 2564–2567 (2010).

[Crossref]
[PubMed]

D. Han, X. Yang, K. Liu, C. Qin, B. Zhang, X. Ma, and J. Tian, “Efficient reconstruction method for L1 regularization in fluorescence molecular tomography,” Appl. Opt. 49(36), 6930–6937 (2010).

[Crossref]
[PubMed]

S. Zhu, J. Tian, G. Yan, C. Qin, and J. Feng, “Cone beam micro-CT system for small animal imaging and performance evaluation,” Int. J. Biomed. Imaging 2009, 960573 (2009).

[Crossref]
[PubMed]

G. Yan, J. Tian, S. Zhu, Y. Dai, and C. Qin, “Fast cone-beam CT image reconstruction using GPU hardware,” J. XRay Sci. Technol. 16, 225–234 (2008).

C. H. Qin, S. P. Zhu, and J. Tian, “New Optical Molecular Imaging Systems,” Curr. Pharm. Biotechnol. 11(6), 620–627 (2010).

[Crossref]
[PubMed]

D. Han, J. Tian, S. P. Zhu, J. C. Feng, C. H. Qin, B. Zhang, and X. Yang, “A fast reconstruction algorithm for fluorescence molecular tomography with sparsity regularization,” Opt. Express 18(8), 8630–8646 (2010).

[Crossref]
[PubMed]

X. Chen, X. Gao, D. Chen, X. Ma, X. Zhao, M. Shen, X. Li, X. Qu, J. Liang, J. Ripoll, and J. Tian, “3D reconstruction of light flux distribution on arbitrary surfaces from 2D multi-photographic images,” Opt. Express 18(19), 19876–19893 (2010).

[Crossref]
[PubMed]

G. Alexandrakis, F. R. Rannou, and A. F. Chatziioannou, “Tomographic bioluminescence imaging by use of a combined optical-PET (OPET) system: a computer simulation feasibility study,” Phys. Med. Biol. 50(17), 4225–4241 (2005).

[Crossref]
[PubMed]

X. Chen, X. Gao, D. Chen, X. Ma, X. Zhao, M. Shen, X. Li, X. Qu, J. Liang, J. Ripoll, and J. Tian, “3D reconstruction of light flux distribution on arbitrary surfaces from 2D multi-photographic images,” Opt. Express 18(19), 19876–19893 (2010).

[Crossref]
[PubMed]

G. M. van Dam, G. Themelis, L. M. Crane, N. J. Harlaar, R. G. Pleijhuis, W. Kelder, A. Sarantopoulos, J. S. de Jong, H. J. Arts, A. G. van der Zee, J. Bart, P. S. Low, and V. Ntziachristos, “Intraoperative tumor-specific fluorescence imaging in ovarian cancer by folate receptor-α targeting: first in-human results,” Nat. Med. 17(10), 1315–1319 (2011).

[Crossref]
[PubMed]

M. Schweiger, S. R. Arridge, M. Hiraoka, and D. T. Delpy, “The Finite Element Method for the Propagation of Light in Scattering Media: Boundary and Source Conditions,” Med. Phys. 22(11), 1779–1792 (1995).

[Crossref]
[PubMed]

J. H. Lee, A. Joshi, and E. M. Sevick-Muraca, “Fully adaptive finite element based tomography using tetrahedral dual-meshing for fluorescence enhanced optical imaging in tissue,” Opt. Express 15(11), 6955–6975 (2007).

[Crossref]
[PubMed]

A. Joshi, W. Bangerth, and E. M. Sevick-Muraca, “Adaptive finite element based tomography for fluorescence optical imaging in tissue,” Opt. Express 12(22), 5402–5417 (2004).

[Crossref]
[PubMed]

X. Chen, X. Gao, D. Chen, X. Ma, X. Zhao, M. Shen, X. Li, X. Qu, J. Liang, J. Ripoll, and J. Tian, “3D reconstruction of light flux distribution on arbitrary surfaces from 2D multi-photographic images,” Opt. Express 18(19), 19876–19893 (2010).

[Crossref]
[PubMed]

X. L. Song, D. F. Wang, N. G. Chen, J. Bai, and H. Wang, “Reconstruction for free-space fluorescence tomography using a novel hybrid adaptive finite element algorithm,” Opt. Express 15(26), 18300–18317 (2007).

