Abstract

The editors introduce the Biomedical Optics Express feature issue, “Optical Imaging and Spectroscopy,” which was a technical area at the 2010 Optical Society of America (OSA), Biomedical Optics (BIOMED) Topical Meeting held on 11–14 April in Miami, Florida. The feature issue includes 23 contributions from conference attendees.

© 2010 OSA

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  1. S. Srinivasan, H. R. Ghadyani, B. W. Pogue, and K. D. Paulsen, “A coupled finite element-boundary element method for modeling Diffusion equation in 3D multi-modality optical imaging,” Biomed. Opt. Express 1(2), 398–413 (2010).
    [CrossRef]
  2. Q. Fang, R. H. Moore, D. B. Kopans, and D. A. Boas, “Compositional-prior-guided image reconstruction algorithm for multi-modality imaging,” Biomed. Opt. Express 1(1), 223–235 (2010).
    [CrossRef]
  3. T. Tarvainen, V. Kolehmainen, J. P. Kaipio, and S. R. Arridge, “Corrections to linear methods for diffuse optical tomography using approximation error modeling,” Biomed. Opt. Express 1(1), 209–222 (2010).
    [CrossRef]
  4. F. Tian, H. Niu, S. Khadka, Z.-J. Lin, and H. Liu, “Algorithmic depth compensation improves quantification and noise suppression in functional diffuse optical tomography,” Biomed. Opt. Express 1(2), 441–452 (2010).
    [CrossRef]
  5. L. D. Montejo, A. D. Klose, and A. H. Hielscher, “Implementation of the equation of radiative transfer on block-structured grids for modeling light propagation in tissue,” Biomed. Opt. Express 1(3), 861–878 (2010).
    [CrossRef]
  6. H. K. Kim, M. Flexman, D. J. Yamashiro, J. J. Kandel, and A. H. Hielscher, “PDE-constrained multispectral imaging of tissue chromophores with the equation of radiative transfer,” Biomed. Opt. Express 1(3), 812–824 (2010).
    [CrossRef]
  7. C. D’Andrea, N. Ducros, A. Bassi, S. Arridge, and G. Valentini, “Fast 3D optical reconstruction in turbid media using spatially modulated light,” Biomed. Opt. Express 1(2), 471–481 (2010).
    [CrossRef]
  8. S. L. Jacques, R. Samatham, and N. Choudhury, “Rapid spectral analysis for spectral imaging,” Biomed. Opt. Express 1(1), 157–164 (2010).
    [CrossRef]
  9. S. J. Erickson, S. L. Martinez, J. Gonzalez, L. Caldera, and A. Godavarty, “Improved detection limits using a hand-held optical imager with coregistration capabilities,” Biomed. Opt. Express 1(1), 126–134 (2010).
    [CrossRef]
  10. W. R. Lloyd, R. H. Wilson, C.-W. Chang, G. D. Gillispie, and M.-A. Mycek, “Instrumentation to rapidly acquire fluorescence wavelength-time matrices of biological tissues,” Biomed. Opt. Express 1(2), 574–586 (2010).
    [CrossRef]
  11. R. Sun, M. B. Bouchard, and E. M. C. Hillman, “SPLASSH: Open source software for camera-based high-speed, multispectral in-vivo optical image acquisition,” Biomed. Opt. Express 1(2), 385–397 (2010).
    [CrossRef]
  12. L. Qiu, T. A. Larson, E. Vitkin, L. Guo, E. B. Hanlon, I. Itzkan, K. V. Sokolov, and L. T. Perelman, “Gold nanorod light scattering labels for biomedical imaging,” Biomed. Opt. Express 1(1), 135–142 (2010).
    [CrossRef]
  13. F. Tellier, R. Ravelo, H. Simon, R. Chabrier, J. Steibel, and P. Poulet, “Sentinel lymph node detection by an optical method using scattered photons,” Biomed. Opt. Express 1(3), 902–910 (2010).
    [CrossRef]
  14. F. E. Robles, S. Chowdhury, and A. Wax, “Assessing hemoglobin concentration using spectroscopic optical coherence tomography for feasibility of tissue diagnostics,” Biomed. Opt. Express 1(1), 310–317 (2010).
    [CrossRef]
  15. R. J. Cooper, R. Eames, J. Brunker, L. C. Enfield, A. P. Gibson, and J. C. Hebden, “A tissue equivalent phantom for simultaneous near-infrared optical tomography and EEG,” Biomed. Opt. Express 1(2), 425–430 (2010).
    [CrossRef]
  16. T. C. Wood and D. S. Elson, “Polarization response measurement and simulation of rigid endoscopes,” Biomed. Opt. Express 1(2), 463–470 (2010).
    [CrossRef]
  17. V. Venugopal, J. Chen, and X. Intes, “Development of an optical imaging platform for functional imaging of small animals using wide-field excitation,” Biomed. Opt. Express 1(1), 143–156 (2010).
    [CrossRef]
  18. S. A. Carp, G. P. Dai, D. A. Boas, M. A. Franceschini, and Y. R. Kim, “Validation of diffuse correlation spectroscopy measurements of rodent cerebral blood flow with simultaneous arterial spin labeling MRI; towards MRI-optical continuous cerebral metabolic monitoring,” Biomed. Opt. Express 1(2), 553–565 (2010).
    [CrossRef]
  19. D. K. Chen, M. K. Erb, Y. Tong, Y. Yu, A. Sassaroli, P. R. Bergethon, and S. Fantini, “Spectral and spatial dependence of diffuse optical signals in response to peripheral nerve stimulation,” Biomed. Opt. Express 1(3), 923–942 (2010).
    [CrossRef]
  20. M. K. Erb, D. K. Chen, A. Sassaroli, S. Fantini, and P. R. Bergethon, “Diffuse optical signals in response to peripheral nerve stimulation reflect skeletal muscle kinematics,” Biomed. Opt. Express 1(3), 943–954 (2010).
    [CrossRef]
  21. Yu. Shang, T. B. Symons, T. Durduran, A. G. Yodh, and G. Yu, “Effects of muscle fiber motion on diffuse correlation spectroscopy blood flow measurements during exercise,” Biomed. Opt. Express 1(2), 500–511 (2010).
    [CrossRef]
  22. M. Antkowiak, M. L. Torres-Mapa, K. Dholakia, and F. J. Gunn-Moore, “Quantitative phase study of the dynamic cellular response in femtosecond laser photoporation,” Biomed. Opt. Express 1(2), 414–424 (2010).
    [CrossRef]
  23. R. M. Pasternack, B. Rabin, J.-Y. Zheng, and N. N. Boustany, “Quantifying subcellular dynamics in apoptotic cells with two-dimensional Gabor filters,” Biomed. Opt. Express 1(2), 720–728 (2010) (Invited).
    [CrossRef]

