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[CrossRef]

X. Ma, J. Tian, C. Qin, X. Yang, B. Zhang, Z. Xue, X. Zhang, D. Han, D. Dong, and X. Liu, “Early detection of liver cancer based on bioluminescence tomography,” Appl. Opt. 50, 1389–1395 (2011).

[CrossRef]

H. Gao and H. Zhao, “Multilevel bioluminescence tomography based on radiative transfer equation. Part 1: L1 regularization,” Opt. Express 18, 1854–1871 (2010).

[CrossRef]

K. Liu, J. Tian, X. Yang, Y. Lu, C. Qin, S. Zhu, and X. Zhang, “A fast bioluminescent source localization method based on generalized graph cuts with mouse model validations,” Opt. Express 18, 3732–3745 (2010).

[CrossRef]

K. Liu, J. Tian, Y. Lu, C. Qin, X. Yang, S. Zhu, and X. Zhang, “A fast bioluminescent source localization method based on generalized graph cuts with mouse model validations,” Opt. Express 18, 3732–3745 (2010).

[CrossRef]

B. Zhang, X. Yang, C. Qin, D. Liu, S. Zhu, J. Feng, L. Sun, K. Liu, D. Han, X. Ma, X. Zhang, J. Zhong, X. Li, X. Yang, and J. Tian, “A trust region method in adaptive finite element framework for bioluminescence tomography,” Opt. Express 18, 6477–6491 (2010).

[CrossRef]

D. Han, J. Tian, S. Zhu, J. Feng, C. Qin, B. Zhang, and X. Yang, “A fast reconstruction algorithm for fluorescence molecular tomography with sparsity regularization,” Opt. Express 18, 8630–8646 (2010).

[CrossRef]

M. Freiberger, C. Clason, and H. Scharfetter, “Total variation regularization for nonlinear fluorescence tomography with an augmented Lagrangian splitting approach,” Appl. Opt. 49, 3741–3747 (2010).

[CrossRef]

H. Gao, H. Zhao, W. Cong, and G. Wang, “Bioluminescence tomography with Gaussian prior,” Biomed. Opt. Express 1, 1259–1277 (2010).

[CrossRef]

X. He, J. Liang, X. Wang, J. Yu, X. Qu, X. Wang, Y. Hou, D. Chen, F. Liu, and J. Tian, “Sparse reconstruction for quantitative bioluminescence tomography based on the incomplete variables truncated conjugate gradient method,” Opt. Express 18, 24825–24841 (2010).

[CrossRef]

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[CrossRef]

J. M. Bioucas-Dias and M. A. T. Figueiredo, “Multiplicative noise removal using variable splitting and constrained optimization,” IEEE Trans. Image Process. 19, 1720–1730 (2010).

[CrossRef]

A. Cong, W. Cong, Y. Lu, P. Santago, A. Chatziioannou, and G. Wang, “Differential evolution approach for regularized bioluminescence tomography,” IEEE Trans. Biomed. Eng. 57, 2229–2238 (2010).

[CrossRef]

X. He, J. Liang, X. Qu, H. Huang, Y. Hou, and J. Tian, “Truncated total least squares method with a practical truncation parameter choice scheme for bioluminescence tomography inverse problem,” Int. J. Biomed. Imaging 2010, 291874 (2010).

[CrossRef]

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[CrossRef]

Y. Lu, X. Zhang, A. Douraghy, D. Stout, J. Tian, T. F. Chan, and A. F. Chatziioannou, “Source reconstruction for spectrally-resolved bioluminescence tomography with sparse a priori information,” Opt. Express 17, 8062–8080 (2009).

[CrossRef]

Y. Lu, H. B. Machado, A. Douraghy, D. Stout, H. Herschman, and A. F. Chatziioannou, “Experimental bioluminescence tomography with fully parallel radiative-transfer-based reconstruction framework,” Opt. Express 17, 16681–16695 (2009).

[CrossRef]

J. Feng, K. Jia, C. Qin, G. Yan, S. Zhu, X. Zhang, J. Liu, and J. Tian, “Three-dimensional bioluminescence tomography based on Bayesian approach,” Opt. Express 17, 16834–16848 (2009).

[CrossRef]

C. Qin, J. Tian, X. Yang, J. Feng, K. Liu, J. Liu, G. Yan, S. Zhu, and M. Xu, “Adaptive improved element free Galerkin method for quasi- or multi-spectral bioluminescence tomography,” Opt. Express 17, 21925–21934 (2009).

[CrossRef]

S. Ahn, A. J. Chaudhari, F. Darvas, C. A. Bouman, and R. M. Leahy, “Fast iterative image reconstruction methods for fully 3D multispectral bioluminescence tomography,” Phys. Med. Biol. 53, 3921–3942 (2008).

[CrossRef]

J. K. Willmann, N. van Bruggen, L. M. Dinkelborg, and S. S. Gambhir, “Molecular imaging in drug development,” Nat. Rev. Drug Discov. 7, 591–607 (2008).

[CrossRef]

J. Tian, J. Bai, X. Yan, S. Bao, Y. Li, W. Liang, and X. Yang, “Multimodality molecular imaging,” IEEE Eng. Med. Biol. Mag. 27(5), 48–57 (2008).

[CrossRef]

H. Dehghani, S. C. Davis, and B. W. Pogue, “Spectrally resolved bioluminescence tomography using the reciprocity approach,” Med. Phys. 35, 4863–4871 (2008).

[CrossRef]

J. Feng, K. Jia, G. Yan, S. Zhu, C. Qin, Y. Lv, and J. Tian, “An optimal permissible source region strategy for multispectral bioluminescence tomography,” Opt. Express 16, 15640–15654(2008).

[CrossRef]

C. Kuo, O. Coquoz, T. L. Troy, H. Xu, and B. W. Rice, “Three-dimensional reconstruction of in vivo bioluminescent sources based on multispectral imaging,” J. Biomed. Opt. 12, 024007 (2007).