[Crossref]
[PubMed]

D. F. Wang, X. L. Song, and J. Bai, “Adaptive-mesh-based algorithm for fluorescence molecular tomography using an analytical solution,” Opt. Express 15(15), 9722–9730 (2007).

[Crossref]
[PubMed]

M. A. Whitney, J. L. Crisp, L. T. Nguyen, B. Friedman, L. A. Gross, P. Steinbach, R. Y. Tsien, and Q. T. Nguyen, “Fluorescent peptides highlight peripheral nerves during surgery in mice,” Nat. Biotechnol. 29(4), 352–356 (2011).

[Crossref]
[PubMed]

Y. Y. Tan and H. B. Jiang, “DOT guided fluorescence molecular tomography of arbitrarily shaped objects,” Med. Phys. 35(12), 5703–5707 (2008).

[Crossref]
[PubMed]

G. M. van Dam, G. Themelis, L. M. Crane, N. J. Harlaar, R. G. Pleijhuis, W. Kelder, A. Sarantopoulos, J. S. de Jong, H. J. Arts, A. G. van der Zee, J. Bart, P. S. Low, and V. Ntziachristos, “Intraoperative tumor-specific fluorescence imaging in ovarian cancer by folate receptor-α targeting: first in-human results,” Nat. Med. 17(10), 1315–1319 (2011).

[Crossref]
[PubMed]

P. Wu, K. Liu, Q. Zhang, Z. Xue, Y. Li, N. Ning, X. Yang, X. Li, and J. Tian, “Detection of mouse liver cancer via a parallel iterative shrinkage method in hybrid optical/microcomputed tomography imaging,” J. Biomed. Opt. 17(12), 126012 (2012).

[Crossref]
[PubMed]

C. H. Qin, S. P. Zhu, and J. Tian, “New Optical Molecular Imaging Systems,” Curr. Pharm. Biotechnol. 11(6), 620–627 (2010).

[Crossref]
[PubMed]

D. Han, J. Tian, K. Liu, J. Feng, B. Zhang, X. Ma, and C. Qin, “Sparsity-promoting tomographic fluorescence imaging with simplified spherical harmonics approximation,” IEEE Trans. Biomed. Eng. 57(10), 2564–2567 (2010).

[Crossref]
[PubMed]

X. Chen, X. Gao, D. Chen, X. Ma, X. Zhao, M. Shen, X. Li, X. Qu, J. Liang, J. Ripoll, and J. Tian, “3D reconstruction of light flux distribution on arbitrary surfaces from 2D multi-photographic images,” Opt. Express 18(19), 19876–19893 (2010).

[Crossref]
[PubMed]

D. Han, J. Tian, S. P. Zhu, J. C. Feng, C. H. Qin, B. Zhang, and X. Yang, “A fast reconstruction algorithm for fluorescence molecular tomography with sparsity regularization,” Opt. Express 18(8), 8630–8646 (2010).

[Crossref]
[PubMed]

D. Han, X. Yang, K. Liu, C. Qin, B. Zhang, X. Ma, and J. Tian, “Efficient reconstruction method for L1 regularization in fluorescence molecular tomography,” Appl. Opt. 49(36), 6930–6937 (2010).

[Crossref]
[PubMed]

S. Zhu, J. Tian, G. Yan, C. Qin, and J. Feng, “Cone beam micro-CT system for small animal imaging and performance evaluation,” Int. J. Biomed. Imaging 2009, 960573 (2009).

[Crossref]
[PubMed]

G. Yan, J. Tian, S. Zhu, Y. Dai, and C. Qin, “Fast cone-beam CT image reconstruction using GPU hardware,” J. XRay Sci. Technol. 16, 225–234 (2008).

M. A. Whitney, J. L. Crisp, L. T. Nguyen, B. Friedman, L. A. Gross, P. Steinbach, R. Y. Tsien, and Q. T. Nguyen, “Fluorescent peptides highlight peripheral nerves during surgery in mice,” Nat. Biotechnol. 29(4), 352–356 (2011).

[Crossref]
[PubMed]

G. M. van Dam, G. Themelis, L. M. Crane, N. J. Harlaar, R. G. Pleijhuis, W. Kelder, A. Sarantopoulos, J. S. de Jong, H. J. Arts, A. G. van der Zee, J. Bart, P. S. Low, and V. Ntziachristos, “Intraoperative tumor-specific fluorescence imaging in ovarian cancer by folate receptor-α targeting: first in-human results,” Nat. Med. 17(10), 1315–1319 (2011).