2010

S. Srinivasan, H. R. Ghadyani, B. W. Pogue, and K. D. Paulsen, “A coupled finite element-boundary element method for modeling Diffusion equation in 3D multi-modality optical imaging,” Biomed. Opt. Express 1(2), 398–413 (2010).
[CrossRef]

Q. Fang, R. H. Moore, D. B. Kopans, and D. A. Boas, “Compositional-prior-guided image reconstruction algorithm for multi-modality imaging,” Biomed. Opt. Express 1(1), 223–235 (2010).
[CrossRef]

T. Tarvainen, V. Kolehmainen, J. P. Kaipio, and S. R. Arridge, “Corrections to linear methods for diffuse optical tomography using approximation error modeling,” Biomed. Opt. Express 1(1), 209–222 (2010).
[CrossRef]

F. Tian, H. Niu, S. Khadka, Z.-J. Lin, and H. Liu, “Algorithmic depth compensation improves quantification and noise suppression in functional diffuse optical tomography,” Biomed. Opt. Express 1(2), 441–452 (2010).
[CrossRef]

L. D. Montejo, A. D. Klose, and A. H. Hielscher, “Implementation of the equation of radiative transfer on block-structured grids for modeling light propagation in tissue,” Biomed. Opt. Express 1(3), 861–878 (2010).
[CrossRef]

H. K. Kim, M. Flexman, D. J. Yamashiro, J. J. Kandel, and A. H. Hielscher, “PDE-constrained multispectral imaging of tissue chromophores with the equation of radiative transfer,” Biomed. Opt. Express 1(3), 812–824 (2010).
[CrossRef]

C. D’Andrea, N. Ducros, A. Bassi, S. Arridge, and G. Valentini, “Fast 3D optical reconstruction in turbid media using spatially modulated light,” Biomed. Opt. Express 1(2), 471–481 (2010).
[CrossRef]