[CrossRef]

A. M. Loening, A. M. Wu, and S. S. Gambhir, “Red-shifted Renilla reniformis luciferase variants for imaging in living subjects,” Nat. Med. 4, 641–643 (2007).

[CrossRef]

S. Kim, K. Koh, M. Lustig, S. Boyd, and D. Gorinevsky, “An interior-point method for large-scale L1-regularized least squares,” IEEE J. Sel. Top. Signal Process. 1, 606–617 (2007).

[CrossRef]

Y. Lu, J. Tian, W. Cong, G. Wang, W. Yang, C. Qin, and M. Xu, “Spectrally resolved bioluminescence tomography with adaptive finite element analysis: methodology and simulation,” Phys. Med. Biol. 52, 4497–4512 (2007).

[CrossRef]

H. Dehghani, S. C. Davis, S. Jiang, B. W. Pogue, K. D. Paulsen, and M. S. Patterson, “Spectrally resolved bioluminescence optical tomography,” Opt. Lett. 31, 365–367 (2006).

[CrossRef]

G. Wang, W. Cong, K. Durairaj, X. Qian, H. O. Shen, P. Sinn, E. Hoffman, G. McLennan, and M. Henry, “In vivo mouse studies with bioluminescence tomography,” Opt. Express 14, 7801–7809 (2006).

[CrossRef]

Y. Lu, J. Tian, W. Cong, G. Wang, J. Luo, W. Yang, and H. Li, “A multilevel adaptive finite element algorithm for bioluminescence tomography,” Opt. Express 14, 8211–8223 (2006).

[CrossRef]

G. Alexandrakis, F. R. Rannou, and A. F. Chatziioannou, “Tomographic bioluminescence imaging by use of a combined optical-PET (OPET) system: a computer simulation feasibility study,” Phys. Med. Biol. 50, 4225–4241 (2005).

[CrossRef]

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[CrossRef]

A. D. Klose, V. Ntziachristos, and A. H. Hielscher, “The inverse source problem based on the radiative transfer equation in optical molecular imaging,” J. Comput. Phys. 202, 323–345 (2005).

[CrossRef]

G. Wang, Y. Li, and M. Jiang, “Uniqueness theorems in bioluminescence tomography,” Med. Phys. 31, 2289–2299 (2004).

[CrossRef]

M. Schweiger, S. R. Arridge, M. Hiraoka, and D. T. Delpy, “The finite element method for the propagation of light in scattering media: boundary and source conditions,” Med. Phys. 22, 1779–1792 (1995).

[CrossRef]

S. Ahn, A. J. Chaudhari, F. Darvas, C. A. Bouman, and R. M. Leahy, “Fast iterative image reconstruction methods for fully 3D multispectral bioluminescence tomography,” Phys. Med. Biol. 53, 3921–3942 (2008).

[CrossRef]

G. Alexandrakis, F. R. Rannou, and A. F. Chatziioannou, “Tomographic bioluminescence imaging by use of a combined optical-PET (OPET) system: a computer simulation feasibility study,” Phys. Med. Biol. 50, 4225–4241 (2005).

[CrossRef]

M. Schweiger, S. R. Arridge, M. Hiraoka, and D. T. Delpy, “The finite element method for the propagation of light in scattering media: boundary and source conditions,” Med. Phys. 22, 1779–1792 (1995).

[CrossRef]

J. Tian, J. Bai, X. Yan, S. Bao, Y. Li, W. Liang, and X. Yang, “Multimodality molecular imaging,” IEEE Eng. Med. Biol. Mag. 27(5), 48–57 (2008).

[CrossRef]

J. Tian, J. Bai, X. Yan, S. Bao, Y. Li, W. Liang, and X. Yang, “Multimodality molecular imaging,” IEEE Eng. Med. Biol. Mag. 27(5), 48–57 (2008).

[CrossRef]

J. M. Bioucas-Dias and M. A. T. Figueiredo, “Multiplicative noise removal using variable splitting and constrained optimization,” IEEE Trans. Image Process. 19, 1720–1730 (2010).

[CrossRef]

S. Ahn, A. J. Chaudhari, F. Darvas, C. A. Bouman, and R. M. Leahy, “Fast iterative image reconstruction methods for fully 3D multispectral bioluminescence tomography,” Phys. Med. Biol. 53, 3921–3942 (2008).

[CrossRef]

S. Kim, K. Koh, M. Lustig, S. Boyd, and D. Gorinevsky, “An interior-point method for large-scale L1-regularized least squares,” IEEE J. Sel. Top. Signal Process. 1, 606–617 (2007).

[CrossRef]

A. Cong, W. Cong, Y. Lu, P. Santago, A. Chatziioannou, and G. Wang, “Differential evolution approach for regularized bioluminescence tomography,” IEEE Trans. Biomed. Eng. 57, 2229–2238 (2010).

[CrossRef]

Y. Lu, X. Zhang, A. Douraghy, D. Stout, J. Tian, T. F. Chan, and A. F. Chatziioannou, “Source reconstruction for spectrally-resolved bioluminescence tomography with sparse a priori information,” Opt. Express 17, 8062–8080 (2009).

[CrossRef]

Y. Lu, H. B. Machado, A. Douraghy, D. Stout, H. Herschman, and A. F. Chatziioannou, “Experimental bioluminescence tomography with fully parallel radiative-transfer-based reconstruction framework,” Opt. Express 17, 16681–16695 (2009).

[CrossRef]

G. Alexandrakis, F. R. Rannou, and A. F. Chatziioannou, “Tomographic bioluminescence imaging by use of a combined optical-PET (OPET) system: a computer simulation feasibility study,” Phys. Med. Biol. 50, 4225–4241 (2005).

[CrossRef]

S. Ahn, A. J. Chaudhari, F. Darvas, C. A. Bouman, and R. M. Leahy, “Fast iterative image reconstruction methods for fully 3D multispectral bioluminescence tomography,” Phys. Med. Biol. 53, 3921–3942 (2008).