[Crossref]
[PubMed]

G. M. van Dam, G. Themelis, L. M. Crane, N. J. Harlaar, R. G. Pleijhuis, W. Kelder, A. Sarantopoulos, J. S. de Jong, H. J. Arts, A. G. van der Zee, J. Bart, P. S. Low, and V. Ntziachristos, “Intraoperative tumor-specific fluorescence imaging in ovarian cancer by folate receptor-α targeting: first in-human results,” Nat. Med. 17(10), 1315–1319 (2011).

[Crossref]
[PubMed]

D. F. Wang, X. Liu, Y. P. Chen, and J. Bai, “A Novel Finite-Element-Based Algorithm for Fluorescence Molecular Tomography of Heterogeneous Media,” IEEE Trans. Inf. Technol. Biomed. 13(5), 766–773 (2009).

[Crossref]
[PubMed]

X. L. Song, D. F. Wang, N. G. Chen, J. Bai, and H. Wang, “Reconstruction for free-space fluorescence tomography using a novel hybrid adaptive finite element algorithm,” Opt. Express 15(26), 18300–18317 (2007).

[Crossref]
[PubMed]

D. F. Wang, X. L. Song, and J. Bai, “Adaptive-mesh-based algorithm for fluorescence molecular tomography using an analytical solution,” Opt. Express 15(15), 9722–9730 (2007).

[Crossref]
[PubMed]

A. X. Cong and G. Wang, “A finite-element-based reconstruction method for 3D fluorescence tomography,” Opt. Express 13(24), 9847–9857 (2005).

[Crossref]
[PubMed]

W. X. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. V. Wang, E. A. Hoffman, G. McLennan, P. B. McCray, J. Zabner, and A. Cong, “Practical reconstruction method for bioluminescence tomography,” Opt. Express 13(18), 6756–6771 (2005).

[Crossref]
[PubMed]

W. X. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. V. Wang, E. A. Hoffman, G. McLennan, P. B. McCray, J. Zabner, and A. Cong, “Practical reconstruction method for bioluminescence tomography,” Opt. Express 13(18), 6756–6771 (2005).

[Crossref]
[PubMed]

M. A. Whitney, J. L. Crisp, L. T. Nguyen, B. Friedman, L. A. Gross, P. Steinbach, R. Y. Tsien, and Q. T. Nguyen, “Fluorescent peptides highlight peripheral nerves during surgery in mice,” Nat. Biotechnol. 29(4), 352–356 (2011).

[Crossref]
[PubMed]

P. Wu, K. Liu, Q. Zhang, Z. Xue, Y. Li, N. Ning, X. Yang, X. Li, and J. Tian, “Detection of mouse liver cancer via a parallel iterative shrinkage method in hybrid optical/microcomputed tomography imaging,” J. Biomed. Opt. 17(12), 126012 (2012).

[Crossref]
[PubMed]

P. Wu, K. Liu, Q. Zhang, Z. Xue, Y. Li, N. Ning, X. Yang, X. Li, and J. Tian, “Detection of mouse liver cancer via a parallel iterative shrinkage method in hybrid optical/microcomputed tomography imaging,” J. Biomed. Opt. 17(12), 126012 (2012).

[Crossref]
[PubMed]

S. Zhu, J. Tian, G. Yan, C. Qin, and J. Feng, “Cone beam micro-CT system for small animal imaging and performance evaluation,” Int. J. Biomed. Imaging 2009, 960573 (2009).

[Crossref]
[PubMed]

G. Yan, J. Tian, S. Zhu, Y. Dai, and C. Qin, “Fast cone-beam CT image reconstruction using GPU hardware,” J. XRay Sci. Technol. 16, 225–234 (2008).

P. Wu, K. Liu, Q. Zhang, Z. Xue, Y. Li, N. Ning, X. Yang, X. Li, and J. Tian, “Detection of mouse liver cancer via a parallel iterative shrinkage method in hybrid optical/microcomputed tomography imaging,” J. Biomed. Opt. 17(12), 126012 (2012).

[Crossref]
[PubMed]

D. Han, X. Yang, K. Liu, C. Qin, B. Zhang, X. Ma, and J. Tian, “Efficient reconstruction method for L1 regularization in fluorescence molecular tomography,” Appl. Opt. 49(36), 6930–6937 (2010).