S. L. Jacques, R. Samatham, and N. Choudhury, “Rapid spectral analysis for spectral imaging,” Biomed. Opt. Express 1(1), 157–164 (2010).
[CrossRef]

S. J. Erickson, S. L. Martinez, J. Gonzalez, L. Caldera, and A. Godavarty, “Improved detection limits using a hand-held optical imager with coregistration capabilities,” Biomed. Opt. Express 1(1), 126–134 (2010).
[CrossRef]

W. R. Lloyd, R. H. Wilson, C.-W. Chang, G. D. Gillispie, and M.-A. Mycek, “Instrumentation to rapidly acquire fluorescence wavelength-time matrices of biological tissues,” Biomed. Opt. Express 1(2), 574–586 (2010).
[CrossRef]

R. Sun, M. B. Bouchard, and E. M. C. Hillman, “SPLASSH: Open source software for camera-based high-speed, multispectral in-vivo optical image acquisition,” Biomed. Opt. Express 1(2), 385–397 (2010).
[CrossRef]

L. Qiu, T. A. Larson, E. Vitkin, L. Guo, E. B. Hanlon, I. Itzkan, K. V. Sokolov, and L. T. Perelman, “Gold nanorod light scattering labels for biomedical imaging,” Biomed. Opt. Express 1(1), 135–142 (2010).
[CrossRef]

F. Tellier, R. Ravelo, H. Simon, R. Chabrier, J. Steibel, and P. Poulet, “Sentinel lymph node detection by an optical method using scattered photons,” Biomed. Opt. Express 1(3), 902–910 (2010).
[CrossRef]

F. E. Robles, S. Chowdhury, and A. Wax, “Assessing hemoglobin concentration using spectroscopic optical coherence tomography for feasibility of tissue diagnostics,” Biomed. Opt. Express 1(1), 310–317 (2010).
[CrossRef]

R. J. Cooper, R. Eames, J. Brunker, L. C. Enfield, A. P. Gibson, and J. C. Hebden, “A tissue equivalent phantom for simultaneous near-infrared optical tomography and EEG,” Biomed. Opt. Express 1(2), 425–430 (2010).
[CrossRef]

T. C. Wood and D. S. Elson, “Polarization response measurement and simulation of rigid endoscopes,” Biomed. Opt. Express 1(2), 463–470 (2010).
[CrossRef]

V. Venugopal, J. Chen, and X. Intes, “Development of an optical imaging platform for functional imaging of small animals using wide-field excitation,” Biomed. Opt. Express 1(1), 143–156 (2010).
[CrossRef]

S. A. Carp, G. P. Dai, D. A. Boas, M. A. Franceschini, and Y. R. Kim, “Validation of diffuse correlation spectroscopy measurements of rodent cerebral blood flow with simultaneous arterial spin labeling MRI; towards MRI-optical continuous cerebral metabolic monitoring,” Biomed. Opt. Express 1(2), 553–565 (2010).
[CrossRef]

D. K. Chen, M. K. Erb, Y. Tong, Y. Yu, A. Sassaroli, P. R. Bergethon, and S. Fantini, “Spectral and spatial dependence of diffuse optical signals in response to peripheral nerve stimulation,” Biomed. Opt. Express 1(3), 923–942 (2010).
[CrossRef]

M. K. Erb, D. K. Chen, A. Sassaroli, S. Fantini, and P. R. Bergethon, “Diffuse optical signals in response to peripheral nerve stimulation reflect skeletal muscle kinematics,” Biomed. Opt. Express 1(3), 943–954 (2010).
[CrossRef]

Yu. Shang, T. B. Symons, T. Durduran, A. G. Yodh, and G. Yu, “Effects of muscle fiber motion on diffuse correlation spectroscopy blood flow measurements during exercise,” Biomed. Opt. Express 1(2), 500–511 (2010).
[CrossRef]

M. Antkowiak, M. L. Torres-Mapa, K. Dholakia, and F. J. Gunn-Moore, “Quantitative phase study of the dynamic cellular response in femtosecond laser photoporation,” Biomed. Opt. Express 1(2), 414–424 (2010).
[CrossRef]

R. M. Pasternack, B. Rabin, J.-Y. Zheng, and N. N. Boustany, “Quantifying subcellular dynamics in apoptotic cells with two-dimensional Gabor filters,” Biomed. Opt. Express 1(2), 720–728 (2010) (Invited).
[CrossRef]

Antkowiak, M.