[CrossRef]

X. He, J. Liang, X. Wang, J. Yu, X. Qu, X. Wang, Y. Hou, D. Chen, F. Liu, and J. Tian, “Sparse reconstruction for quantitative bioluminescence tomography based on the incomplete variables truncated conjugate gradient method,” Opt. Express 18, 24825–24841 (2010).

[CrossRef]

A. Cong, W. Cong, Y. Lu, P. Santago, A. Chatziioannou, and G. Wang, “Differential evolution approach for regularized bioluminescence tomography,” IEEE Trans. Biomed. Eng. 57, 2229–2238 (2010).

[CrossRef]

A. Cong, W. Cong, Y. Lu, P. Santago, A. Chatziioannou, and G. Wang, “Differential evolution approach for regularized bioluminescence tomography,” IEEE Trans. Biomed. Eng. 57, 2229–2238 (2010).

[CrossRef]

H. Gao, H. Zhao, W. Cong, and G. Wang, “Bioluminescence tomography with Gaussian prior,” Biomed. Opt. Express 1, 1259–1277 (2010).

[CrossRef]

Y. Lu, J. Tian, W. Cong, G. Wang, W. Yang, C. Qin, and M. Xu, “Spectrally resolved bioluminescence tomography with adaptive finite element analysis: methodology and simulation,” Phys. Med. Biol. 52, 4497–4512 (2007).

[CrossRef]

G. Wang, W. Cong, K. Durairaj, X. Qian, H. O. Shen, P. Sinn, E. Hoffman, G. McLennan, and M. Henry, “In vivo mouse studies with bioluminescence tomography,” Opt. Express 14, 7801–7809 (2006).

[CrossRef]

Y. Lu, J. Tian, W. Cong, G. Wang, J. Luo, W. Yang, and H. Li, “A multilevel adaptive finite element algorithm for bioluminescence tomography,” Opt. Express 14, 8211–8223 (2006).

[CrossRef]

C. Kuo, O. Coquoz, T. L. Troy, H. Xu, and B. W. Rice, “Three-dimensional reconstruction of in vivo bioluminescent sources based on multispectral imaging,” J. Biomed. Opt. 12, 024007 (2007).

[CrossRef]

S. Ahn, A. J. Chaudhari, F. Darvas, C. A. Bouman, and R. M. Leahy, “Fast iterative image reconstruction methods for fully 3D multispectral bioluminescence tomography,” Phys. Med. Biol. 53, 3921–3942 (2008).

[CrossRef]

H. Dehghani, S. C. Davis, and B. W. Pogue, “Spectrally resolved bioluminescence tomography using the reciprocity approach,” Med. Phys. 35, 4863–4871 (2008).

[CrossRef]

H. Dehghani, S. C. Davis, S. Jiang, B. W. Pogue, K. D. Paulsen, and M. S. Patterson, “Spectrally resolved bioluminescence optical tomography,” Opt. Lett. 31, 365–367 (2006).

[CrossRef]

H. Dehghani, S. C. Davis, and B. W. Pogue, “Spectrally resolved bioluminescence tomography using the reciprocity approach,” Med. Phys. 35, 4863–4871 (2008).

[CrossRef]

H. Dehghani, S. C. Davis, S. Jiang, B. W. Pogue, K. D. Paulsen, and M. S. Patterson, “Spectrally resolved bioluminescence optical tomography,” Opt. Lett. 31, 365–367 (2006).

[CrossRef]

M. Schweiger, S. R. Arridge, M. Hiraoka, and D. T. Delpy, “The finite element method for the propagation of light in scattering media: boundary and source conditions,” Med. Phys. 22, 1779–1792 (1995).

[CrossRef]

J. K. Willmann, N. van Bruggen, L. M. Dinkelborg, and S. S. Gambhir, “Molecular imaging in drug development,” Nat. Rev. Drug Discov. 7, 591–607 (2008).

[CrossRef]

X. Ma, J. Tian, C. Qin, X. Yang, B. Zhang, Z. Xue, X. Zhang, D. Han, D. Dong, and X. Liu, “Early detection of liver cancer based on bioluminescence tomography,” Appl. Opt. 50, 1389–1395 (2011).

[CrossRef]

Y. Lu, X. Zhang, A. Douraghy, D. Stout, J. Tian, T. F. Chan, and A. F. Chatziioannou, “Source reconstruction for spectrally-resolved bioluminescence tomography with sparse a priori information,” Opt. Express 17, 8062–8080 (2009).

[CrossRef]

Y. Lu, H. B. Machado, A. Douraghy, D. Stout, H. Herschman, and A. F. Chatziioannou, “Experimental bioluminescence tomography with fully parallel radiative-transfer-based reconstruction framework,” Opt. Express 17, 16681–16695 (2009).

[CrossRef]

G. Wang, W. Cong, K. Durairaj, X. Qian, H. O. Shen, P. Sinn, E. Hoffman, G. McLennan, and M. Henry, “In vivo mouse studies with bioluminescence tomography,” Opt. Express 14, 7801–7809 (2006).

[CrossRef]

B. Zhang, X. Yang, C. Qin, D. Liu, S. Zhu, J. Feng, L. Sun, K. Liu, D. Han, X. Ma, X. Zhang, J. Zhong, X. Li, X. Yang, and J. Tian, “A trust region method in adaptive finite element framework for bioluminescence tomography,” Opt. Express 18, 6477–6491 (2010).

[CrossRef]

D. Han, J. Tian, S. Zhu, J. Feng, C. Qin, B. Zhang, and X. Yang, “A fast reconstruction algorithm for fluorescence molecular tomography with sparsity regularization,” Opt. Express 18, 8630–8646 (2010).

[CrossRef]

J. Feng, K. Jia, C. Qin, G. Yan, S. Zhu, X. Zhang, J. Liu, and J. Tian, “Three-dimensional bioluminescence tomography based on Bayesian approach,” Opt. Express 17, 16834–16848 (2009).