[Crossref]
[PubMed]

D. Han, J. Tian, S. P. Zhu, J. C. Feng, C. H. Qin, B. Zhang, and X. Yang, “A fast reconstruction algorithm for fluorescence molecular tomography with sparsity regularization,” Opt. Express 18(8), 8630–8646 (2010).

[Crossref]
[PubMed]

W. X. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. V. Wang, E. A. Hoffman, G. McLennan, P. B. McCray, J. Zabner, and A. Cong, “Practical reconstruction method for bioluminescence tomography,” Opt. Express 13(18), 6756–6771 (2005).

[Crossref]
[PubMed]

D. Han, J. Tian, K. Liu, J. Feng, B. Zhang, X. Ma, and C. Qin, “Sparsity-promoting tomographic fluorescence imaging with simplified spherical harmonics approximation,” IEEE Trans. Biomed. Eng. 57(10), 2564–2567 (2010).

[Crossref]
[PubMed]

D. Han, J. Tian, S. P. Zhu, J. C. Feng, C. H. Qin, B. Zhang, and X. Yang, “A fast reconstruction algorithm for fluorescence molecular tomography with sparsity regularization,” Opt. Express 18(8), 8630–8646 (2010).

[Crossref]
[PubMed]

D. Han, X. Yang, K. Liu, C. Qin, B. Zhang, X. Ma, and J. Tian, “Efficient reconstruction method for L1 regularization in fluorescence molecular tomography,” Appl. Opt. 49(36), 6930–6937 (2010).

[Crossref]
[PubMed]

P. Wu, K. Liu, Q. Zhang, Z. Xue, Y. Li, N. Ning, X. Yang, X. Li, and J. Tian, “Detection of mouse liver cancer via a parallel iterative shrinkage method in hybrid optical/microcomputed tomography imaging,” J. Biomed. Opt. 17(12), 126012 (2012).

[Crossref]
[PubMed]

X. Chen, X. Gao, D. Chen, X. Ma, X. Zhao, M. Shen, X. Li, X. Qu, J. Liang, J. Ripoll, and J. Tian, “3D reconstruction of light flux distribution on arbitrary surfaces from 2D multi-photographic images,” Opt. Express 18(19), 19876–19893 (2010).

[Crossref]
[PubMed]

S. Zhu, J. Tian, G. Yan, C. Qin, and J. Feng, “Cone beam micro-CT system for small animal imaging and performance evaluation,” Int. J. Biomed. Imaging 2009, 960573 (2009).

[Crossref]
[PubMed]

G. Yan, J. Tian, S. Zhu, Y. Dai, and C. Qin, “Fast cone-beam CT image reconstruction using GPU hardware,” J. XRay Sci. Technol. 16, 225–234 (2008).

C. H. Qin, S. P. Zhu, and J. Tian, “New Optical Molecular Imaging Systems,” Curr. Pharm. Biotechnol. 11(6), 620–627 (2010).

[Crossref]
[PubMed]

D. Han, J. Tian, S. P. Zhu, J. C. Feng, C. H. Qin, B. Zhang, and X. Yang, “A fast reconstruction algorithm for fluorescence molecular tomography with sparsity regularization,” Opt. Express 18(8), 8630–8646 (2010).

[Crossref]
[PubMed]

M. Elad, B. Matalon, and M. Zibulevsky, “Coordinate and subspace optimization methods for linear least squares with non-quadratic regularization,” Appl. Comput. Harmon. Anal. 23(3), 346–367 (2007).

[Crossref]

V. Ntziachristos, “Fluorescence molecular imaging,” Annu. Rev. Biomed. Eng. 8(1), 1–33 (2006).

[Crossref]
[PubMed]

M. Elad, B. Matalon, and M. Zibulevsky, “Coordinate and subspace optimization methods for linear least squares with non-quadratic regularization,” Appl. Comput. Harmon. Anal. 23(3), 346–367 (2007).

[Crossref]

D. Han, X. Yang, K. Liu, C. Qin, B. Zhang, X. Ma, and J. Tian, “Efficient reconstruction method for L1 regularization in fluorescence molecular tomography,” Appl. Opt. 49(36), 6930–6937 (2010).