Arridge, S.

Arridge, S. R.

Bassi, A.

Bergethon, P. R.

Boas, D. A.

Bouchard, M. B.

Boustany, N. N.

Brunker, J.

Caldera, L.

Carp, S. A.

Chabrier, R.

Chang, C.-W.

Chen, D. K.

Chen, J.

Choudhury, N.

Chowdhury, S.

Cooper, R. J.

D’Andrea, C.

Dai, G. P.

Dholakia, K.

Ducros, N.

Durduran, T.

Eames, R.

Elson, D. S.

Enfield, L. C.

Erb, M. K.

Erickson, S. J.

Fang, Q.

Fantini, S.

Flexman, M.

Franceschini, M. A.

Ghadyani, H. R.

Gibson, A. P.

Gillispie, G. D.

Godavarty, A.

Gonzalez, J.

Gunn-Moore, F. J.

Guo, L.

Hanlon, E. B.

Hebden, J. C.

Hielscher, A. H.

Hillman, E. M. C.

Intes, X.

Itzkan, I.

Jacques, S. L.

Kaipio, J. P.

Kandel, J. J.

Khadka, S.

Kim, H. K.

Kim, Y. R.

Klose, A. D.

Kolehmainen, V.

Kopans, D. B.

Larson, T. A.

Lin, Z.-J.

Liu, H.

Lloyd, W. R.

Martinez, S. L.

Montejo, L. D.

Moore, R. H.

Mycek, M.-A.

Niu, H.

Pasternack, R. M.

Paulsen, K. D.

Perelman, L. T.

Pogue, B. W.

Poulet, P.

Qiu, L.

Rabin, B.

Ravelo, R.

Robles, F. E.

Samatham, R.

Sassaroli, A.

Shang, Yu.

Simon, H.

Sokolov, K. V.

Srinivasan, S.

Steibel, J.

Sun, R.

Symons, T. B.

Tarvainen, T.

Tellier, F.

Tian, F.

Tong, Y.

Torres-Mapa, M. L.

Valentini, G.

Venugopal, V.

Vitkin, E.

Wax, A.

Wilson, R. H.

Wood, T. C.

Yamashiro, D. J.

Yodh, A. G.

Yu, G.

Yu, Y.

Zheng, J.-Y.

Biomed. Opt. Express

S. Srinivasan, H. R. Ghadyani, B. W. Pogue, and K. D. Paulsen, “A coupled finite element-boundary element method for modeling Diffusion equation in 3D multi-modality optical imaging,” Biomed. Opt. Express 1(2), 398–413 (2010).
[CrossRef]

Q. Fang, R. H. Moore, D. B. Kopans, and D. A. Boas, “Compositional-prior-guided image reconstruction algorithm for multi-modality imaging,” Biomed. Opt. Express 1(1), 223–235 (2010).
[CrossRef]

T. Tarvainen, V. Kolehmainen, J. P. Kaipio, and S. R. Arridge, “Corrections to linear methods for diffuse optical tomography using approximation error modeling,” Biomed. Opt. Express 1(1), 209–222 (2010).
[CrossRef]

F. Tian, H. Niu, S. Khadka, Z.-J. Lin, and H. Liu, “Algorithmic depth compensation improves quantification and noise suppression in functional diffuse optical tomography,” Biomed. Opt. Express 1(2), 441–452 (2010).
[CrossRef]

L. D. Montejo, A. D. Klose, and A. H. Hielscher, “Implementation of the equation of radiative transfer on block-structured grids for modeling light propagation in tissue,” Biomed. Opt. Express 1(3), 861–878 (2010).
[CrossRef]

H. K. Kim, M. Flexman, D. J. Yamashiro, J. J. Kandel, and A. H. Hielscher, “PDE-constrained multispectral imaging of tissue chromophores with the equation of radiative transfer,” Biomed. Opt. Express 1(3), 812–824 (2010).
[CrossRef]

C. D’Andrea, N. Ducros, A. Bassi, S. Arridge, and G. Valentini, “Fast 3D optical reconstruction in turbid media using spatially modulated light,” Biomed. Opt. Express 1(2), 471–481 (2010).
[CrossRef]