[CrossRef]

C. Qin, J. Tian, X. Yang, J. Feng, K. Liu, J. Liu, G. Yan, S. Zhu, and M. Xu, “Adaptive improved element free Galerkin method for quasi- or multi-spectral bioluminescence tomography,” Opt. Express 17, 21925–21934 (2009).

[CrossRef]

J. Feng, K. Jia, G. Yan, S. Zhu, C. Qin, Y. Lv, and J. Tian, “An optimal permissible source region strategy for multispectral bioluminescence tomography,” Opt. Express 16, 15640–15654(2008).

[CrossRef]

J. M. Bioucas-Dias and M. A. T. Figueiredo, “Multiplicative noise removal using variable splitting and constrained optimization,” IEEE Trans. Image Process. 19, 1720–1730 (2010).

[CrossRef]

J. K. Willmann, N. van Bruggen, L. M. Dinkelborg, and S. S. Gambhir, “Molecular imaging in drug development,” Nat. Rev. Drug Discov. 7, 591–607 (2008).

[CrossRef]

A. M. Loening, A. M. Wu, and S. S. Gambhir, “Red-shifted Renilla reniformis luciferase variants for imaging in living subjects,” Nat. Med. 4, 641–643 (2007).

[CrossRef]

S. Kim, K. Koh, M. Lustig, S. Boyd, and D. Gorinevsky, “An interior-point method for large-scale L1-regularized least squares,” IEEE J. Sel. Top. Signal Process. 1, 606–617 (2007).

[CrossRef]

D. Han, J. Tian, C. Qin, B. Zhang, K. Liu, and X. Ma, “A fast reconstruction method for fluorescence molecular tomography based on improved iterated shrinkage,” Proc. SPIE 7965, 79651C (2011).

[CrossRef]

X. Ma, J. Tian, C. Qin, X. Yang, B. Zhang, Z. Xue, X. Zhang, D. Han, D. Dong, and X. Liu, “Early detection of liver cancer based on bioluminescence tomography,” Appl. Opt. 50, 1389–1395 (2011).

[CrossRef]

D. Han, J. Tian, S. Zhu, J. Feng, C. Qin, B. Zhang, and X. Yang, “A fast reconstruction algorithm for fluorescence molecular tomography with sparsity regularization,” Opt. Express 18, 8630–8646 (2010).

[CrossRef]

B. Zhang, X. Yang, C. Qin, D. Liu, S. Zhu, J. Feng, L. Sun, K. Liu, D. Han, X. Ma, X. Zhang, J. Zhong, X. Li, X. Yang, and J. Tian, “A trust region method in adaptive finite element framework for bioluminescence tomography,” Opt. Express 18, 6477–6491 (2010).

[CrossRef]

X. He, J. Liang, X. Wang, J. Yu, X. Qu, X. Wang, Y. Hou, D. Chen, F. Liu, and J. Tian, “Sparse reconstruction for quantitative bioluminescence tomography based on the incomplete variables truncated conjugate gradient method,” Opt. Express 18, 24825–24841 (2010).

[CrossRef]

X. He, J. Liang, X. Qu, H. Huang, Y. Hou, and J. Tian, “Truncated total least squares method with a practical truncation parameter choice scheme for bioluminescence tomography inverse problem,” Int. J. Biomed. Imaging 2010, 291874 (2010).

[CrossRef]

G. Wang, W. Cong, K. Durairaj, X. Qian, H. O. Shen, P. Sinn, E. Hoffman, G. McLennan, and M. Henry, “In vivo mouse studies with bioluminescence tomography,” Opt. Express 14, 7801–7809 (2006).

[CrossRef]

A. D. Klose, V. Ntziachristos, and A. H. Hielscher, “The inverse source problem based on the radiative transfer equation in optical molecular imaging,” J. Comput. Phys. 202, 323–345 (2005).

[CrossRef]

M. Schweiger, S. R. Arridge, M. Hiraoka, and D. T. Delpy, “The finite element method for the propagation of light in scattering media: boundary and source conditions,” Med. Phys. 22, 1779–1792 (1995).

[CrossRef]

G. Wang, W. Cong, K. Durairaj, X. Qian, H. O. Shen, P. Sinn, E. Hoffman, G. McLennan, and M. Henry, “In vivo mouse studies with bioluminescence tomography,” Opt. Express 14, 7801–7809 (2006).

[CrossRef]

X. He, J. Liang, X. Qu, H. Huang, Y. Hou, and J. Tian, “Truncated total least squares method with a practical truncation parameter choice scheme for bioluminescence tomography inverse problem,” Int. J. Biomed. Imaging 2010, 291874 (2010).

[CrossRef]

X. He, J. Liang, X. Wang, J. Yu, X. Qu, X. Wang, Y. Hou, D. Chen, F. Liu, and J. Tian, “Sparse reconstruction for quantitative bioluminescence tomography based on the incomplete variables truncated conjugate gradient method,” Opt. Express 18, 24825–24841 (2010).

[CrossRef]

X. He, J. Liang, X. Qu, H. Huang, Y. Hou, and J. Tian, “Truncated total least squares method with a practical truncation parameter choice scheme for bioluminescence tomography inverse problem,” Int. J. Biomed. Imaging 2010, 291874 (2010).

[CrossRef]

J. Feng, K. Jia, C. Qin, G. Yan, S. Zhu, X. Zhang, J. Liu, and J. Tian, “Three-dimensional bioluminescence tomography based on Bayesian approach,” Opt. Express 17, 16834–16848 (2009).

[CrossRef]

J. Feng, K. Jia, G. Yan, S. Zhu, C. Qin, Y. Lv, and J. Tian, “An optimal permissible source region strategy for multispectral bioluminescence tomography,” Opt. Express 16, 15640–15654(2008).