[Crossref]
[PubMed]

P. Mohajerani, A. A. Eftekhar, J. D. Huang, and A. Adibi, “Optimal sparse solution for fluorescent diffuse optical tomography: theory and phantom experimental results,” Appl. Opt. 46(10), 1679–1685 (2007).

[Crossref]
[PubMed]

C. H. Qin, S. P. Zhu, and J. Tian, “New Optical Molecular Imaging Systems,” Curr. Pharm. Biotechnol. 11(6), 620–627 (2010).

[Crossref]
[PubMed]

D. Han, J. Tian, K. Liu, J. Feng, B. Zhang, X. Ma, and C. Qin, “Sparsity-promoting tomographic fluorescence imaging with simplified spherical harmonics approximation,” IEEE Trans. Biomed. Eng. 57(10), 2564–2567 (2010).

[Crossref]
[PubMed]

D. F. Wang, X. Liu, Y. P. Chen, and J. Bai, “A Novel Finite-Element-Based Algorithm for Fluorescence Molecular Tomography of Heterogeneous Media,” IEEE Trans. Inf. Technol. Biomed. 13(5), 766–773 (2009).

[Crossref]
[PubMed]

D. L. Donoho, “Compressed sensing,” IEEE Trans. Inf. Theory 52(4), 1289–1306 (2006).

[Crossref]

S. Zhu, J. Tian, G. Yan, C. Qin, and J. Feng, “Cone beam micro-CT system for small animal imaging and performance evaluation,” Int. J. Biomed. Imaging 2009, 960573 (2009).

[Crossref]
[PubMed]

W. Bangerth and A. Joshi, “Adaptive finite element methods for the solution of inverse problems in optical tomography,” Inverse Probl. 24(3), 034011 (2008).

[Crossref]

P. Wu, K. Liu, Q. Zhang, Z. Xue, Y. Li, N. Ning, X. Yang, X. Li, and J. Tian, “Detection of mouse liver cancer via a parallel iterative shrinkage method in hybrid optical/microcomputed tomography imaging,” J. Biomed. Opt. 17(12), 126012 (2012).

[Crossref]
[PubMed]

A. D. Klose, V. Ntziachristos, and A. H. Hielscher, “The inverse source problem based on the radiative transfer equation in optical molecular imaging,” J. Comput. Phys. 202(1), 323–345 (2005).

[Crossref]

A. D. Klose and E. W. Larsen, “Light transport in biological tissue based on the simplified spherical harmonics equations,” J. Comput. Phys. 220(1), 441–470 (2006).

[Crossref]

G. Yan, J. Tian, S. Zhu, Y. Dai, and C. Qin, “Fast cone-beam CT image reconstruction using GPU hardware,” J. XRay Sci. Technol. 16, 225–234 (2008).

M. Schweiger, S. R. Arridge, M. Hiraoka, and D. T. Delpy, “The Finite Element Method for the Propagation of Light in Scattering Media: Boundary and Source Conditions,” Med. Phys. 22(11), 1779–1792 (1995).

[Crossref]
[PubMed]

Y. Y. Tan and H. B. Jiang, “DOT guided fluorescence molecular tomography of arbitrarily shaped objects,” Med. Phys. 35(12), 5703–5707 (2008).

[Crossref]
[PubMed]

M. A. Whitney, J. L. Crisp, L. T. Nguyen, B. Friedman, L. A. Gross, P. Steinbach, R. Y. Tsien, and Q. T. Nguyen, “Fluorescent peptides highlight peripheral nerves during surgery in mice,” Nat. Biotechnol. 29(4), 352–356 (2011).

[Crossref]
[PubMed]

G. M. van Dam, G. Themelis, L. M. Crane, N. J. Harlaar, R. G. Pleijhuis, W. Kelder, A. Sarantopoulos, J. S. de Jong, H. J. Arts, A. G. van der Zee, J. Bart, P. S. Low, and V. Ntziachristos, “Intraoperative tumor-specific fluorescence imaging in ovarian cancer by folate receptor-α targeting: first in-human results,” Nat. Med. 17(10), 1315–1319 (2011).

[Crossref]
[PubMed]

A. Ale, V. Ermolayev, E. Herzog, C. Cohrs, M. H. de Angelis, and V. Ntziachristos, “FMT-XCT: in vivo animal studies with hybrid fluorescence molecular tomography-X-ray computed tomography,” Nat. Methods 9(6), 615–620 (2012).