S. L. Jacques, R. Samatham, and N. Choudhury, “Rapid spectral analysis for spectral imaging,” Biomed. Opt. Express 1(1), 157–164 (2010).
[CrossRef]

S. J. Erickson, S. L. Martinez, J. Gonzalez, L. Caldera, and A. Godavarty, “Improved detection limits using a hand-held optical imager with coregistration capabilities,” Biomed. Opt. Express 1(1), 126–134 (2010).
[CrossRef]

W. R. Lloyd, R. H. Wilson, C.-W. Chang, G. D. Gillispie, and M.-A. Mycek, “Instrumentation to rapidly acquire fluorescence wavelength-time matrices of biological tissues,” Biomed. Opt. Express 1(2), 574–586 (2010).
[CrossRef]

R. Sun, M. B. Bouchard, and E. M. C. Hillman, “SPLASSH: Open source software for camera-based high-speed, multispectral in-vivo optical image acquisition,” Biomed. Opt. Express 1(2), 385–397 (2010).
[CrossRef]

L. Qiu, T. A. Larson, E. Vitkin, L. Guo, E. B. Hanlon, I. Itzkan, K. V. Sokolov, and L. T. Perelman, “Gold nanorod light scattering labels for biomedical imaging,” Biomed. Opt. Express 1(1), 135–142 (2010).
[CrossRef]

F. Tellier, R. Ravelo, H. Simon, R. Chabrier, J. Steibel, and P. Poulet, “Sentinel lymph node detection by an optical method using scattered photons,” Biomed. Opt. Express 1(3), 902–910 (2010).
[CrossRef]

F. E. Robles, S. Chowdhury, and A. Wax, “Assessing hemoglobin concentration using spectroscopic optical coherence tomography for feasibility of tissue diagnostics,” Biomed. Opt. Express 1(1), 310–317 (2010).
[CrossRef]

R. J. Cooper, R. Eames, J. Brunker, L. C. Enfield, A. P. Gibson, and J. C. Hebden, “A tissue equivalent phantom for simultaneous near-infrared optical tomography and EEG,” Biomed. Opt. Express 1(2), 425–430 (2010).
[CrossRef]

T. C. Wood and D. S. Elson, “Polarization response measurement and simulation of rigid endoscopes,” Biomed. Opt. Express 1(2), 463–470 (2010).
[CrossRef]

V. Venugopal, J. Chen, and X. Intes, “Development of an optical imaging platform for functional imaging of small animals using wide-field excitation,” Biomed. Opt. Express 1(1), 143–156 (2010).
[CrossRef]

S. A. Carp, G. P. Dai, D. A. Boas, M. A. Franceschini, and Y. R. Kim, “Validation of diffuse correlation spectroscopy measurements of rodent cerebral blood flow with simultaneous arterial spin labeling MRI; towards MRI-optical continuous cerebral metabolic monitoring,” Biomed. Opt. Express 1(2), 553–565 (2010).
[CrossRef]

D. K. Chen, M. K. Erb, Y. Tong, Y. Yu, A. Sassaroli, P. R. Bergethon, and S. Fantini, “Spectral and spatial dependence of diffuse optical signals in response to peripheral nerve stimulation,” Biomed. Opt. Express 1(3), 923–942 (2010).
[CrossRef]

M. K. Erb, D. K. Chen, A. Sassaroli, S. Fantini, and P. R. Bergethon, “Diffuse optical signals in response to peripheral nerve stimulation reflect skeletal muscle kinematics,” Biomed. Opt. Express 1(3), 943–954 (2010).
[CrossRef]

Yu. Shang, T. B. Symons, T. Durduran, A. G. Yodh, and G. Yu, “Effects of muscle fiber motion on diffuse correlation spectroscopy blood flow measurements during exercise,” Biomed. Opt. Express 1(2), 500–511 (2010).
[CrossRef]

M. Antkowiak, M. L. Torres-Mapa, K. Dholakia, and F. J. Gunn-Moore, “Quantitative phase study of the dynamic cellular response in femtosecond laser photoporation,” Biomed. Opt. Express 1(2), 414–424 (2010).
[CrossRef]

R. M. Pasternack, B. Rabin, J.-Y. Zheng, and N. N. Boustany, “Quantifying subcellular dynamics in apoptotic cells with two-dimensional Gabor filters,” Biomed. Opt. Express 1(2), 720–728 (2010) (Invited).
[CrossRef]

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