[CrossRef]

G. Wang, Y. Li, and M. Jiang, “Uniqueness theorems in bioluminescence tomography,” Med. Phys. 31, 2289–2299 (2004).

[CrossRef]

S. Kim, K. Koh, M. Lustig, S. Boyd, and D. Gorinevsky, “An interior-point method for large-scale L1-regularized least squares,” IEEE J. Sel. Top. Signal Process. 1, 606–617 (2007).

[CrossRef]

A. D. Klose, V. Ntziachristos, and A. H. Hielscher, “The inverse source problem based on the radiative transfer equation in optical molecular imaging,” J. Comput. Phys. 202, 323–345 (2005).

[CrossRef]

S. Kim, K. Koh, M. Lustig, S. Boyd, and D. Gorinevsky, “An interior-point method for large-scale L1-regularized least squares,” IEEE J. Sel. Top. Signal Process. 1, 606–617 (2007).

[CrossRef]

C. Kuo, O. Coquoz, T. L. Troy, H. Xu, and B. W. Rice, “Three-dimensional reconstruction of in vivo bioluminescent sources based on multispectral imaging,” J. Biomed. Opt. 12, 024007 (2007).

[CrossRef]

S. Ahn, A. J. Chaudhari, F. Darvas, C. A. Bouman, and R. M. Leahy, “Fast iterative image reconstruction methods for fully 3D multispectral bioluminescence tomography,” Phys. Med. Biol. 53, 3921–3942 (2008).

[CrossRef]

B. Zhang, X. Yang, C. Qin, D. Liu, S. Zhu, J. Feng, L. Sun, K. Liu, D. Han, X. Ma, X. Zhang, J. Zhong, X. Li, X. Yang, and J. Tian, “A trust region method in adaptive finite element framework for bioluminescence tomography,” Opt. Express 18, 6477–6491 (2010).

[CrossRef]

J. Tian, J. Bai, X. Yan, S. Bao, Y. Li, W. Liang, and X. Yang, “Multimodality molecular imaging,” IEEE Eng. Med. Biol. Mag. 27(5), 48–57 (2008).

[CrossRef]

G. Wang, Y. Li, and M. Jiang, “Uniqueness theorems in bioluminescence tomography,” Med. Phys. 31, 2289–2299 (2004).

[CrossRef]

X. He, J. Liang, X. Qu, H. Huang, Y. Hou, and J. Tian, “Truncated total least squares method with a practical truncation parameter choice scheme for bioluminescence tomography inverse problem,” Int. J. Biomed. Imaging 2010, 291874 (2010).

[CrossRef]

X. He, J. Liang, X. Wang, J. Yu, X. Qu, X. Wang, Y. Hou, D. Chen, F. Liu, and J. Tian, “Sparse reconstruction for quantitative bioluminescence tomography based on the incomplete variables truncated conjugate gradient method,” Opt. Express 18, 24825–24841 (2010).

[CrossRef]

J. Tian, J. Bai, X. Yan, S. Bao, Y. Li, W. Liang, and X. Yang, “Multimodality molecular imaging,” IEEE Eng. Med. Biol. Mag. 27(5), 48–57 (2008).

[CrossRef]

B. Zhang, X. Yang, C. Qin, D. Liu, S. Zhu, J. Feng, L. Sun, K. Liu, D. Han, X. Ma, X. Zhang, J. Zhong, X. Li, X. Yang, and J. Tian, “A trust region method in adaptive finite element framework for bioluminescence tomography,” Opt. Express 18, 6477–6491 (2010).

[CrossRef]

X. He, J. Liang, X. Wang, J. Yu, X. Qu, X. Wang, Y. Hou, D. Chen, F. Liu, and J. Tian, “Sparse reconstruction for quantitative bioluminescence tomography based on the incomplete variables truncated conjugate gradient method,” Opt. Express 18, 24825–24841 (2010).

[CrossRef]

J. Feng, K. Jia, C. Qin, G. Yan, S. Zhu, X. Zhang, J. Liu, and J. Tian, “Three-dimensional bioluminescence tomography based on Bayesian approach,” Opt. Express 17, 16834–16848 (2009).

[CrossRef]

C. Qin, J. Tian, X. Yang, J. Feng, K. Liu, J. Liu, G. Yan, S. Zhu, and M. Xu, “Adaptive improved element free Galerkin method for quasi- or multi-spectral bioluminescence tomography,” Opt. Express 17, 21925–21934 (2009).

[CrossRef]

D. Han, J. Tian, C. Qin, B. Zhang, K. Liu, and X. Ma, “A fast reconstruction method for fluorescence molecular tomography based on improved iterated shrinkage,” Proc. SPIE 7965, 79651C (2011).

[CrossRef]

B. Zhang, X. Yang, C. Qin, D. Liu, S. Zhu, J. Feng, L. Sun, K. Liu, D. Han, X. Ma, X. Zhang, J. Zhong, X. Li, X. Yang, and J. Tian, “A trust region method in adaptive finite element framework for bioluminescence tomography,” Opt. Express 18, 6477–6491 (2010).

[CrossRef]

K. Liu, J. Tian, X. Yang, Y. Lu, C. Qin, S. Zhu, and X. Zhang, “A fast bioluminescent source localization method based on generalized graph cuts with mouse model validations,” Opt. Express 18, 3732–3745 (2010).

[CrossRef]

K. Liu, J. Tian, Y. Lu, C. Qin, X. Yang, S. Zhu, and X. Zhang, “A fast bioluminescent source localization method based on generalized graph cuts with mouse model validations,” Opt. Express 18, 3732–3745 (2010).

[CrossRef]

C. Qin, J. Tian, X. Yang, J. Feng, K. Liu, J. Liu, G. Yan, S. Zhu, and M. Xu, “Adaptive improved element free Galerkin method for quasi- or multi-spectral bioluminescence tomography,” Opt. Express 17, 21925–21934 (2009).