[Crossref]
[PubMed]

V. Ntziachristos, “Going deeper than microscopy: the optical imaging frontier in biology,” Nat. Methods 7(8), 603–614 (2010).

[Crossref]
[PubMed]

N. Blow, “In vivo molecular imaging: the inside job,” Nat. Methods 6(6), 465–469 (2009).

[Crossref]

D. Han, J. Tian, S. P. Zhu, J. C. Feng, C. H. Qin, B. Zhang, and X. Yang, “A fast reconstruction algorithm for fluorescence molecular tomography with sparsity regularization,” Opt. Express 18(8), 8630–8646 (2010).

[Crossref]
[PubMed]

X. L. Song, D. F. Wang, N. G. Chen, J. Bai, and H. Wang, “Reconstruction for free-space fluorescence tomography using a novel hybrid adaptive finite element algorithm,” Opt. Express 15(26), 18300–18317 (2007).

[Crossref]
[PubMed]

D. F. Wang, X. L. Song, and J. Bai, “Adaptive-mesh-based algorithm for fluorescence molecular tomography using an analytical solution,” Opt. Express 15(15), 9722–9730 (2007).

[Crossref]
[PubMed]

N. Cao, A. Nehorai, and M. Jacobs, “Image reconstruction for diffuse optical tomography using sparsity regularization and expectation-maximization algorithm,” Opt. Express 15(21), 13695–13708 (2007).

[Crossref]
[PubMed]

A. Joshi, W. Bangerth, and E. M. Sevick-Muraca, “Adaptive finite element based tomography for fluorescence optical imaging in tissue,” Opt. Express 12(22), 5402–5417 (2004).

[Crossref]
[PubMed]

J. H. Lee, A. Joshi, and E. M. Sevick-Muraca, “Fully adaptive finite element based tomography using tetrahedral dual-meshing for fluorescence enhanced optical imaging in tissue,” Opt. Express 15(11), 6955–6975 (2007).

[Crossref]
[PubMed]

W. X. Cong, G. Wang, D. Kumar, Y. Liu, M. Jiang, L. V. Wang, E. A. Hoffman, G. McLennan, P. B. McCray, J. Zabner, and A. Cong, “Practical reconstruction method for bioluminescence tomography,” Opt. Express 13(18), 6756–6771 (2005).

[Crossref]
[PubMed]

A. X. Cong and G. Wang, “A finite-element-based reconstruction method for 3D fluorescence tomography,” Opt. Express 13(24), 9847–9857 (2005).

[Crossref]
[PubMed]

X. Chen, X. Gao, D. Chen, X. Ma, X. Zhao, M. Shen, X. Li, X. Qu, J. Liang, J. Ripoll, and J. Tian, “3D reconstruction of light flux distribution on arbitrary surfaces from 2D multi-photographic images,” Opt. Express 18(19), 19876–19893 (2010).

[Crossref]
[PubMed]

F. Gao, H. Zhao, Y. Tanikawa, and Y. Yamada, “A linear, featured-data scheme for image reconstruction in time-domain fluorescence molecular tomography,” Opt. Express 14(16), 7109–7124 (2006).

[Crossref]
[PubMed]

G. Alexandrakis, F. R. Rannou, and A. F. Chatziioannou, “Tomographic bioluminescence imaging by use of a combined optical-PET (OPET) system: a computer simulation feasibility study,” Phys. Med. Biol. 50(17), 4225–4241 (2005).

[Crossref]
[PubMed]

Y. Lin, H. Gao, O. Nalcioglu, and G. Gulsen, “Fluorescence diffuse optical tomography with functional and anatomical a priori information: feasibility study,” Phys. Med. Biol. 52(18), 5569–5585 (2007).

[Crossref]
[PubMed]

H. Fan-Minogue, Z. Cao, R. Paulmurugan, C. T. Chan, T. F. Massoud, D. W. Felsher, and S. S. Gambhir, “Noninvasive molecular imaging of c-Myc activation in living mice,” Proc. Natl. Acad. Sci. U.S.A. 107(36), 15892–15897 (2010).

[Crossref]
[PubMed]

A. M. Bruckstein, D. L. Donoho, and M. Elad, “From sparse solutions of systems of equations to sparse modeling of signals and images,” SIAM Rev. 51(1), 34–81 (2009).

[Crossref]