[CrossRef]

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X. Ma, J. Tian, C. Qin, X. Yang, B. Zhang, Z. Xue, X. Zhang, D. Han, D. Dong, and X. Liu, “Early detection of liver cancer based on bioluminescence tomography,” Appl. Opt. 50, 1389–1395 (2011).

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X. Ma, J. Tian, C. Qin, X. Yang, B. Zhang, Z. Xue, X. Zhang, D. Han, D. Dong, and X. Liu, “Early detection of liver cancer based on bioluminescence tomography,” Appl. Opt. 50, 1389–1395 (2011).

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K. Liu, J. Tian, Y. Lu, C. Qin, X. Yang, S. Zhu, and X. Zhang, “A fast bioluminescent source localization method based on generalized graph cuts with mouse model validations,” Opt. Express 18, 3732–3745 (2010).

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[CrossRef]

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[CrossRef]

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[CrossRef]

X. He, J. Liang, X. Wang, J. Yu, X. Qu, X. Wang, Y. Hou, D. Chen, F. Liu, and J. Tian, “Sparse reconstruction for quantitative bioluminescence tomography based on the incomplete variables truncated conjugate gradient method,” Opt. Express 18, 24825–24841 (2010).

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[CrossRef]

G. Wang, W. Cong, K. Durairaj, X. Qian, H. O. Shen, P. Sinn, E. Hoffman, G. McLennan, and M. Henry, “In vivo mouse studies with bioluminescence tomography,” Opt. Express 14, 7801–7809 (2006).

[CrossRef]

Y. Lu, H. B. Machado, A. Douraghy, D. Stout, H. Herschman, and A. F. Chatziioannou, “Experimental bioluminescence tomography with fully parallel radiative-transfer-based reconstruction framework,” Opt. Express 17, 16681–16695 (2009).

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[CrossRef]

X. Ma, J. Tian, C. Qin, X. Yang, B. Zhang, Z. Xue, X. Zhang, D. Han, D. Dong, and X. Liu, “Early detection of liver cancer based on bioluminescence tomography,” Appl. Opt. 50, 1389–1395 (2011).

[CrossRef]

X. He, J. Liang, X. Wang, J. Yu, X. Qu, X. Wang, Y. Hou, D. Chen, F. Liu, and J. Tian, “Sparse reconstruction for quantitative bioluminescence tomography based on the incomplete variables truncated conjugate gradient method,” Opt. Express 18, 24825–24841 (2010).

[CrossRef]

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[CrossRef]

B. Zhang, X. Yang, C. Qin, D. Liu, S. Zhu, J. Feng, L. Sun, K. Liu, D. Han, X. Ma, X. Zhang, J. Zhong, X. Li, X. Yang, and J. Tian, “A trust region method in adaptive finite element framework for bioluminescence tomography,” Opt. Express 18, 6477–6491 (2010).

[CrossRef]

K. Liu, J. Tian, X. Yang, Y. Lu, C. Qin, S. Zhu, and X. Zhang, “A fast bioluminescent source localization method based on generalized graph cuts with mouse model validations,” Opt. Express 18, 3732–3745 (2010).

[CrossRef]

K. Liu, J. Tian, Y. Lu, C. Qin, X. Yang, S. Zhu, and X. Zhang, “A fast bioluminescent source localization method based on generalized graph cuts with mouse model validations,” Opt. Express 18, 3732–3745 (2010).

[CrossRef]

X. He, J. Liang, X. Qu, H. Huang, Y. Hou, and J. Tian, “Truncated total least squares method with a practical truncation parameter choice scheme for bioluminescence tomography inverse problem,” Int. J. Biomed. Imaging 2010, 291874 (2010).

[CrossRef]

Y. Lu, X. Zhang, A. Douraghy, D. Stout, J. Tian, T. F. Chan, and A. F. Chatziioannou, “Source reconstruction for spectrally-resolved bioluminescence tomography with sparse a priori information,” Opt. Express 17, 8062–8080 (2009).

[CrossRef]

J. Feng, K. Jia, C. Qin, G. Yan, S. Zhu, X. Zhang, J. Liu, and J. Tian, “Three-dimensional bioluminescence tomography based on Bayesian approach,” Opt. Express 17, 16834–16848 (2009).

[CrossRef]

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[CrossRef]

J. Feng, K. Jia, G. Yan, S. Zhu, C. Qin, Y. Lv, and J. Tian, “An optimal permissible source region strategy for multispectral bioluminescence tomography,” Opt. Express 16, 15640–15654(2008).

[CrossRef]

J. Tian, J. Bai, X. Yan, S. Bao, Y. Li, W. Liang, and X. Yang, “Multimodality molecular imaging,” IEEE Eng. Med. Biol. Mag. 27(5), 48–57 (2008).

[CrossRef]

Y. Lu, J. Tian, W. Cong, G. Wang, W. Yang, C. Qin, and M. Xu, “Spectrally resolved bioluminescence tomography with adaptive finite element analysis: methodology and simulation,” Phys. Med. Biol. 52, 4497–4512 (2007).

[CrossRef]

Y. Lu, J. Tian, W. Cong, G. Wang, J. Luo, W. Yang, and H. Li, “A multilevel adaptive finite element algorithm for bioluminescence tomography,” Opt. Express 14, 8211–8223 (2006).

[CrossRef]

R. Tomioka and M. Sugiyama, “Dual augmented Lagrangian method for efficient sparse reconstruction,” IEEE Signal Process. Lett. 16, 1067–1070 (2009).

[CrossRef]

C. Kuo, O. Coquoz, T. L. Troy, H. Xu, and B. W. Rice, “Three-dimensional reconstruction of in vivo bioluminescent sources based on multispectral imaging,” J. Biomed. Opt. 12, 024007 (2007).

[CrossRef]

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[CrossRef]

A. Cong, W. Cong, Y. Lu, P. Santago, A. Chatziioannou, and G. Wang, “Differential evolution approach for regularized bioluminescence tomography,” IEEE Trans. Biomed. Eng. 57, 2229–2238 (2010).

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[CrossRef]

Y. Lu, J. Tian, W. Cong, G. Wang, J. Luo, W. Yang, and H. Li, “A multilevel adaptive finite element algorithm for bioluminescence tomography,” Opt. Express 14, 8211–8223 (2006).

[CrossRef]

G. Wang, W. Cong, K. Durairaj, X. Qian, H. O. Shen, P. Sinn, E. Hoffman, G. McLennan, and M. Henry, “In vivo mouse studies with bioluminescence tomography,” Opt. Express 14, 7801–7809 (2006).

[CrossRef]

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[CrossRef]

V. Ntziachristos, J. Ripoll, L. V. Wang, and R. Weissleder, “Looking and listening to light: the revolution of wholebody photonic imaging,” Nat. Biotechnol. 23, 313–320 (2005).

[CrossRef]

X. He, J. Liang, X. Wang, J. Yu, X. Qu, X. Wang, Y. Hou, D. Chen, F. Liu, and J. Tian, “Sparse reconstruction for quantitative bioluminescence tomography based on the incomplete variables truncated conjugate gradient method,” Opt. Express 18, 24825–24841 (2010).

[CrossRef]

X. He, J. Liang, X. Wang, J. Yu, X. Qu, X. Wang, Y. Hou, D. Chen, F. Liu, and J. Tian, “Sparse reconstruction for quantitative bioluminescence tomography based on the incomplete variables truncated conjugate gradient method,” Opt. Express 18, 24825–24841 (2010).

[CrossRef]

V. Ntziachristos, J. Ripoll, L. V. Wang, and R. Weissleder, “Looking and listening to light: the revolution of wholebody photonic imaging,” Nat. Biotechnol. 23, 313–320 (2005).

[CrossRef]

J. K. Willmann, N. van Bruggen, L. M. Dinkelborg, and S. S. Gambhir, “Molecular imaging in drug development,” Nat. Rev. Drug Discov. 7, 591–607 (2008).

[CrossRef]

A. M. Loening, A. M. Wu, and S. S. Gambhir, “Red-shifted Renilla reniformis luciferase variants for imaging in living subjects,” Nat. Med. 4, 641–643 (2007).

[CrossRef]

C. Wu and X. Tai, “Augmented lagrangian method, dual methods, and split Bregman iteration for ROF, vectorial TV, and high order models,” SIAM J. Imaging Sci. 3, 300–339 (2010).

[CrossRef]

C. Kuo, O. Coquoz, T. L. Troy, H. Xu, and B. W. Rice, “Three-dimensional reconstruction of in vivo bioluminescent sources based on multispectral imaging,” J. Biomed. Opt. 12, 024007 (2007).

[CrossRef]

C. Qin, J. Tian, X. Yang, J. Feng, K. Liu, J. Liu, G. Yan, S. Zhu, and M. Xu, “Adaptive improved element free Galerkin method for quasi- or multi-spectral bioluminescence tomography,” Opt. Express 17, 21925–21934 (2009).

[CrossRef]

Y. Lu, J. Tian, W. Cong, G. Wang, W. Yang, C. Qin, and M. Xu, “Spectrally resolved bioluminescence tomography with adaptive finite element analysis: methodology and simulation,” Phys. Med. Biol. 52, 4497–4512 (2007).

[CrossRef]

X. Ma, J. Tian, X. Yang, C. Qin, S. Zhu, and Z. Xue, “Research on liver tumor proliferation and angiogenesis based on multi-modality molecular imaging,” Acta Biophys. Sin. 27, 355–364 (2011).

[CrossRef]

X. Ma, J. Tian, C. Qin, X. Yang, B. Zhang, Z. Xue, X. Zhang, D. Han, D. Dong, and X. Liu, “Early detection of liver cancer based on bioluminescence tomography,” Appl. Opt. 50, 1389–1395 (2011).

[CrossRef]

C. Qin, J. Tian, X. Yang, J. Feng, K. Liu, J. Liu, G. Yan, S. Zhu, and M. Xu, “Adaptive improved element free Galerkin method for quasi- or multi-spectral bioluminescence tomography,” Opt. Express 17, 21925–21934 (2009).

[CrossRef]

J. Feng, K. Jia, C. Qin, G. Yan, S. Zhu, X. Zhang, J. Liu, and J. Tian, “Three-dimensional bioluminescence tomography based on Bayesian approach,” Opt. Express 17, 16834–16848 (2009).

[CrossRef]

J. Feng, K. Jia, G. Yan, S. Zhu, C. Qin, Y. Lv, and J. Tian, “An optimal permissible source region strategy for multispectral bioluminescence tomography,” Opt. Express 16, 15640–15654(2008).

[CrossRef]

J. Tian, J. Bai, X. Yan, S. Bao, Y. Li, W. Liang, and X. Yang, “Multimodality molecular imaging,” IEEE Eng. Med. Biol. Mag. 27(5), 48–57 (2008).

[CrossRef]

Y. Lu, J. Tian, W. Cong, G. Wang, W. Yang, C. Qin, and M. Xu, “Spectrally resolved bioluminescence tomography with adaptive finite element analysis: methodology and simulation,” Phys. Med. Biol. 52, 4497–4512 (2007).

[CrossRef]

Y. Lu, J. Tian, W. Cong, G. Wang, J. Luo, W. Yang, and H. Li, “A multilevel adaptive finite element algorithm for bioluminescence tomography,” Opt. Express 14, 8211–8223 (2006).

[CrossRef]

X. Ma, J. Tian, X. Yang, C. Qin, S. Zhu, and Z. Xue, “Research on liver tumor proliferation and angiogenesis based on multi-modality molecular imaging,” Acta Biophys. Sin. 27, 355–364 (2011).

[CrossRef]

X. Ma, J. Tian, C. Qin, X. Yang, B. Zhang, Z. Xue, X. Zhang, D. Han, D. Dong, and X. Liu, “Early detection of liver cancer based on bioluminescence tomography,” Appl. Opt. 50, 1389–1395 (2011).

[CrossRef]

D. Han, J. Tian, S. Zhu, J. Feng, C. Qin, B. Zhang, and X. Yang, “A fast reconstruction algorithm for fluorescence molecular tomography with sparsity regularization,” Opt. Express 18, 8630–8646 (2010).

[CrossRef]

K. Liu, J. Tian, X. Yang, Y. Lu, C. Qin, S. Zhu, and X. Zhang, “A fast bioluminescent source localization method based on generalized graph cuts with mouse model validations,” Opt. Express 18, 3732–3745 (2010).

[CrossRef]

B. Zhang, X. Yang, C. Qin, D. Liu, S. Zhu, J. Feng, L. Sun, K. Liu, D. Han, X. Ma, X. Zhang, J. Zhong, X. Li, X. Yang, and J. Tian, “A trust region method in adaptive finite element framework for bioluminescence tomography,” Opt. Express 18, 6477–6491 (2010).

[CrossRef]

K. Liu, J. Tian, Y. Lu, C. Qin, X. Yang, S. Zhu, and X. Zhang, “A fast bioluminescent source localization method based on generalized graph cuts with mouse model validations,” Opt. Express 18, 3732–3745 (2010).

[CrossRef]

B. Zhang, X. Yang, C. Qin, D. Liu, S. Zhu, J. Feng, L. Sun, K. Liu, D. Han, X. Ma, X. Zhang, J. Zhong, X. Li, X. Yang, and J. Tian, “A trust region method in adaptive finite element framework for bioluminescence tomography,” Opt. Express 18, 6477–6491 (2010).

[CrossRef]

C. Qin, J. Tian, X. Yang, J. Feng, K. Liu, J. Liu, G. Yan, S. Zhu, and M. Xu, “Adaptive improved element free Galerkin method for quasi- or multi-spectral bioluminescence tomography,” Opt. Express 17, 21925–21934 (2009).

[CrossRef]

J. Tian, J. Bai, X. Yan, S. Bao, Y. Li, W. Liang, and X. Yang, “Multimodality molecular imaging,” IEEE Eng. Med. Biol. Mag. 27(5), 48–57 (2008).

[CrossRef]

X. He, J. Liang, X. Wang, J. Yu, X. Qu, X. Wang, Y. Hou, D. Chen, F. Liu, and J. Tian, “Sparse reconstruction for quantitative bioluminescence tomography based on the incomplete variables truncated conjugate gradient method,” Opt. Express 18, 24825–24841 (2010).

[CrossRef]

X. Ma, J. Tian, C. Qin, X. Yang, B. Zhang, Z. Xue, X. Zhang, D. Han, D. Dong, and X. Liu, “Early detection of liver cancer based on bioluminescence tomography,” Appl. Opt. 50, 1389–1395 (2011).

[CrossRef]

D. Han, J. Tian, C. Qin, B. Zhang, K. Liu, and X. Ma, “A fast reconstruction method for fluorescence molecular tomography based on improved iterated shrinkage,” Proc. SPIE 7965, 79651C (2011).

[CrossRef]

D. Han, J. Tian, S. Zhu, J. Feng, C. Qin, B. Zhang, and X. Yang, “A fast reconstruction algorithm for fluorescence molecular tomography with sparsity regularization,” Opt. Express 18, 8630–8646 (2010).

[CrossRef]

B. Zhang, X. Yang, C. Qin, D. Liu, S. Zhu, J. Feng, L. Sun, K. Liu, D. Han, X. Ma, X. Zhang, J. Zhong, X. Li, X. Yang, and J. Tian, “A trust region method in adaptive finite element framework for bioluminescence tomography,” Opt. Express 18, 6477–6491 (2010).

[CrossRef]

X. Ma, J. Tian, C. Qin, X. Yang, B. Zhang, Z. Xue, X. Zhang, D. Han, D. Dong, and X. Liu, “Early detection of liver cancer based on bioluminescence tomography,” Appl. Opt. 50, 1389–1395 (2011).

[CrossRef]

K. Liu, J. Tian, Y. Lu, C. Qin, X. Yang, S. Zhu, and X. Zhang, “A fast bioluminescent source localization method based on generalized graph cuts with mouse model validations,” Opt. Express 18, 3732–3745 (2010).

[CrossRef]

K. Liu, J. Tian, X. Yang, Y. Lu, C. Qin, S. Zhu, and X. Zhang, “A fast bioluminescent source localization method based on generalized graph cuts with mouse model validations,” Opt. Express 18, 3732–3745 (2010).

[CrossRef]

B. Zhang, X. Yang, C. Qin, D. Liu, S. Zhu, J. Feng, L. Sun, K. Liu, D. Han, X. Ma, X. Zhang, J. Zhong, X. Li, X. Yang, and J. Tian, “A trust region method in adaptive finite element framework for bioluminescence tomography,” Opt. Express 18, 6477–6491 (2010).

[CrossRef]

J. Feng, K. Jia, C. Qin, G. Yan, S. Zhu, X. Zhang, J. Liu, and J. Tian, “Three-dimensional bioluminescence tomography based on Bayesian approach,” Opt. Express 17, 16834–16848 (2009).

[CrossRef]

Y. Lu, X. Zhang, A. Douraghy, D. Stout, J. Tian, T. F. Chan, and A. F. Chatziioannou, “Source reconstruction for spectrally-resolved bioluminescence tomography with sparse a priori information,” Opt. Express 17, 8062–8080 (2009).

[CrossRef]

B. Zhang, X. Yang, C. Qin, D. Liu, S. Zhu, J. Feng, L. Sun, K. Liu, D. Han, X. Ma, X. Zhang, J. Zhong, X. Li, X. Yang, and J. Tian, “A trust region method in adaptive finite element framework for bioluminescence tomography,” Opt. Express 18, 6477–6491 (2010).

[CrossRef]

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